RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 PATE4P0C8F1 98 aa11.33□□□□□ -0.59
TRIM35-201ENST00000305364 ENDOGQ14249 297 aaKnown RBP11.33□□□□□ -0.59
TRIM35-201ENST00000305364 TMEM92Q6UXU6 159 aa11.33□□□□□ -0.59
TRIM35-201ENST00000305364 H1FOOQ8IZA3 346 aaPredicted RBP11.33□□□□□ -0.59
TRIM35-201ENST00000305364 SLC22A18ASQ8N1D0 253 aa11.33□□□□□ -0.59
TRIM35-201ENST00000305364 OR6X1Q8NH79 312 aa11.33□□□□□ -0.59
TRIM35-201ENST00000305364 PHF7Q9BWX1 381 aaPredicted RBP11.33□□□□□ -0.59
TRIM35-201ENST00000305364 SLC25A22Q9H936 323 aa11.33□□□□□ -0.59
TRIM35-201ENST00000305364 LYRM2Q9NU23 88 aaPredicted RBP11.33□□□□□ -0.59
TRIM35-201ENST00000305364 MMP17Q9ULZ9 603 aa11.33□□□□□ -0.59
TRIM35-201ENST00000305364 MYO7BQ6PIF6 2116 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 IGKV3-11P04433 115 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 SUMO3P55854 103 aaPredicted RBP11.33□□□□□ -0.6
TRIM35-201ENST00000305364 DMRTC2Q8IXT2 367 aaPredicted RBP11.33□□□□□ -0.6
TRIM35-201ENST00000305364 OR10G3Q8NGC4 313 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 RDH5Q92781 318 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 GOLT1BQ9Y3E0 138 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 TRAPPC1Q9Y5R8 145 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 KIR2DS1A0A191URI9 304 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 HS3ST1O14792 307 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 GCGP01275 180 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 KIR2DS4P43632 304 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 RPL19P84098 196 aaKnown RBP11.33□□□□□ -0.6
TRIM35-201ENST00000305364 COL10A1Q03692 680 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 KIR2DS1Q14954 304 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 C9orf135Q5VTT2 229 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 DBX2Q6ZNG2 339 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 RABEPKQ7Z6M1 372 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 Q96M66 194 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 GABRG3Q99928 467 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 CRISPLD2Q9H0B8 497 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 Q9N2K0 584 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 CCL28Q9NRJ3 127 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 RYDENQ9NUL5 291 aaKnown RBP11.33□□□□□ -0.6
TRIM35-201ENST00000305364 PPP1R3CQ9UQK1 317 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 FAM157AC9JC47 383 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 RAB4AP20338 218 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 IL15RAQ13261 267 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 JOSD1Q15040 202 aaPredicted RBP11.33□□□□□ -0.6
TRIM35-201ENST00000305364 FAM89BQ8N5H3 189 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 OR4X1Q8NH49 305 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 OR1L3Q8NH93 324 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 CLDND2Q8NHS1 167 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 TMEM222Q9H0R3 208 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 AURKAIP1Q9NWT8 199 aaPredicted RBP11.33□□□□□ -0.6
TRIM35-201ENST00000305364 SHANK1Q9Y566 2161 aa11.33□□□□□ -0.6
TRIM35-201ENST00000305364 A0A1W2PNV4 684 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 A0A1W2PPV4 95 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 HNF1AP20823 631 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 BMP5P22003 454 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 APLNRP35414 380 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 RPS16P62249 146 aaKnown RBP11.32□□□□□ -0.6
TRIM35-201ENST00000305364 UNQ6494/PRO21346Q6UXR6 183 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 MRPL21Q7Z2W9 205 aaKnown RBP11.32□□□□□ -0.6
TRIM35-201ENST00000305364 RPRMQ9NS64 109 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 RALGAPA1Q6GYQ0 2036 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 SVILO95425 2214 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 WDR1O75083 606 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 FAM78BQ5VT40 261 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 OR10J5Q8NHC4 309 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 ABHD5Q8WTS1 349 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 DUSP15Q9H1R2 295 aaPredicted RBP11.32□□□□□ -0.6
TRIM35-201ENST00000305364 CACNG5Q9UF02 275 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 KIAA1549LQ6ZVL6 1849 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 LOC102723971A0A1B0GUV8 181 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 LOC102725191A0A1B0GVB3 256 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 MDFIC2A0A1B0GVS7 189 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 MASP2O00187 686 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 RRP8O43159 456 aaKnown RBP11.32□□□□□ -0.6
TRIM35-201ENST00000305364 TUSC2O75896 110 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 GABRG2P18507 467 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 MRGPRGQ86SM5 289 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 OR56B2PQ8NGI1 322 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 MOB3AQ96BX8 217 aa11.32□□□□□ -0.6
TRIM35-201ENST00000305364 B4GALT1P15291 398 aa11.31□□□□□ -0.6
TRIM35-201ENST00000305364 CCKARP32238 428 aa11.31□□□□□ -0.6
TRIM35-201ENST00000305364 ZNF774Q6NX45 483 aa11.31□□□□□ -0.6
TRIM35-201ENST00000305364 RAB40CQ96S21 281 aa11.31□□□□□ -0.6
TRIM35-201ENST00000305364 OR51B6Q9H340 312 aa11.31□□□□□ -0.6
TRIM35-201ENST00000305364 PCP4P48539 62 aa11.31□□□□□ -0.6
TRIM35-201ENST00000305364 UBE2G2P60604 165 aa11.31□□□□□ -0.6
TRIM35-201ENST00000305364 OR5R1Q8NH85 324 aa11.31□□□□□ -0.6
TRIM35-201ENST00000305364 UBALD1Q8TB05 177 aa11.31□□□□□ -0.6
TRIM35-201ENST00000305364 RBM14Q96PK6 669 aaKnown RBP11.31□□□□□ -0.6
TRIM35-201ENST00000305364 UBE2ZQ9H832 354 aaPredicted RBP11.31□□□□□ -0.6
TRIM35-201ENST00000305364 TP53TG5Q9Y2B4 290 aa11.31□□□□□ -0.6
TRIM35-201ENST00000305364 THSD7BQ9C0I4 1608 aa11.31□□□□□ -0.6
TRIM35-201ENST00000305364 IGHV3-9P01782 118 aa11.31□□□□□ -0.6
TRIM35-201ENST00000305364 MYF5P13349 255 aa11.31□□□□□ -0.6
TRIM35-201ENST00000305364 IZUMO4Q1ZYL8 232 aa11.31□□□□□ -0.6
TRIM35-201ENST00000305364 MYPOPQ86VE0 399 aaPredicted RBP11.31□□□□□ -0.6
TRIM35-201ENST00000305364 LYPD6BQ8NI32 183 aa11.31□□□□□ -0.6
TRIM35-201ENST00000305364 PINX1Q96BK5 328 aaKnown RBP11.31□□□□□ -0.6
TRIM35-201ENST00000305364 ZDHHC11Q9H8X9 412 aa11.31□□□□□ -0.6
TRIM35-201ENST00000305364 CALHM2Q9HA72 323 aa11.31□□□□□ -0.6
TRIM35-201ENST00000305364 SHISA7A6NL88 538 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 AMBPP02760 352 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 CD27P26842 260 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 MDH2P40926 338 aaKnown RBP11.3□□□□□ -0.6
TRIM35-201ENST00000305364 HIST1H3AP68431 136 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms