RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ARHGDIBP52566 201 aa11.31□□□□□ -0.6
RPP40-201ENST00000319533 PRAMEF5Q5TYX0 476 aa11.31□□□□□ -0.6
RPP40-201ENST00000319533 XAF1Q6GPH4 301 aa11.31□□□□□ -0.6
RPP40-201ENST00000319533 C10orf99Q6UWK7 81 aa11.31□□□□□ -0.6
RPP40-201ENST00000319533 OR5D18Q8NGL1 313 aa11.31□□□□□ -0.6
RPP40-201ENST00000319533 CREB3L1Q96BA8 519 aa11.31□□□□□ -0.6
RPP40-201ENST00000319533 GAL3ST2Q9H3Q3 398 aa11.31□□□□□ -0.6
RPP40-201ENST00000319533 RHOFQ9HBH0 211 aa11.31□□□□□ -0.6
RPP40-201ENST00000319533 HMG20AQ9NP66 347 aa11.31□□□□□ -0.6
RPP40-201ENST00000319533 FUOMA2VDF0 154 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 OOSP1A8MZH6 123 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 PTGES3LE9PB15 166 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 BUB1B-PAK6H3BSN5 160 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 OGG1O15527 345 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 CSN2P05814 226 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 TMEM225BP0DP42 221 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 CDK2P24941 298 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 GDNFP39905 211 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 CEACAM3P40198 252 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 SNU13P55769 128 aaKnown RBP11.3□□□□□ -0.6
RPP40-201ENST00000319533 TAS2R43P59537 309 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 PPP3R1P63098 170 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 DOC2BQ14184 412 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 KISS1Q15726 138 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 HLA-DRB5Q30154 266 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 TPTE2P1Q5T6R2 138 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 ZNF773Q6PK81 442 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 ETV3LQ6ZN32 361 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 TRAPPC6BQ86SZ2 158 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 SAXO1Q8IYX7 474 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 TSPAN14Q8NG11 270 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 CAPSLQ8WWF8 208 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 RGP1Q92546 391 aaPredicted RBP11.3□□□□□ -0.6
RPP40-201ENST00000319533 TMEM106AQ96A25 262 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 GPER1Q99527 375 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 GPR61Q9BZJ8 451 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 ZNF286AQ9HBT8 521 aa11.3□□□□□ -0.6
RPP40-201ENST00000319533 KIAA2026Q5HYC2 2103 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 IGKV1-12A0A0C4DH73 117 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 FAM90A18PA6NE21 464 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 FAM90A16PA6NEW6 464 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 FAM90A20PA6NIJ5 464 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 FAM90A9PA6NNJ1 464 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 FAM90A12PA8MX19 464 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 FAM90A5PA8MXJ8 464 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 SH2D1BO14796 132 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 KDM4BO94953 1096 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 OR2H2O95918 312 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 IGKV1D-12P01611 117 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 CDK1P06493 297 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 FAM90A15PP0C7V4 464 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 FAM90A13PP0C7W8 464 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 FAM90A14PP0C7W9 464 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 FAM90A24PP0C7X0 464 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 MAP2K4P45985 399 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 YIF1BQ5BJH7 314 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 DEFB121Q5J5C9 76 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 SATL1Q86VE3 508 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 THNSL2Q86YJ6 484 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 OSR2Q8N2R0 312 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 GHSRQ92847 366 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 B9D2Q9BPU9 175 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 FAM192AQ9GZU8 254 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 EXOSC4Q9NPD3 245 aaKnown RBP11.29□□□□□ -0.6
RPP40-201ENST00000319533 SCN3BQ9NY72 215 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 TAS2R4Q9NYW5 299 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 CKLFQ9UBR5 152 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 BLOC1S6Q9UL45 172 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 ERGIC3Q9Y282 383 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 GSTK1Q9Y2Q3 226 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 TPRKBQ9Y3C4 175 aa11.29□□□□□ -0.6
RPP40-201ENST00000319533 ODAMA1E959 279 aa11.28□□□□□ -0.6
RPP40-201ENST00000319533 SH2D7A6NKC9 451 aaPredicted RBP11.28□□□□□ -0.6
RPP40-201ENST00000319533 SIRPB1O00241 398 aa11.28□□□□□ -0.6
RPP40-201ENST00000319533 RGS10O43665 173 aa11.28□□□□□ -0.6
RPP40-201ENST00000319533 LALBAP00709 142 aa11.28□□□□□ -0.6
RPP40-201ENST00000319533 CALCBP10092 127 aa11.28□□□□□ -0.6
RPP40-201ENST00000319533 C21orf33P30042 268 aaPredicted RBP11.28□□□□□ -0.6
RPP40-201ENST00000319533 GLIPR1P48060 266 aa11.28□□□□□ -0.6
RPP40-201ENST00000319533 WNT4P56705 351 aa11.28□□□□□ -0.6
RPP40-201ENST00000319533 AESQ08117 197 aa11.28□□□□□ -0.6
RPP40-201ENST00000319533 IRF3Q14653 427 aa11.28□□□□□ -0.6
RPP40-201ENST00000319533 DMKNQ6E0U4 476 aaPredicted RBP11.28□□□□□ -0.6
RPP40-201ENST00000319533 CCDC144NLQ6NUI1 221 aa11.28□□□□□ -0.6
RPP40-201ENST00000319533 ZNF529Q6P280 563 aa11.28□□□□□ -0.6
RPP40-201ENST00000319533 Q6P435 159 aa11.28□□□□□ -0.6
RPP40-201ENST00000319533 MRPL41Q8IXM3 137 aaKnown RBP11.28□□□□□ -0.6
RPP40-201ENST00000319533 SPARTQ8N0X7 666 aa11.28□□□□□ -0.6
RPP40-201ENST00000319533 ZFP41Q8N8Y5 198 aa11.28□□□□□ -0.6
RPP40-201ENST00000319533 COQ2Q96H96 371 aa11.28□□□□□ -0.6
RPP40-201ENST00000319533 MRPS26Q9BYN8 205 aaKnown RBP11.28□□□□□ -0.6
RPP40-201ENST00000319533 SIRT4Q9Y6E7 314 aaPredicted RBP11.28□□□□□ -0.6
RPP40-201ENST00000319533 A0A087WXM4 84 aa11.27□□□□□ -0.61
RPP40-201ENST00000319533 PSMB11A5LHX3 300 aa11.27□□□□□ -0.61
RPP40-201ENST00000319533 CGB3P0DN86 165 aa11.27□□□□□ -0.61
RPP40-201ENST00000319533 CGB7P0DN87 165 aa11.27□□□□□ -0.61
RPP40-201ENST00000319533 ZNF44P15621 663 aa11.27□□□□□ -0.61
RPP40-201ENST00000319533 SLC6A1P30531 599 aa11.27□□□□□ -0.61
RPP40-201ENST00000319533 HOXD3P31249 432 aaPredicted RBP11.27□□□□□ -0.61
RPP40-201ENST00000319533 MNDAP41218 407 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms