RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 SLC35E3Q7Z769 313 aa7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 GCNT2Q8N0V5 402 aa7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 ZNF441Q8N8Z8 693 aa7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 OR2G3Q8NGZ4 309 aa7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 OR4X1Q8NH49 305 aa7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 MSL2Q9HCI7 577 aa7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 STRAPQ9Y3F4 350 aaKnown RBP7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 IGHV1OR21-1A0A087WYE8 117 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 H3BMH7 237 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 M0R135 149 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 HSPB6O14558 160 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 ST8SIA3O43173 380 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 ZNHIT1O43257 154 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 DUX1O43812 170 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 DHRS3O75911 302 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 CYB5R3P00387 301 aaPredicted RBP7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 CTSDP07339 412 aaPredicted RBP7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 CHRNB4P30926 498 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 HOXC12P31275 282 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 CCKARP32238 428 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 CSNK1A1P48729 337 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 GRB2P62993 217 aaKnown RBP7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 CCL20P78556 96 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 PLPPR5Q32ZL2 321 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 SNAI3Q3KNW1 292 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 ZNF799Q96GE5 643 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 WFIKKN1Q96NZ8 548 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 HIST1H2AAQ96QV6 131 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 PNRC2Q9NPJ4 139 aaKnown RBP7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 SLC2A9Q9NRM0 540 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 FKBP11Q9NYL4 201 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 SH3BGRL2Q9UJC5 107 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 SLC7A11Q9UPY5 501 aa7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 POLR3KQ9Y2Y1 108 aaPredicted RBP7.15□□□□□ -1.27
CDC42SE1-201ENST00000357235 A0A1B0GW64 132 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 RBFOX3A6NFN3 312 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 ZNF705FA8MVS1 300 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 K7EP13 123 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 HSD17B6O14756 317 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 ZNF705DP0CH99 300 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 ZNF705BP0CI00 300 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 ALDH3B1P43353 468 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 NKAIN1Q4KMZ8 207 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 SLC25A26Q70HW3 274 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 FAM89BQ8N5H3 189 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 PRO3102Q9H379 93 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 ZNF442Q9H7R0 627 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 NAA60Q9H7X0 242 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 SEPSECSQ9HD40 501 aaKnown RBP7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 NECAP2Q9NVZ3 263 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 NPIPA2E9PIF3 369 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 NPIPA3F8WFD2 350 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 CLDN34H7C241 214 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 CCL25O15444 150 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 SSSCA1O60232 199 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 OR7C1O76099 320 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 LCATP04180 440 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 SPINK2P20155 84 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 P2RY1P47900 373 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 ELLP55199 621 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 HERV-K104P61576 105 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 COL10A1Q03692 680 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 RAET1LQ5VY80 246 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 SLC25A47Q6Q0C1 308 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 C17orf78Q8N4C9 275 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 GJC3Q8NFK1 279 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 OR1L6Q8NGR2 347 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 HAS2Q92819 552 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 ZNF837Q96EG3 531 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 UCN2Q96RP3 112 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 CABLES2Q9BTV7 478 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 ANAPC10Q9UM13 185 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 LIPGQ9Y5X9 500 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 TMEM238C9JI98 176 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 PPP5D1E7EU14 171 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 AQP7O14520 342 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 GPR137BO60478 399 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 TIAF1O95411 115 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 IGHEP01854 428 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 UMODP07911 640 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 FUT3P21217 361 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 MSR1P21757 451 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 DUSP1P28562 367 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 OR10J1P30954 320 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 RUNX1Q01196 453 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 COA6Q5JTJ3 125 aaKnown RBP7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 PHYHD1Q5SRE7 291 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 ANKRD37Q7Z713 158 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 LRP11Q86VZ4 500 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 MAML2Q8IZL2 1156 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 FBXL14Q8N1E6 418 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 RHBDD1Q8TEB9 315 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 CORO2AQ92828 525 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 BORCS8Q96FH0 119 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 OXGR1Q96P68 337 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 MIEN1Q9BRT3 115 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 ALKBH7Q9BT30 221 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 TUBD1Q9UJT1 453 aa7.14□□□□□ -1.27
CDC42SE1-201ENST00000357235 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.13□□□□□ -1.27
CDC42SE1-201ENST00000357235 B4DEV8 164 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms