RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 OR11H4Q8NGC9 324 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 OR8B12Q8NGG6 310 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 OR4A4PQ8NGN8 299 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 OR1L3Q8NH93 324 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 MRPL30Q8TCC3 161 aaKnown RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 MRPS2Q9Y399 296 aaKnown RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 SIRT4Q9Y6E7 314 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 C7orf66A4D0T2 115 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 ALG1L2C9J202 215 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 CRXO43186 299 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 SP1P08047 785 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 ZNF32P17041 273 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 SCAND1P57086 179 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 FAM3BP58499 235 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 GNB2P62879 340 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 SRSF9Q13242 221 aaKnown RBP eCLIP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 SURF2Q15527 256 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 RGS7BPQ6MZT1 257 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 OR1B1Q8NGR6 318 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 MAFAQ8NHW3 353 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 NT5CQ8TCD5 201 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 APOBEC3DQ96AK3 386 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 GNRHR2Q96P88 292 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 ANGPTL4Q9BY76 406 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 GHITMQ9H3K2 345 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 PPP1R3EQ9H7J1 279 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 SH2D2AQ9NP31 389 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 CCL28Q9NRJ3 127 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 HDGFL3Q9Y3E1 203 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 TRAV39A0A0B4J263 110 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 SRSF10O75494 262 aaKnown RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 MBPP02686 304 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 CT62P0C5K7 136 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 OTX1P32242 354 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 CAPZBP47756 277 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 GNG3P63215 75 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 ANKRD33Q7Z3H0 272 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 OR2Z1Q8NG97 314 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 RAB24Q969Q5 203 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 RAB37Q96AX2 223 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 COL11A2P13942 1736 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 GAGE10A6NGK3 116 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 ITGBL1O95965 494 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 CD27P26842 260 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 LYZP61626 148 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 TGIF1Q15583 401 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 Q5BKY6 102 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 WIPI1Q5MNZ9 446 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 SLC35E3Q7Z769 313 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 LINC01555Q8NAE3 123 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 C5orf17Q8NAS9 161 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 OR52L2PQ8NGH6 319 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 EID2BQ96D98 161 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 LINC00615Q96LM1 132 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 GPA33Q99795 319 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 LRRC37AA6NMS7 1700 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 TAF1LQ8IZX4 1826 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 LOC389332A0A1B0GUA5 103 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 CTSVO60911 334 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 MEOX1P50221 254 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 ZNF343Q6P1L6 599 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 SGMS2Q8NHU3 365 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 ATG101Q9BSB4 218 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 HDHD3Q9BSH5 251 aaPredicted RBP6.73□□□□□ -1.33
CTNND1-223ENST00000529986 PCGF1Q9BSM1 259 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 J3KRW8 73 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 PLP1P60201 277 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 CD226Q15762 336 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 PRICKLE4Q2TBC4 344 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 HLA-BQ31612 363 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 MESTQ5EB52 335 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 OR2V1Q8NHB1 315 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 SPPL3Q8TCT6 385 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 DDA1Q9BW61 102 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 SNCGO76070 127 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 ZNF260Q3ZCT1 412 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 LYRM7Q5U5X0 104 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 MRGPRGQ86SM5 289 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 KCNE4Q8WWG9 221 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 FAM117AQ9C073 453 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 KLK13Q9UKR3 277 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 SCN9AQ15858 1988 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 SBF2Q86WG5 1849 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 TMSB15BA0A087X1C1 80 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 CA2P00918 260 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 NPEPL1Q8NDH3 523 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 MRGPRFQ96AM1 343 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 TMEM56Q96MV1 263 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 OCIAD1Q9NX40 245 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 FLRT3Q9NZU0 649 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 STARD10Q9Y365 291 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 H0YL77 283 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 CORTO00230 105 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 CYR61O00622 381 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 P01737 135 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 FAM53BQ14153 422 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 PABPC1L2AQ5JQF8 200 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 RFLNBQ8N5W9 214 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 ST6GALNAC3Q8NDV1 305 aa6.73□□□□□ -1.33
CTNND1-223ENST00000529986 PROCRQ9UNN8 238 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms