RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 TFF1P04155 84 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 OR3A1P47881 315 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 TMEM50BP56557 158 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 GNB2P62879 340 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 GRK1Q15835 563 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 ZNF841Q6ZN19 808 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 Q6ZTK2 550 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 BIVMQ86UB2 503 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 LYSMD2Q8IV50 215 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 MINDY2Q8NBR6 621 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 WFDC11Q8NEX6 87 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 TMEM185AQ8NFB2 350 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 C15orf40Q8WUR7 153 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 RAB3CQ96E17 227 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 DPCDQ9BVM2 203 aaPredicted RBP9.69□□□□□ -0.86
CDRT1-207ENST00000583965 SSBP3Q9BWW4 388 aaPredicted RBP9.69□□□□□ -0.86
CDRT1-207ENST00000583965 SHARPINQ9H0F6 387 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.69□□□□□ -0.86
CDRT1-207ENST00000583965 PLEKHJ1Q9NW61 149 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 CLN8Q9UBY8 286 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 METRNQ9UJH8 293 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 A0A1B0GW55 424 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 SERPINE3A8MV23 424 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 A8MXK9 166 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 RNF223E7ERA6 249 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 CA11O75493 328 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 ECDO95905 644 aaPredicted RBP9.68□□□□□ -0.86
CDRT1-207ENST00000583965 GSTP1P09211 210 aaKnown RBP9.68□□□□□ -0.86
CDRT1-207ENST00000583965 DUX4L2P0CJ85 424 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 DUX4L3P0CJ86 424 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 DUX4L4P0CJ87 422 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 DUX4L5P0CJ88 424 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 DUX4L6P0CJ89 424 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 DUX4L7P0CJ90 424 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 SELLP14151 372 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 HIST1H1DP16402 221 aaKnown RBP9.68□□□□□ -0.86
CDRT1-207ENST00000583965 CDK2P24941 298 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 ERP29P30040 261 aaKnown RBP9.68□□□□□ -0.86
CDRT1-207ENST00000583965 PITPNAQ00169 270 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 IL18Q14116 193 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 MOGAT2Q3SYC2 334 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 NKAPLQ5M9Q1 402 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 HACD4Q5VWC8 232 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 CD276Q5ZPR3 534 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 WDR25Q64LD2 544 aaPredicted RBP9.68□□□□□ -0.86
CDRT1-207ENST00000583965 DUX4L9Q6RFH8 374 aaPredicted RBP9.68□□□□□ -0.86
CDRT1-207ENST00000583965 GDPD3Q7L5L3 318 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 OR4S1Q8NGB4 309 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 SETD6Q8TBK2 473 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 NEK7Q8TDX7 302 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 CHPT1Q8WUD6 406 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 C1orf159Q96HA4 380 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 ARHGAP5-AS1Q96IT6 56 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 PECRQ9BY49 303 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 CHST6Q9GZX3 395 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 PPA2Q9H2U2 334 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 NCOR1P1Q9H4R4 102 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 ZNF581Q9P0T4 197 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 DUX4Q9UBX2 424 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 LPAR3Q9UBY5 353 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 ITGB1BP2Q9UKP3 347 aa9.68□□□□□ -0.86
CDRT1-207ENST00000583965 TRBV23-1A0A0A0MS06 115 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 H7C1Q1 480 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 HSPB6O14558 160 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 GSTZ1O43708 216 aaPredicted RBP9.67□□□□□ -0.86
CDRT1-207ENST00000583965 FOXH1O75593 365 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 IL7P13232 177 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 NDUFB7P17568 137 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 MRPS10P82664 201 aaKnown RBP9.67□□□□□ -0.86
CDRT1-207ENST00000583965 BAK1Q16611 211 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 PNLIPRP3Q17RR3 467 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 RGS21Q2M5E4 152 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 ZNF260Q3ZCT1 412 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 PYDC2Q56P42 97 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 PLAC9Q5JTB6 97 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 TMEM69Q5SWH9 247 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 STEAP3Q658P3 488 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 SLC35E4Q6ICL7 350 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 C6orf201Q7Z4U5 140 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 BPIFB2Q8N4F0 458 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 ST8SIA4Q92187 359 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 DMRTB1Q96MA1 342 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 SULT4A1Q9BR01 284 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 RIMS4Q9H426 269 aaPredicted RBP9.67□□□□□ -0.86
CDRT1-207ENST00000583965 ABCB10Q9NRK6 738 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 ETAA1Q9NY74 926 aa9.67□□□□□ -0.86
CDRT1-207ENST00000583965 POLR3KQ9Y2Y1 108 aaPredicted RBP9.67□□□□□ -0.86
CDRT1-207ENST00000583965 TRAV18A0A075B6X5 111 aa9.66□□□□□ -0.86
CDRT1-207ENST00000583965 A0A0G2JMP0 313 aa9.66□□□□□ -0.86
CDRT1-207ENST00000583965 A0A0X1KG70 313 aa9.66□□□□□ -0.86
CDRT1-207ENST00000583965 POM121CA8CG34 1229 aa9.66□□□□□ -0.86
CDRT1-207ENST00000583965 MFNGO00587 321 aa9.66□□□□□ -0.86
CDRT1-207ENST00000583965 FCN3O75636 299 aa9.66□□□□□ -0.86
CDRT1-207ENST00000583965 MELTFP08582 738 aa9.66□□□□□ -0.86
CDRT1-207ENST00000583965 GNB3P16520 340 aa9.66□□□□□ -0.86
CDRT1-207ENST00000583965 IL2RGP31785 369 aa9.66□□□□□ -0.86
CDRT1-207ENST00000583965 DEFA1P59665 94 aa9.66□□□□□ -0.86
CDRT1-207ENST00000583965 DEFA3P59666 94 aa9.66□□□□□ -0.86
CDRT1-207ENST00000583965 SEC61A1P61619 476 aaKnown RBP9.66□□□□□ -0.86
CDRT1-207ENST00000583965 MEF2CQ06413 473 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms