RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 DSPPQ9NZW4 1301 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 OPN1MWP04001 364 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 OPN1MW2P0DN77 364 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 OPN1MW3P0DN78 364 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 COX5BP10606 129 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 S100A4P26447 101 aaKnown RBP15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 IL13RA2Q14627 380 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 ITLN1Q8WWA0 313 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 KCNE5Q9UJ90 142 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 ARID2Q68CP9 1835 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 MS4A18H0YCH9 400 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 MS4A18Q3C1V0 323 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 OR4A4PQ8NGN8 299 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 OR5M8Q8NGP6 311 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 RPS4Y2Q8TD47 263 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 RPL36A-HNRNPH2H7BZ11 118 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 ONECUT2O95948 504 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 CPN1P15169 458 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 PIGYQ3MUY2 71 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 MRPL22Q9NWU5 206 aaKnown RBP15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 IGKV3D-11A0A0A0MRZ8 115 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 C11orf87Q6NUJ2 197 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 SIGLEC12Q96PQ1 595 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 PIMREGQ9BSJ6 248 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 ZNF703Q9H7S9 590 aaPredicted RBP15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 ZNF629Q9UEG4 869 aaPredicted RBP15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 V9GYS6 101 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 DUS4LO95620 317 aaKnown RBP15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 C1QCP02747 245 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 ADRB1P08588 477 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 VSIG8P0DPA2 414 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 AESQ08117 197 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 ENDOGQ14249 297 aaKnown RBP15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 TRAV8-7A0A075B6U6 113 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 C9orf170A2RU37 121 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 CHEK1O14757 476 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 COL10A1Q03692 680 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 GGNBP1Q5YKI7 109 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 MRPL14Q6P1L8 145 aaKnown RBP15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 NFAM1Q8NET5 270 aaPredicted RBP15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 MARS2Q96GW9 593 aaKnown RBP15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 KCNK15Q9H427 330 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 AKIRIN1Q9H9L7 192 aaPredicted RBP15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 SPTBP11277 2137 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 ANKRD20A5PA0PJZ0 165 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 ALX3O95076 343 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 TNFSF10P50591 281 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 RPUSD4Q96CM3 377 aaKnown RBP15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 CCL13Q99616 98 aa15.4■□□□□ 0.06
CDC42EP3-201ENST00000295324 PPYP01298 95 aa15.39■□□□□ 0.05
CDC42EP3-201ENST00000295324 CD200P41217 278 aa15.39■□□□□ 0.05
CDC42EP3-201ENST00000295324 TEX30Q5JUR7 227 aa15.39■□□□□ 0.05
CDC42EP3-201ENST00000295324 SRXN1Q9BYN0 137 aa15.39■□□□□ 0.05
CDC42EP3-201ENST00000295324 OR5H1A6NKK0 313 aa15.39■□□□□ 0.05
CDC42EP3-201ENST00000295324 OR8G5Q8NG78 346 aa15.39■□□□□ 0.05
CDC42EP3-201ENST00000295324 DICER1Q9UPY3 1922 aaKnown RBP15.39■□□□□ 0.05
CDC42EP3-201ENST00000295324 BCL2L11O43521 198 aa15.39■□□□□ 0.05
CDC42EP3-201ENST00000295324 HARBI1Q96MB7 349 aa15.39■□□□□ 0.05
CDC42EP3-201ENST00000295324 ZNF714Q96N38 554 aa15.39■□□□□ 0.05
CDC42EP3-201ENST00000295324 FCER1GP30273 86 aa15.39■□□□□ 0.05
CDC42EP3-201ENST00000295324 FNDC7Q5VTL7 733 aa15.39■□□□□ 0.05
CDC42EP3-201ENST00000295324 BTNL8Q6UX41 500 aa15.39■□□□□ 0.05
CDC42EP3-201ENST00000295324 TBC1D26Q86UD7 250 aa15.39■□□□□ 0.05
CDC42EP3-201ENST00000295324 TMEM208Q9BTX3 173 aa15.39■□□□□ 0.05
CDC42EP3-201ENST00000295324 OR2W1Q9Y3N9 320 aa15.39■□□□□ 0.05
CDC42EP3-201ENST00000295324 CHCHD2Q9Y6H1 151 aaPredicted RBP15.39■□□□□ 0.05
CDC42EP3-201ENST00000295324 SLC31A2O15432 143 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 RECKO95980 971 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 ATP6V1FQ16864 119 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 FOXB2Q5VYV0 432 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 LIAT1Q6ZQX7 453 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 OR5R1Q8NH85 324 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 IMMP1LQ96LU5 166 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 ZNF107Q9UII5 783 aaPredicted RBP15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 ZNF320A2RRD8 509 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 CTDSPLO15194 276 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 RBM11P57052 281 aaKnown RBP15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 Q6ZT83 130 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 ABHD1Q96SE0 405 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 PRNDQ9UKY0 176 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 RAXQ9Y2V3 346 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 IGLV1-36A0A0B4J1U3 117 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 J3QR89 54 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 CD59P13987 128 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 NQO2P16083 231 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 ROM1Q03395 351 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 C19orf57Q0VDD7 668 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 RPL7L1Q6DKI1 246 aaKnown RBP15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 TVP23CQ96ET8 276 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 CHODLQ9H9P2 273 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 KLHDC2Q9Y2U9 406 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 ACACAQ13085 2346 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 SYNGR3O43761 229 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 GYPAP02724 150 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 CD1AP06126 327 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 DHRS9Q9BPW9 319 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 SMIM17P0DL12 118 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 MMDQ15546 238 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 SLC16A12Q6ZSM3 486 aa15.38■□□□□ 0.05
CDC42EP3-201ENST00000295324 SLC45A2Q9UMX9 530 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms