RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 TFF1P04155 84 aa15.19■□□□□ 0.02
COMMD4-208ENST00000563220 SERPINF1P36955 418 aa15.19■□□□□ 0.02
COMMD4-208ENST00000563220 GATA4P43694 442 aa15.19■□□□□ 0.02
COMMD4-208ENST00000563220 NPY4RP50391 375 aa15.19■□□□□ 0.02
COMMD4-208ENST00000563220 RBM39Q14498 530 aaKnown RBP15.19■□□□□ 0.02
COMMD4-208ENST00000563220 PAN3Q58A45 887 aaKnown RBP15.19■□□□□ 0.02
COMMD4-208ENST00000563220 C6orf183Q5T699 404 aa15.19■□□□□ 0.02
COMMD4-208ENST00000563220 GCSAMQ8N6F7 178 aa15.19■□□□□ 0.02
COMMD4-208ENST00000563220 ZDHHC22Q8N966 263 aa15.19■□□□□ 0.02
COMMD4-208ENST00000563220 OR10Z1Q8NGY1 313 aa15.19■□□□□ 0.02
COMMD4-208ENST00000563220 MRPL30Q8TCC3 161 aaKnown RBP15.19■□□□□ 0.02
COMMD4-208ENST00000563220 LIME1Q9H400 295 aa15.19■□□□□ 0.02
COMMD4-208ENST00000563220 NPTNQ9Y639 398 aa15.19■□□□□ 0.02
COMMD4-208ENST00000563220 IGSF10Q6WRI0 2623 aa15.19■□□□□ 0.02
COMMD4-208ENST00000563220 OR5H14A6NHG9 310 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 SRRM5B3KS81 715 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-208ENST00000563220 ZNF205O95201 554 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 OR5H8P0DN80 308 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 BEX5Q5H9J7 111 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 ZNF626Q68DY1 528 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 ZNF660Q6AZW8 331 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-208ENST00000563220 FIP1L1Q6UN15 594 aaKnown RBP15.18■□□□□ 0.02
COMMD4-208ENST00000563220 Q6ZS49 121 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 TMEM17Q86X19 198 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 ZCCHC24Q8N2G6 241 aaKnown RBP15.18■□□□□ 0.02
COMMD4-208ENST00000563220 PLPPR1Q8TBJ4 325 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 RFPL4AA6NLU0 287 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 CEACAM18A8MTB9 384 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 C17orf100A8MU93 164 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 SNRPGP15A8MWD9 76 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 VSTM5A8MXK1 200 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 RFPL4AL1F8VTS6 287 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 SSNA1O43805 119 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 PSPNO60542 156 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 KNG1P01042 644 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 LHBP01229 141 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 OR4E1P0C645 316 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 LMO1P25800 156 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 SRSF7Q16629 238 aaKnown RBP eCLIP15.18■□□□□ 0.02
COMMD4-208ENST00000563220 OR5T2Q8NGG2 359 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 LILRB1Q8NHL6 650 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-208ENST00000563220 ITLN2Q8WWU7 325 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-208ENST00000563220 RIMS4Q9H426 269 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-208ENST00000563220 GPN1Q9HCN4 374 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-208ENST00000563220 GCM1Q9NP62 436 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 MYOZ1Q9NP98 299 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-208ENST00000563220 NECAP2Q9NVZ3 263 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 ZNF69Q9UC07 566 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 GPR132Q9UNW8 380 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 HIVEP3Q5T1R4 2406 aa15.18■□□□□ 0.02
COMMD4-208ENST00000563220 TRBV6-6A0A0A6YYG2 114 aa15.17■□□□□ 0.02
COMMD4-208ENST00000563220 DEFB108AA8MXU0 73 aa15.17■□□□□ 0.02
COMMD4-208ENST00000563220 CXCL3P19876 107 aa15.17■□□□□ 0.02
COMMD4-208ENST00000563220 LOXP28300 417 aaPredicted RBP15.17■□□□□ 0.02
COMMD4-208ENST00000563220 SMIM21Q3B7S5 101 aa15.17■□□□□ 0.02
COMMD4-208ENST00000563220 DHRS11Q6UWP2 260 aa15.17■□□□□ 0.02
COMMD4-208ENST00000563220 SLC25A42Q86VD7 318 aa15.17■□□□□ 0.02
COMMD4-208ENST00000563220 BOLLQ8N9W6 283 aaKnown RBP15.17■□□□□ 0.02
COMMD4-208ENST00000563220 ADAD2Q8NCV1 583 aaKnown RBP15.17■□□□□ 0.02
COMMD4-208ENST00000563220 ZNF2Q9BSG1 426 aaPredicted RBP15.17■□□□□ 0.02
COMMD4-208ENST00000563220 TMPRSS13Q9BYE2 586 aa15.17■□□□□ 0.02
COMMD4-208ENST00000563220 RASL12Q9NYN1 266 aa15.17■□□□□ 0.02
COMMD4-208ENST00000563220 GLS2Q9UI32 602 aa15.17■□□□□ 0.02
COMMD4-208ENST00000563220 METRNQ9UJH8 293 aa15.17■□□□□ 0.02
COMMD4-208ENST00000563220 ZNF222Q9UK12 451 aa15.17■□□□□ 0.02
COMMD4-208ENST00000563220 RNF115Q9Y4L5 304 aa15.17■□□□□ 0.02
COMMD4-208ENST00000563220 CHD3Q12873 2000 aaKnown RBP15.17■□□□□ 0.02
COMMD4-208ENST00000563220 CREBL2O60519 120 aaPredicted RBP15.16■□□□□ 0.02
COMMD4-208ENST00000563220 ADH4P08319 380 aa15.16■□□□□ 0.02
COMMD4-208ENST00000563220 SCTP09683 121 aa15.16■□□□□ 0.02
COMMD4-208ENST00000563220 TNFSF4P23510 183 aa15.16■□□□□ 0.02
COMMD4-208ENST00000563220 CCL8P80075 99 aa15.16■□□□□ 0.02
COMMD4-208ENST00000563220 MST1LQ2TV78 715 aa15.16■□□□□ 0.02
COMMD4-208ENST00000563220 C4orf46Q504U0 113 aa15.16■□□□□ 0.02
COMMD4-208ENST00000563220 IGSF11Q5DX21 431 aa15.16■□□□□ 0.02
COMMD4-208ENST00000563220 SHEQ5VZ18 495 aa15.16■□□□□ 0.02
COMMD4-208ENST00000563220 ZNF880Q6PDB4 577 aa15.16■□□□□ 0.02
COMMD4-208ENST00000563220 MUC20Q8N307 709 aaPredicted RBP15.16■□□□□ 0.02
COMMD4-208ENST00000563220 ZNF431Q8TF32 576 aaPredicted RBP15.16■□□□□ 0.02
COMMD4-208ENST00000563220 CCDC107Q8WV48 283 aa15.16■□□□□ 0.02
COMMD4-208ENST00000563220 TREM2Q9NZC2 230 aa15.16■□□□□ 0.02
COMMD4-208ENST00000563220 CLDN14O95500 239 aa15.16■□□□□ 0.02
COMMD4-208ENST00000563220 PSG2P11465 335 aa15.16■□□□□ 0.02
COMMD4-208ENST00000563220 RCC1P18754 421 aaPredicted RBP15.16■□□□□ 0.02
COMMD4-208ENST00000563220 APOBEC3AP31941 199 aaPredicted RBP15.16■□□□□ 0.02
COMMD4-208ENST00000563220 ATXN7L3Q14CW9 347 aaPredicted RBP15.16■□□□□ 0.02
COMMD4-208ENST00000563220 ZNF497Q6ZNH5 498 aa15.16■□□□□ 0.02
COMMD4-208ENST00000563220 PEG10Q86TG7 708 aaKnown RBP15.16■□□□□ 0.02
COMMD4-208ENST00000563220 TGIF2LYQ8IUE0 185 aa15.16■□□□□ 0.02
COMMD4-208ENST00000563220 CD177Q8N6Q3 437 aa15.16■□□□□ 0.02
COMMD4-208ENST00000563220 BBC3Q96PG8 261 aaPredicted RBP15.16■□□□□ 0.02
COMMD4-208ENST00000563220 C5orf66Q9H5L9 145 aa15.16■□□□□ 0.02
COMMD4-208ENST00000563220 CISD1Q9NZ45 108 aaKnown RBP15.16■□□□□ 0.02
COMMD4-208ENST00000563220 CFAP46Q8IYW2 2715 aa15.15■□□□□ 0.02
COMMD4-208ENST00000563220 M0R233 179 aa15.15■□□□□ 0.02
COMMD4-208ENST00000563220 CD55P08174 381 aa15.15■□□□□ 0.02
COMMD4-208ENST00000563220 FPR2P25090 351 aa15.15■□□□□ 0.02
COMMD4-208ENST00000563220 MDH2P40926 338 aaKnown RBP15.15■□□□□ 0.02
COMMD4-208ENST00000563220 HTR2BP41595 481 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms