RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 LRRC10Q5BKY1 277 aa7.94□□□□□ -1.14
MCF2L-227ENST00000486806 HACD4Q5VWC8 232 aa7.94□□□□□ -1.14
MCF2L-227ENST00000486806 WDR25Q64LD2 544 aaPredicted RBP7.94□□□□□ -1.14
MCF2L-227ENST00000486806 ZNF497Q6ZNH5 498 aa7.94□□□□□ -1.14
MCF2L-227ENST00000486806 Q6ZPA2 131 aa7.94□□□□□ -1.14
MCF2L-227ENST00000486806 NLRC3Q7RTR2 1065 aa7.94□□□□□ -1.14
MCF2L-227ENST00000486806 DTX3Q8N9I9 347 aa7.94□□□□□ -1.14
MCF2L-227ENST00000486806 WFDC11Q8NEX6 87 aa7.94□□□□□ -1.14
MCF2L-227ENST00000486806 PPP1R35Q8TAP8 253 aa7.94□□□□□ -1.14
MCF2L-227ENST00000486806 PHF21AQ96BD5 680 aa7.94□□□□□ -1.14
MCF2L-227ENST00000486806 Q96MF0 132 aa7.94□□□□□ -1.14
MCF2L-227ENST00000486806 FAAP24Q9BTP7 215 aa7.94□□□□□ -1.14
MCF2L-227ENST00000486806 C12orf4Q9NQ89 552 aa7.94□□□□□ -1.14
MCF2L-227ENST00000486806 ETAA1Q9NY74 926 aa7.94□□□□□ -1.14
MCF2L-227ENST00000486806 SLC25A10Q9UBX3 287 aaPredicted RBP7.94□□□□□ -1.14
MCF2L-227ENST00000486806 AK3Q9UIJ7 227 aa7.94□□□□□ -1.14
MCF2L-227ENST00000486806 ITPR2Q14571 2701 aa7.94□□□□□ -1.14
MCF2L-227ENST00000486806 ANKRD17O75179 2603 aaKnown RBP7.93□□□□□ -1.14
MCF2L-227ENST00000486806 TRBV6-6A0A0A6YYG2 114 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 A0A0G2JMP0 313 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 A0A0X1KG70 313 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 UBE2QL1A1L167 161 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 GPR37O15354 613 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 NDUFB3O43676 98 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 SSX5O60225 188 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 INHBBP09529 407 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 PTHLHP12272 177 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 USF1P22415 310 aaPredicted RBP7.93□□□□□ -1.14
MCF2L-227ENST00000486806 PTBP1P26599 531 aaKnown RBP eCLIP7.93□□□□□ -1.14
MCF2L-227ENST00000486806 P2RX3P56373 397 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 AESQ08117 197 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 LOXL1Q08397 574 aaPredicted RBP7.93□□□□□ -1.14
MCF2L-227ENST00000486806 MADCAM1Q13477 382 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 PNLIPRP3Q17RR3 467 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 SPANXN2Q5MJ10 180 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 PYHIN1Q6K0P9 492 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 TCF23Q7RTU1 214 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 OR4M2Q8NGB6 313 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 OR5D13Q8NGL4 314 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 MRPL30Q8TCC3 161 aaKnown RBP7.93□□□□□ -1.14
MCF2L-227ENST00000486806 NUDCD2Q8WVJ2 157 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 GCDHQ92947 438 aaPredicted RBP7.93□□□□□ -1.14
MCF2L-227ENST00000486806 DACT3Q96B18 629 aaPredicted RBP7.93□□□□□ -1.14
MCF2L-227ENST00000486806 RAB39BQ96DA2 213 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 C1orf159Q96HA4 380 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 ABHD1Q96SE0 405 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 HDHD3Q9BSH5 251 aaPredicted RBP7.93□□□□□ -1.14
MCF2L-227ENST00000486806 SSBP3Q9BWW4 388 aaPredicted RBP7.93□□□□□ -1.14
MCF2L-227ENST00000486806 NCOR1P1Q9H4R4 102 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 RABL2AQ9UBK7 228 aaPredicted RBP7.93□□□□□ -1.14
MCF2L-227ENST00000486806 CLN8Q9UBY8 286 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 ANAPC10Q9UM13 185 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 PCDHB10Q9UN67 800 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 RABL2BQ9UNT1 228 aa7.93□□□□□ -1.14
MCF2L-227ENST00000486806 TRBV23-1A0A0A0MS06 115 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 TMEM30CPA0ZSE6 113 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 ODAMA1E959 279 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 MEIOCA2RUB1 952 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 FABP12A6NFH5 140 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 C22orf46C9J442 243 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 FAM157AC9JC47 383 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 CTDSPLO15194 276 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 FCGR3AP08637 254 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 NDUFB7P17568 137 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 DTYMKP23919 212 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 GLIPR1P48060 266 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 GNG2P59768 71 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 GNB2P62879 340 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 MRPS10P82664 201 aaKnown RBP7.92□□□□□ -1.14
MCF2L-227ENST00000486806 LSAMPQ13449 338 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 IL18Q14116 193 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 EDDM3AQ14507 147 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 C11orf91Q3C1V1 193 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 ESCO2Q56NI9 601 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 KRBOX4Q5JUW0 171 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 SLC35E4Q6ICL7 350 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 ZNF880Q6PDB4 577 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 FAM131AQ6UXB0 335 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 GDPD3Q7L5L3 318 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 SNX29P2Q8IUI4 249 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 TPRX1Q8N7U7 411 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 C8orf46Q8TAG6 207 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 NEK7Q8TDX7 302 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 GPX8Q8TED1 209 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 C15orf40Q8WUR7 153 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 SMIM4Q8WVI0 70 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 DCTN5Q9BTE1 182 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 SRRQ9GZT4 340 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 RIMS4Q9H426 269 aaPredicted RBP7.92□□□□□ -1.14
MCF2L-227ENST00000486806 SCPEP1Q9HB40 452 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 C19orf12Q9NSK7 152 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 MBNL3Q9NUK0 354 aaKnown RBP7.92□□□□□ -1.14
MCF2L-227ENST00000486806 KIF25Q9UIL4 384 aa7.92□□□□□ -1.14
MCF2L-227ENST00000486806 MRPS7Q9Y2R9 242 aaKnown RBP7.92□□□□□ -1.14
MCF2L-227ENST00000486806 POLR3KQ9Y2Y1 108 aaPredicted RBP7.92□□□□□ -1.14
MCF2L-227ENST00000486806 PRRC2AP48634 2157 aaKnown RBP7.91□□□□□ -1.14
MCF2L-227ENST00000486806 POM121CA8CG34 1229 aa7.91□□□□□ -1.14
MCF2L-227ENST00000486806 RNF223E7ERA6 249 aa7.91□□□□□ -1.14
MCF2L-227ENST00000486806 SULT1C2O00338 296 aa7.91□□□□□ -1.14
MCF2L-227ENST00000486806 PHF1O43189 567 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms