RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 F12P00748 615 aaPredicted RBP15.82■□□□□ 0.12
COL5A3-201ENST00000264828 WNT5AP41221 380 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 FAHD2BQ6P2I3 314 aaPredicted RBP15.82■□□□□ 0.12
COL5A3-201ENST00000264828 WDR34Q96EX3 536 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 FAHD2AQ96GK7 314 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 ASCL3Q9NQ33 180 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 COL8A1P27658 744 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 CEBPDP49716 269 aaPredicted RBP15.82■□□□□ 0.12
COL5A3-201ENST00000264828 ANKRD55Q3KP44 614 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 TMEM92Q6UXU6 159 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 SLC25A42Q86VD7 318 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 OR6X1Q8NH79 312 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 SMOC1Q9H4F8 434 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 FOCADQ5VW36 1801 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 APCSP02743 223 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 TMIGD3P0DMS9 266 aaPredicted RBP15.82■□□□□ 0.12
COL5A3-201ENST00000264828 LILRA6Q6PI73 481 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 LRRC75AQ8NAA5 344 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 WNT16Q9UBV4 365 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 SSPNQ14714 243 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 STARD4Q96DR4 205 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 TMSB15BA0A087X1C1 80 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 HELTA6NFD8 242 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 BHLHA15Q7RTS1 189 aaPredicted RBP15.82■□□□□ 0.12
COL5A3-201ENST00000264828 MIOXQ9UGB7 285 aa15.82■□□□□ 0.12
COL5A3-201ENST00000264828 IGHV3OR15-7A0A075B7D8 119 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 CDIPTO14735 213 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 MT-CO3P00414 261 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 RBPMS2Q6ZRY4 209 aaKnown RBP15.81■□□□□ 0.12
COL5A3-201ENST00000264828 MUC15Q8N387 334 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 AREGP15514 252 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 RCC1P18754 421 aaPredicted RBP15.81■□□□□ 0.12
COL5A3-201ENST00000264828 SRD5A2P31213 254 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 MOGAT3Q86VF5 341 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 TUSC5Q8IXB3 177 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 DEFB124Q8NES8 71 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 GPBAR1Q8TDU6 330 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 SNURFLB1AK76 121 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 MDKP21741 143 aaPredicted RBP15.81■□□□□ 0.12
COL5A3-201ENST00000264828 ZNF841Q6ZN19 808 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 NPAS1Q99742 590 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 ANGPTL4Q9BY76 406 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 R4GN57 208 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 HRKO00198 91 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 OR10J1P30954 320 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 LGALS7P47929 136 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 SKP2Q13309 424 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 COL19A1Q14993 1142 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 BHLHA9Q7RTU4 235 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 OR5A2Q8NGI9 324 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 CA10Q9NS85 328 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 LOC389332A0A1B0GUA5 103 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 IGSF23A1L1A6 192 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 GNG7O60262 68 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 PPYP01298 95 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 HERVK_113P61574 105 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 SRSF9Q13242 221 aaKnown RBP eCLIP15.81■□□□□ 0.12
COL5A3-201ENST00000264828 ZIC1Q15915 447 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 TMEM255AQ5JRV8 349 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 OR4X1Q8NH49 305 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 PCED1AQ9H1Q7 454 aa15.81■□□□□ 0.12
COL5A3-201ENST00000264828 SOX8P57073 446 aa15.8■□□□□ 0.12
COL5A3-201ENST00000264828 RIGQ13278 110 aa15.8■□□□□ 0.12
COL5A3-201ENST00000264828 C10orf113Q5VZT2 155 aa15.8■□□□□ 0.12
COL5A3-201ENST00000264828 ZNF71Q9NQZ8 489 aaPredicted RBP15.8■□□□□ 0.12
COL5A3-201ENST00000264828 COL11A2P13942 1736 aaPredicted RBP15.8■□□□□ 0.12
COL5A3-201ENST00000264828 MGAT2Q10469 447 aa15.8■□□□□ 0.12
COL5A3-201ENST00000264828 KLF9Q13886 244 aaPredicted RBP15.8■□□□□ 0.12
COL5A3-201ENST00000264828 MPC1Q9Y5U8 109 aa15.8■□□□□ 0.12
COL5A3-201ENST00000264828 TRAV8-7A0A075B6U6 113 aa15.8■□□□□ 0.12
COL5A3-201ENST00000264828 PSG2P11465 335 aa15.8■□□□□ 0.12
COL5A3-201ENST00000264828 OPN4Q9UHM6 478 aa15.8■□□□□ 0.12
COL5A3-201ENST00000264828 EFNB2P52799 333 aa15.8■□□□□ 0.12
COL5A3-201ENST00000264828 HDHD3Q9BSH5 251 aaPredicted RBP15.8■□□□□ 0.12
COL5A3-201ENST00000264828 IGHV1OR15-9A0A0B4J2B8 117 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 CEACAM3P40198 252 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 C16orf82Q7Z2V1 217 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 ATG4DQ86TL0 474 aaPredicted RBP15.79■□□□□ 0.12
COL5A3-201ENST00000264828 SLC25A30Q5SVS4 291 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 SLC35E3Q7Z769 313 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 RCC2Q9P258 522 aaKnown RBP15.79■□□□□ 0.12
COL5A3-201ENST00000264828 TINAGQ9UJW2 476 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 VSIG4Q9Y279 399 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 PRRC2BQ5JSZ5 2229 aaKnown RBP15.79■□□□□ 0.12
COL5A3-201ENST00000264828 RTP5Q14D33 572 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 C1orf210Q8IVY1 113 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 LIPT2A6NK58 231 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 TRA2AQ13595 282 aaKnown RBP eCLIP15.79■□□□□ 0.12
COL5A3-201ENST00000264828 LYPD8Q6UX82 237 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 CRISPLD2Q9H0B8 497 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 IL9P15248 144 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 SRP14P37108 136 aaKnown RBP15.79■□□□□ 0.12
COL5A3-201ENST00000264828 MPLP40238 635 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 TMEM50BP56557 158 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 CT55Q8WUE5 264 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 OR4C12Q96R67 309 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 RASL11BQ9BPW5 248 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 SOSTQ9BQB4 213 aa15.79■□□□□ 0.12
COL5A3-201ENST00000264828 QSER1Q2KHR3 1735 aa15.78■□□□□ 0.12
COL5A3-201ENST00000264828 MAGEA5P43359 124 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms