RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 ARPC5O15511 151 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 PSPNO60542 156 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 PTBP3O95758 552 aaKnown RBP5.26□□□□□ -1.57
CLK1-210ENST00000473565 RPS2P15880 293 aaKnown RBP5.26□□□□□ -1.57
CLK1-210ENST00000473565 CXCL2P19875 107 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 RBPJQ06330 500 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 BSPH1Q075Z2 132 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 KLRB1Q12918 225 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 GRK1Q15835 563 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 ASCC1Q8N9N2 400 aaKnown RBP5.26□□□□□ -1.57
CLK1-210ENST00000473565 OR5M8Q8NGP6 311 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 MITD1Q8WV92 249 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 IL1F10Q8WWZ1 152 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 RND1Q92730 232 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 NEUROG1Q92886 237 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 ELMOD3Q96FG2 381 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 PDCD10Q9BUL8 212 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 MYOZ1Q9NP98 299 aaPredicted RBP5.26□□□□□ -1.57
CLK1-210ENST00000473565 TAAR3PQ9P1P4 343 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 EDARQ9UNE0 448 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 POLDIP2Q9Y2S7 368 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 UTP20O75691 2785 aaKnown RBP5.26□□□□□ -1.57
CLK1-210ENST00000473565 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.25□□□□□ -1.57
CLK1-210ENST00000473565 FAM90A10PA6NDY2 464 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 FAM90A18PA6NE21 464 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 FAM90A16PA6NEW6 464 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 FAM90A20PA6NIJ5 464 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 FAM90A8PA6NJQ4 464 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 FAM90A7PA6NKC0 464 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 FAM90A22PA8MWA6 464 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 FAM90A12PA8MX19 464 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 FAM90A5PA8MXJ8 464 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 FAM90A23PA8MXZ1 464 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 HOXB5P09067 269 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 FAM90A15PP0C7V4 464 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 FAM90A13PP0C7W8 464 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 FAM90A14PP0C7W9 464 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 FAM90A24PP0C7X0 464 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 PPP3CBP16298 524 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 GLRXP35754 106 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 SERPINF1P36955 418 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 AP2S1P53680 142 aaPredicted RBP5.25□□□□□ -1.57
CLK1-210ENST00000473565 KLF3P57682 345 aaPredicted RBP5.25□□□□□ -1.57
CLK1-210ENST00000473565 RAP2BP61225 183 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 TMEM128Q5BJH2 165 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 UNQ6126/PRO20091Q6UXV3 157 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 MOGAT3Q86VF5 341 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 FAM169BQ8N8A8 192 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 LRRC29Q8WV35 223 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 PCNPQ8WW12 178 aaKnown RBP5.25□□□□□ -1.57
CLK1-210ENST00000473565 WFIKKN1Q96NZ8 548 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 OR2V2Q96R30 315 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 DMRTA2Q96SC8 542 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 PHB2Q99623 299 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 PIGMQ9H3S5 423 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 TMEM165Q9HC07 324 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 DCAF16Q9NXF7 216 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 MEMO1Q9Y316 297 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 DSCAMO60469 2012 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 CACNA1BQ00975 2339 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 TRAV14DV4A0A0A6YYC5 116 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 IGKV1D-13A0A0B4J2D9 117 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 C5orf51A6NDU8 294 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 CEACAM18A8MTB9 384 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 CCL21O00585 134 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 SLC34A2O95436 690 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 HAND1O96004 215 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 ZNF728P0DKX0 622 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 IGKV1-13P0DP09 117 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 ZNF250P15622 560 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 PMELP40967 661 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 PIGPP57054 158 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 IL13RA2Q14627 380 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 LDLRAD3Q86YD5 345 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 POC1AQ8NBT0 407 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 TMEM185AQ8NFB2 350 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 SECTM1Q8WVN6 248 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 ITLN1Q8WWA0 313 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 KIRREL1Q96J84 757 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 PLK3Q9H4B4 646 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 ESRP2Q9H6T0 727 aaKnown RBP5.25□□□□□ -1.57
CLK1-210ENST00000473565 RDH8Q9NYR8 311 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 JKAMPQ9P055 326 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 OR1A1Q9P1Q5 309 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 C14orf166Q9Y224 244 aaKnown RBP5.25□□□□□ -1.57
CLK1-210ENST00000473565 AKAP6Q13023 2319 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 TEX13DA0A0J9YY54 714 aaPredicted RBP5.25□□□□□ -1.57
CLK1-210ENST00000473565 PLSCR5A0PG75 271 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 RFPL4AA6NLU0 287 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 TMEM210A6NLX4 147 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 RFPL4AL1F8VTS6 287 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 SFT2D2O95562 160 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 DUS4LO95620 317 aaKnown RBP5.25□□□□□ -1.57
CLK1-210ENST00000473565 IGHV3-13P01766 116 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 DHODHQ02127 395 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 AESQ08117 197 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 DHRS11Q6UWP2 260 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 ACP7Q6ZNF0 438 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 LINC01560Q8TB33 94 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 DCTN5Q9BTE1 182 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms