RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 MGST3O14880 152 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 MAGEB4O15481 346 aaPredicted RBP4.31□□□□□ -1.72
COL4A3-206ENST00000487633 SPRY2O43597 315 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 SELENOFO60613 162 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 OR2H2O95918 312 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 IGKV1D-12P01611 117 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 RBMY1CP0DJD4 496 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 SPI1P17947 270 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 CFL1P23528 166 aaKnown RBP4.31□□□□□ -1.72
COL4A3-206ENST00000487633 ERP29P30040 261 aaKnown RBP4.31□□□□□ -1.72
COL4A3-206ENST00000487633 HTR1FP30939 366 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 SLC6A6P31641 620 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 FCGR2BP31994 310 aaPredicted RBP4.31□□□□□ -1.72
COL4A3-206ENST00000487633 SSTR5P35346 364 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 PTGFRP43088 359 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 SLC15A1P46059 708 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 RAB7AP51149 207 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 ALDH3A2P51648 485 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 RAB40BQ12829 278 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 SF3A3Q12874 501 aaKnown RBP eCLIP4.31□□□□□ -1.72
COL4A3-206ENST00000487633 IL24Q13007 206 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 KLF10Q13118 480 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 MADCAM1Q13477 382 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 GALEQ14376 348 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 ATXN7L3Q14CW9 347 aaPredicted RBP4.31□□□□□ -1.72
COL4A3-206ENST00000487633 UBE2V2Q15819 145 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 LCN12Q6JVE5 192 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 Q6ZR54 194 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 C5orf24Q7Z6I8 188 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 ERI1Q8IV48 349 aaKnown RBP4.31□□□□□ -1.72
COL4A3-206ENST00000487633 OR8H3Q8N146 312 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 Q8N402 240 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 FAM86B1Q8N7N1 296 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 OR6K6Q8NGW6 343 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 OR2T10Q8NGZ9 312 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 FAM81AQ8TBF8 368 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 EMG1Q92979 244 aaKnown RBP4.31□□□□□ -1.72
COL4A3-206ENST00000487633 HSH2DQ96JZ2 352 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 DHRS1Q96LJ7 313 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 CEP19Q96LK0 163 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 LRGUKQ96M69 825 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 C18orf15Q96N68 181 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 MBOAT4Q96T53 435 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 SIKE1Q9BRV8 207 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 OSBPL10Q9BXB5 764 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 ANKRD60Q9BZ19 345 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 NDEL1Q9GZM8 345 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 GAL3ST2Q9H3Q3 398 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 RGCCQ9H4X1 137 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 ZCCHC4Q9H5U6 513 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 ABCB9Q9NP78 766 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 FGFR1OP2Q9NVK5 253 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 TAS2R3Q9NYW6 316 aa4.31□□□□□ -1.72
COL4A3-206ENST00000487633 MRPS28Q9Y2Q9 187 aaKnown RBP4.31□□□□□ -1.72
COL4A3-206ENST00000487633 LRP1Q07954 4544 aaKnown RBP4.31□□□□□ -1.72
COL4A3-206ENST00000487633 IGHV3-43A0A0B4J1X8 118 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 A0A1B0GTI1 187 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 KBTBD11-OT1A0A1B0GTJ5 212 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 FAM230AA0A1W2PPH8 454 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 EDF1O60869 148 aaKnown RBP4.3□□□□□ -1.72
COL4A3-206ENST00000487633 MOSP00540 346 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 H2BFMP0C1H6 154 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 IGHV3-43DP0DP04 118 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 FMO3P31513 532 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 MAP2K3P46734 347 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 ZNF134P52741 427 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 PSMA6P60900 246 aaKnown RBP4.3□□□□□ -1.72
COL4A3-206ENST00000487633 ZNF684Q5T5D7 378 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 Q6P435 159 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 PLEKHG7Q6ZR37 379 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 SLC25A26Q70HW3 274 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 ZNF573Q86YE8 665 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 FTMTQ8N4E7 242 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 OR4D6Q8NGJ1 314 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 OR14K1Q8NGZ2 314 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 PLPPR1Q8TBJ4 325 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 C2CD4CQ8TF44 421 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 RTN4IP1Q8WWV3 396 aaPredicted RBP4.3□□□□□ -1.72
COL4A3-206ENST00000487633 CACNG8Q8WXS5 425 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 CREB3L1Q96BA8 519 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 FLYWCH2Q96CP2 140 aaKnown RBP4.3□□□□□ -1.72
COL4A3-206ENST00000487633 KCTD12Q96CX2 325 aaKnown RBP4.3□□□□□ -1.72
COL4A3-206ENST00000487633 CCDC28BQ9BUN5 200 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 GGTLC1Q9BX51 225 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 PKIBQ9C010 78 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 FAM107BQ9H098 131 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 RABEP2Q9H5N1 569 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 CALYQ9NYX4 217 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 IDI2-AS1Q9NZ38 188 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 GLS2Q9UI32 602 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 TMEM5Q9Y2B1 443 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 POLDIP2Q9Y2S7 368 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 NUBP2Q9Y5Y2 271 aa4.3□□□□□ -1.72
COL4A3-206ENST00000487633 LOC102724200A0A096LPH7 203 aaPredicted RBP4.29□□□□□ -1.72
COL4A3-206ENST00000487633 ZNF729A6NN14 1252 aaPredicted RBP4.29□□□□□ -1.72
COL4A3-206ENST00000487633 EPM2AB3EWF7 344 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 NPIPB11E5RHQ5 1161 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 BMPR1BO00238 502 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 SLC33A1O00400 549 aaPredicted RBP4.29□□□□□ -1.72
COL4A3-206ENST00000487633 HSPB6O14558 160 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms