RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 TLX3O43711 291 aaPredicted RBP6.82□□□□□ -1.32
VMA21-201ENST00000330374 CHST1O43916 411 aa6.82□□□□□ -1.32
VMA21-201ENST00000330374 PTBP3O95758 552 aaKnown RBP6.82□□□□□ -1.32
VMA21-201ENST00000330374 CD55P08174 381 aa6.82□□□□□ -1.32
VMA21-201ENST00000330374 MMP7P09237 267 aaPredicted RBP6.82□□□□□ -1.32
VMA21-201ENST00000330374 MSR1P21757 451 aa6.82□□□□□ -1.32
VMA21-201ENST00000330374 ADIRFQ15847 76 aa6.82□□□□□ -1.32
VMA21-201ENST00000330374 SNIP1Q8TAD8 396 aaKnown RBP6.82□□□□□ -1.32
VMA21-201ENST00000330374 KCNE4Q8WWG9 221 aa6.82□□□□□ -1.32
VMA21-201ENST00000330374 HIST1H2BLQ99880 126 aa6.82□□□□□ -1.32
VMA21-201ENST00000330374 TMEM50AO95807 157 aa6.82□□□□□ -1.32
VMA21-201ENST00000330374 PLPPR5Q32ZL2 321 aa6.82□□□□□ -1.32
VMA21-201ENST00000330374 TBC1D26Q86UD7 250 aa6.82□□□□□ -1.32
VMA21-201ENST00000330374 ZNF441Q8N8Z8 693 aa6.82□□□□□ -1.32
VMA21-201ENST00000330374 GJC3Q8NFK1 279 aa6.82□□□□□ -1.32
VMA21-201ENST00000330374 PIGCQ92535 297 aa6.82□□□□□ -1.32
VMA21-201ENST00000330374 TM2D1Q9BX74 207 aa6.82□□□□□ -1.32
VMA21-201ENST00000330374 EPOPA6NHQ4 379 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 CEBPZOSA8MTT3 80 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 IFNL4K9M1U5 179 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 MPPED1O15442 326 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 TUSC2O75896 110 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 PIAS2O75928 621 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 ELLP55199 621 aaPredicted RBP6.81□□□□□ -1.32
VMA21-201ENST00000330374 ERVS71-1P61550 626 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 ARL6IP1Q15041 203 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 OR8G1Q15617 311 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 SSC4DQ8WTU2 575 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 OIT3Q8WWZ8 545 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 SLC25A31Q9H0C2 315 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 VSIRQ9H7M9 311 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 PLEKHF2Q9H8W4 249 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 SLC7A10Q9NS82 523 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 PPYP01298 95 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 IFNA10P01566 189 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 FASLGP48023 281 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 CCDC71LQ8N9Z2 235 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 PP6455Q8WZ26 134 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 RCC1LQ96I51 464 aaKnown RBP6.81□□□□□ -1.32
VMA21-201ENST00000330374 A0A1B0GX78 115 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 IAPPP10997 89 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 CCL1P22362 96 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 RSPO1Q2MKA7 263 aaPredicted RBP6.81□□□□□ -1.32
VMA21-201ENST00000330374 ZNF774Q6NX45 483 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 OR4D5Q8NGN0 318 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 OR51H1Q8NH63 302 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 OR6X1Q8NH79 312 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 CLDND2Q8NHS1 167 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 OXGR1Q96P68 337 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 TMED3Q9Y3Q3 217 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 IGKV1-12A0A0C4DH73 117 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 A0A1W2PPC4 97 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 NPIPA2E9PIF3 369 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 NPIPA3F8WFD2 350 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 RRP8O43159 456 aaKnown RBP6.81□□□□□ -1.32
VMA21-201ENST00000330374 IGKV1D-12P01611 117 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 TLE4Q04727 773 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 MRPL14Q6P1L8 145 aaKnown RBP6.81□□□□□ -1.32
VMA21-201ENST00000330374 MOGAT3Q86VF5 341 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 GAPTQ8N292 157 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 BCO1Q9HAY6 547 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 DUSP13Q9UII6 198 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 LAMP3Q9UQV4 416 aa6.81□□□□□ -1.32
VMA21-201ENST00000330374 PRRC2CQ9Y520 2896 aaKnown RBP6.8□□□□□ -1.32
VMA21-201ENST00000330374 LRP4O75096 1905 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 TCAPO15273 167 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 CCNOP22674 350 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 TAS2R60P59551 318 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 CFHR1Q03591 330 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 TESK1Q15569 626 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 RAET1LQ5VY80 246 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 FIP1L1Q6UN15 594 aaKnown RBP6.8□□□□□ -1.32
VMA21-201ENST00000330374 BEND4Q6ZU67 534 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 TMEM37Q8WXS4 190 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 PLA2G3Q9NZ20 509 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 B4E171 279 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 TRDCB7Z8K6 153 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 CLDN34H7C241 214 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 TSPAN7P41732 249 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 ENDOGQ14249 297 aaKnown RBP6.8□□□□□ -1.32
VMA21-201ENST00000330374 PLCXD3Q63HM9 321 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 ZNF787Q6DD87 383 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 OSR2Q8N2R0 312 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 UBALD1Q8TB05 177 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 RPUSD4Q96CM3 377 aaKnown RBP6.8□□□□□ -1.32
VMA21-201ENST00000330374 GPR87Q9BY21 358 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 ULBP2Q9BZM5 246 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 A0A1W2PNV4 684 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 PITX3O75364 302 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 GRPP07492 148 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 NPBWR2P48146 333 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 IDH3GP51553 393 aaPredicted RBP6.8□□□□□ -1.32
VMA21-201ENST00000330374 RTL6Q6ICC9 239 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 SLC16A14Q7RTX9 510 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 ZNF100Q8IYN0 542 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 GPR137CQ8N3F9 429 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 D2HGDHQ8N465 521 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 MRGPRX4Q96LA9 322 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 HS3ST6Q96QI5 342 aa6.8□□□□□ -1.32
VMA21-201ENST00000330374 ELOA3CA0A087WX78 387 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms