RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 TRAT1Q6PIZ9 186 aa9.1□□□□□ -0.95
CHD4-202ENST00000430771 ZNF497Q6ZNH5 498 aa9.1□□□□□ -0.95
CHD4-202ENST00000430771 BIVMQ86UB2 503 aa9.1□□□□□ -0.95
CHD4-202ENST00000430771 CIARTQ8N365 385 aaPredicted RBP9.1□□□□□ -0.95
CHD4-202ENST00000430771 KIR3DL3Q8N743 410 aa9.1□□□□□ -0.95
CHD4-202ENST00000430771 TPRX1Q8N7U7 411 aa9.1□□□□□ -0.95
CHD4-202ENST00000430771 DIRAS2Q96HU8 199 aa9.1□□□□□ -0.95
CHD4-202ENST00000430771 ZNF714Q96N38 554 aa9.1□□□□□ -0.95
CHD4-202ENST00000430771 CMSS1Q9BQ75 279 aaKnown RBP9.1□□□□□ -0.95
CHD4-202ENST00000430771 GAL3ST2Q9H3Q3 398 aa9.1□□□□□ -0.95
CHD4-202ENST00000430771 C19orf12Q9NSK7 152 aa9.1□□□□□ -0.95
CHD4-202ENST00000430771 AK3Q9UIJ7 227 aa9.1□□□□□ -0.95
CHD4-202ENST00000430771 KIF25Q9UIL4 384 aa9.1□□□□□ -0.95
CHD4-202ENST00000430771 MGAT4AQ9UM21 535 aa9.1□□□□□ -0.95
CHD4-202ENST00000430771 UBE2J1Q9Y385 318 aaPredicted RBP9.1□□□□□ -0.95
CHD4-202ENST00000430771 VPS13CQ709C8 3753 aa9.1□□□□□ -0.95
CHD4-202ENST00000430771 OTOGQ6ZRI0 2925 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.09□□□□□ -0.951e-6■■■■□ 20.2
CHD4-202ENST00000430771 MALRD1Q5VYJ5 2156 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 hCG_1809904A0A1W2PP81 198 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 A0A1W2PPE2 198 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 A0A1W2PR64 198 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 A0A1W2PRV1 198 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 TMEM235A6NFC5 223 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 CTDSP2O14595 271 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 CD99P14209 185 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 FOSL1P15407 271 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 GLIPR1P48060 266 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 ZNF273Q14593 569 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 ZNF260Q3ZCT1 412 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 DCAF12L2Q5VW00 463 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 HACD4Q5VWC8 232 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 BRICD5Q6PL45 260 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 ZNF554Q86TJ5 538 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 IZUMO1Q8IYV9 350 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 GAPTQ8N292 157 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 OR4M1Q8NGD0 313 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 MRPL30Q8TCC3 161 aaKnown RBP9.09□□□□□ -0.95
CHD4-202ENST00000430771 DYRK2Q92630 601 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 MSI2Q96DH6 328 aaKnown RBP9.09□□□□□ -0.95
CHD4-202ENST00000430771 FAAP24Q9BTP7 215 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 MIXL1Q9H2W2 232 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 ZMAT3Q9HA38 289 aaKnown RBP9.09□□□□□ -0.95
CHD4-202ENST00000430771 HIF1ANQ9NWT6 349 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 TAS2R3Q9NYW6 316 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 ONECUT1Q9UBC0 465 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 TRAPPC2LQ9UL33 140 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 KCNS2Q9ULS6 477 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 INSIG2Q9Y5U4 225 aa9.09□□□□□ -0.95
CHD4-202ENST00000430771 MAP1AP78559 2803 aaPredicted RBP9.09□□□□□ -0.96
CHD4-202ENST00000430771 YLPM1P49750 1951 aaKnown RBP9.08□□□□□ -0.96
CHD4-202ENST00000430771 TRBV6-6A0A0A6YYG2 114 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 ZNF729A6NN14 1252 aaPredicted RBP9.08□□□□□ -0.96
CHD4-202ENST00000430771 J3QLI3 93 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 M0R1W7 72 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 CD5LO43866 347 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 NAPSAO96009 420 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 TGFAP01135 160 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 RBP4P02753 201 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 DTYMKP23919 212 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 CBX5P45973 191 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 MRPS10P82664 201 aaKnown RBP9.08□□□□□ -0.96
CHD4-202ENST00000430771 IL18Q14116 193 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 CDNFQ49AH0 187 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 METTL11BQ5VVY1 283 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 TCF23Q7RTU1 214 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 ZNF565Q8N9K5 539 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 LY6G5BQ8NDX9 201 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 OR4K15Q8NH41 348 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 SETD6Q8TBK2 473 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 MRGPRDQ8TDS7 321 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 DACT3Q96B18 629 aaPredicted RBP9.08□□□□□ -0.96
CHD4-202ENST00000430771 TMUB1Q9BVT8 246 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 AUNIPQ9H7T9 357 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 KCNIP1Q9NZI2 227 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 OPN4Q9UHM6 478 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 KCNK7Q9Y2U2 307 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 KPTNQ9Y664 436 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 ITPR3Q14573 2671 aa9.08□□□□□ -0.96
CHD4-202ENST00000430771 KIR2DS1A0A191URI9 304 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 ORC5O43913 435 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 MT-ND4P03905 459 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 MELTFP08582 738 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 FCGR3AP08637 254 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 ZNF728P0DKX0 622 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 KIR2DS4P43632 304 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 HLA-DRB3P79483 266 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 PAX2Q02962 417 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 KIR2DS1Q14954 304 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 TMEM30BQ3MIR4 351 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 SPANXN2Q5MJ10 180 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 OLFML2AQ68BL7 652 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 PYHIN1Q6K0P9 492 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 LINC00299Q6ZSB3 139 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 RTN4RL2Q86UN3 420 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 SNX29P2Q8IUI4 249 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 TEX29Q8N6K0 151 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 OR6Q1Q8NGQ2 317 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 OR13A1Q8NGR1 328 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 NUDCD2Q8WVJ2 157 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms