RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 CCL28Q9NRJ3 127 aa12.92□□□□□ -0.34
EPHB4-206ENST00000487222 CLEC1BQ9P126 229 aa12.92□□□□□ -0.34
EPHB4-206ENST00000487222 SPTA1P02549 2419 aa12.92□□□□□ -0.34
EPHB4-206ENST00000487222 M0QZ24 198 aa12.92□□□□□ -0.34
EPHB4-206ENST00000487222 USF1P22415 310 aaPredicted RBP12.92□□□□□ -0.34
EPHB4-206ENST00000487222 SULT1A1P50225 295 aa12.92□□□□□ -0.34
EPHB4-206ENST00000487222 ZNF154Q13106 437 aa12.92□□□□□ -0.34
EPHB4-206ENST00000487222 COX19Q49B96 90 aa12.92□□□□□ -0.34
EPHB4-206ENST00000487222 LHFPL5Q8TAF8 219 aa12.92□□□□□ -0.34
EPHB4-206ENST00000487222 R3HDM4Q96D70 268 aa12.92□□□□□ -0.34
EPHB4-206ENST00000487222 LRRC3BQ96PB8 259 aa12.92□□□□□ -0.34
EPHB4-206ENST00000487222 POLR2AP24928 1970 aaKnown RBP12.92□□□□□ -0.34
EPHB4-206ENST00000487222 FOXS1O43638 330 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 ADAT3Q96EY9 351 aaPredicted RBP12.91□□□□□ -0.34
EPHB4-206ENST00000487222 OR2H1Q9GZK4 316 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 RAB33BQ9H082 229 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 APC2O95996 2303 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 OOEPA6NGQ2 149 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 NCBP2LA6PVI3 153 aaKnown RBP12.91□□□□□ -0.34
EPHB4-206ENST00000487222 DNPH1O43598 174 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 ANKRD34CP0C6C1 535 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 SMIM17P0DL12 118 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 BMP5P22003 454 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 ERVS71-1P61550 626 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 TMEM108Q6UXF1 575 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 VSTM2AQ8TAG5 236 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 DTD1Q8TEA8 209 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 SIRT7Q9NRC8 400 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 CA11O75493 328 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 DAOP14920 347 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 RPL29P47914 159 aaKnown RBP12.91□□□□□ -0.34
EPHB4-206ENST00000487222 BTNL3Q6UXE8 466 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 LYZL2Q7Z4W2 148 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 DTX4Q9Y2E6 619 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 TEX50A0A1B0GTY4 177 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 J3QT63 122 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 SMIM6P0DI80 62 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 LIMS1P48059 325 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 MRPS11P82912 194 aaKnown RBP12.91□□□□□ -0.34
EPHB4-206ENST00000487222 MGAT2Q10469 447 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 SMUG1Q53HV7 270 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 Q56UQ5 140 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 TMEM65Q6PI78 240 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 C9orf40Q8IXQ3 194 aa12.91□□□□□ -0.34
EPHB4-206ENST00000487222 FAM186AA6NE01 2351 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 G0S2P27469 103 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 OR10G8Q8NGN5 311 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 ZPLD1Q8TCW7 415 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 TECRQ9NZ01 308 aaKnown RBP12.9□□□□□ -0.34
EPHB4-206ENST00000487222 OR1A1Q9P1Q5 309 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 VSIG4Q9Y279 399 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 C11orf94C9JXX5 98 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 C3orf80F5H4A9 247 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 SP1P08047 785 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 KIR3DL2P43630 455 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 NCMAPQ5T1S8 102 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 SPINK14Q6IE38 97 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 TCFL5Q9UL49 500 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 TRIP12Q14669 1992 aaPredicted RBP12.9□□□□□ -0.34
EPHB4-206ENST00000487222 A0A1W2PPC1 479 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 BCL3P20749 454 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 DLK1P80370 383 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 NAAAQ02083 359 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 OR2M3Q8NG83 312 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 GPR87Q9BY21 358 aa12.9□□□□□ -0.34
EPHB4-206ENST00000487222 NKX2-6A6NCS4 301 aa12.9□□□□□ -0.35
EPHB4-206ENST00000487222 OR2J3O76001 311 aa12.9□□□□□ -0.35
EPHB4-206ENST00000487222 HTR1DP28221 377 aa12.9□□□□□ -0.35
EPHB4-206ENST00000487222 PMELP40967 661 aa12.9□□□□□ -0.35
EPHB4-206ENST00000487222 AMTP48728 403 aa12.9□□□□□ -0.35
EPHB4-206ENST00000487222 UBE2L3P68036 154 aaKnown RBP12.9□□□□□ -0.35
EPHB4-206ENST00000487222 HFEQ30201 348 aa12.9□□□□□ -0.35
EPHB4-206ENST00000487222 MRGPRGQ86SM5 289 aa12.9□□□□□ -0.35
EPHB4-206ENST00000487222 TUSC5Q8IXB3 177 aa12.9□□□□□ -0.35
EPHB4-206ENST00000487222 OR4C5Q8NGB2 326 aa12.9□□□□□ -0.35
EPHB4-206ENST00000487222 HES7Q9BYE0 225 aa12.9□□□□□ -0.35
EPHB4-206ENST00000487222 SLC26A1Q9H2B4 701 aa12.9□□□□□ -0.35
EPHB4-206ENST00000487222 OR2W1Q9Y3N9 320 aa12.9□□□□□ -0.35
EPHB4-206ENST00000487222 A0A1B0GU03 582 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 A0A1W2PQF6 199 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 OR5H1A6NKK0 313 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 PNLIPP16233 465 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 CRISP2P16562 243 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 GZMHP20718 246 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 OR10A7Q8NGE5 316 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 PRSS3P2Q8NHM4 247 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 IL22RA2Q969J5 263 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 GPR35Q9HC97 309 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 TMEM38BQ9NVV0 291 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 KLHDC2Q9Y2U9 406 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 R4GN57 208 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 A0A1B0GTQ1 180 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 GCM2O75603 506 aaPredicted RBP12.89□□□□□ -0.35
EPHB4-206ENST00000487222 HLA-DQB1P01920 261 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 TTRP02766 147 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 PRRX1P54821 245 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 FAM74A3Q4VXF1 159 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 OR5A2Q8NGI9 324 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 CT55Q8WUE5 264 aa12.89□□□□□ -0.35
EPHB4-206ENST00000487222 ZFC3H1O60293 1989 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms