RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 HOXA6P31267 233 aa13.42□□□□□ -0.26
TIMP3-201ENST00000266085 BATFQ16520 125 aa13.42□□□□□ -0.26
TIMP3-201ENST00000266085 GUK1Q16774 197 aa13.42□□□□□ -0.26
TIMP3-201ENST00000266085 BTNL8Q6UX41 500 aa13.42□□□□□ -0.26
TIMP3-201ENST00000266085 PHYHIPLQ96FC7 376 aa13.42□□□□□ -0.26
TIMP3-201ENST00000266085 CCL28Q9NRJ3 127 aa13.42□□□□□ -0.26
TIMP3-201ENST00000266085 RALGAPA1Q6GYQ0 2036 aa13.42□□□□□ -0.26
TIMP3-201ENST00000266085 TMEM33P57088 247 aa13.42□□□□□ -0.26
TIMP3-201ENST00000266085 SLC35D1Q9NTN3 355 aa13.42□□□□□ -0.26
TIMP3-201ENST00000266085 ZMIZ1Q9ULJ6 1067 aa13.42□□□□□ -0.26
TIMP3-201ENST00000266085 ZNF835Q9Y2P0 537 aa13.42□□□□□ -0.26
TIMP3-201ENST00000266085 MTCL1Q9Y4B5 1905 aaKnown RBP13.41□□□□□ -0.26
TIMP3-201ENST00000266085 OPRK1P41145 380 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 AARDQ4LEZ3 155 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 C1orf174Q8IYL3 243 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 NDFIP1Q9BT67 221 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 RNASEK-C17orf49H0YIS7 233 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 SYNGR2O43760 224 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 IFITM3Q01628 133 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 HOGA1Q86XE5 327 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 OR5B3Q8NH48 314 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 OR2T6Q8NHC8 308 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 VSTM2AQ8TAG5 236 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 OR51I2Q9H344 312 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 PRR13Q9NZ81 148 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 NPIPB9F8W1W9 429 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 AKR1C3P42330 323 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 HLA-DRB3P79483 266 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 PJVKQ0ZLH3 352 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 TMEM88Q6PEY1 159 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 SSX8Q7RTT4 187 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 OR13D1Q8NGV5 346 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 LHFPL6Q9Y693 200 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 RBM11P57052 281 aaKnown RBP13.41□□□□□ -0.26
TIMP3-201ENST00000266085 UQCC3Q6UW78 93 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 ZNF519Q8TB69 540 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 ZNF488Q96MN9 340 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 GPR137Q96N19 417 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 OR2W1Q9Y3N9 320 aa13.41□□□□□ -0.26
TIMP3-201ENST00000266085 A0A1W2PN81 502 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 RPL36A-HNRNPH2H7BZ11 118 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 THY1P04216 161 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 ISG15P05161 165 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 RFPL3SP0C7P2 107 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 CHRNA7P36544 502 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 TMPRSS3P57727 454 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 LINC01590Q5TEZ4 76 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 NECAP1Q8NC96 275 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 SCMH1Q96GD3 660 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 ZNF665Q9H7R5 613 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 CA10Q9NS85 328 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 AMMECR1Q9Y4X0 333 aaPredicted RBP13.4□□□□□ -0.26
TIMP3-201ENST00000266085 A0A1W2PRD5 423 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 A0A1W2PRF3 423 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 A0A1W2PRM7 423 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 HLA-DQB1P01920 261 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 GABRA6Q16445 453 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 FFAR4Q5NUL3 377 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 WNT2BQ93097 391 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 AKR1E2Q96JD6 320 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 WSB1Q9Y6I7 421 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 PCNX1Q96RV3 2341 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 HNF1AP20823 631 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 UCP2P55851 309 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 CCL8P80075 99 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 CEACAM21Q3KPI0 293 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 BTNL3Q6UXE8 466 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 LINC00596Q86U02 117 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 ZBTB44Q8NCP5 570 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 SRXN1Q9BYN0 137 aa13.4□□□□□ -0.26
TIMP3-201ENST00000266085 CHCHD2Q9Y6H1 151 aaPredicted RBP13.4□□□□□ -0.26
TIMP3-201ENST00000266085 FBP1P09467 338 aa13.4□□□□□ -0.27
TIMP3-201ENST00000266085 RPL7L1Q6DKI1 246 aaKnown RBP13.4□□□□□ -0.27
TIMP3-201ENST00000266085 LAIR2Q6ISS4 152 aa13.4□□□□□ -0.27
TIMP3-201ENST00000266085 OR4A4PQ8NGN8 299 aa13.4□□□□□ -0.27
TIMP3-201ENST00000266085 A0A1W2PP11 408 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 NPIPB13A6NJU9 1138 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 NPIPB4C9JG80 1138 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 B3GALNT1O75752 331 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 OPN1MWP04001 364 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 OPN1MW2P0DN77 364 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 OPN1MW3P0DN78 364 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 F2RP25116 425 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 IL24Q13007 206 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 FLVCR1-AS1Q8TAF5 88 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 RNF122Q9H9V4 155 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 RNF24Q9Y225 148 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 R3HDM4Q96D70 268 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 SIGLEC12Q96PQ1 595 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 HDHD3Q9BSH5 251 aaPredicted RBP13.39□□□□□ -0.27
TIMP3-201ENST00000266085 SEBOXQ9HB31 216 aaPredicted RBP13.39□□□□□ -0.27
TIMP3-201ENST00000266085 KCNK7Q9Y2U2 307 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 HEATR5BQ9P2D3 2071 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 CDS2O95674 445 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 ETFRF1Q6IPR1 90 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 MRPL14Q6P1L8 145 aaKnown RBP13.39□□□□□ -0.27
TIMP3-201ENST00000266085 DYRK2Q92630 601 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 GUCD1Q96NT3 240 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 PKDREJQ9NTG1 2253 aa13.39□□□□□ -0.27
TIMP3-201ENST00000266085 A0A1W2PPQ1 181 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms