RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 ZNF154Q13106 437 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 TMEM187Q14656 261 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 OR8G1Q15617 311 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 FAM180AQ6UWF9 173 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 LIAT1Q6ZQX7 453 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 WDR86Q86TI4 376 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 FAM90A1Q86YD7 464 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 OR8H3Q8N146 312 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 BHLHE23Q8NDY6 225 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 STOML3Q8TAV4 291 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 MRPL30Q8TCC3 161 aaKnown RBP6.47□□□□□ -1.37
COL6A3-208ENST00000468792 FAM216AQ8WUB2 273 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 RTN4IP1Q8WWV3 396 aaPredicted RBP6.47□□□□□ -1.37
COL6A3-208ENST00000468792 IL22RA2Q969J5 263 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 SEC22AQ96IW7 307 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 CYYR1Q96J86 154 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 AQP10Q96PS8 301 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 ADAT1Q9BUB4 502 aaKnown RBP6.47□□□□□ -1.37
COL6A3-208ENST00000468792 RNF126Q9BV68 326 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 TOLLIPQ9H0E2 274 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 SLC25A32Q9H2D1 315 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 SLC2A9Q9NRM0 540 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 MBNL3Q9NUK0 354 aaKnown RBP6.47□□□□□ -1.37
COL6A3-208ENST00000468792 RASL12Q9NYN1 266 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 GLS2Q9UI32 602 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 ZNF835Q9Y2P0 537 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 MSRB2Q9Y3D2 182 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 TMED3Q9Y3Q3 217 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 WIPI2Q9Y4P8 454 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 SPEF1Q9Y4P9 236 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 BSNQ9UPA5 3926 aa6.47□□□□□ -1.37
COL6A3-208ENST00000468792 INTS1Q8N201 2190 aaKnown RBP6.47□□□□□ -1.37
COL6A3-208ENST00000468792 PTPRZ1P23471 2315 aaPredicted RBP6.47□□□□□ -1.37
COL6A3-208ENST00000468792 SPENQ96T58 3664 aaKnown RBP6.46□□□□□ -1.37
COL6A3-208ENST00000468792 A0A1B0GW55 424 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 A8MXE2 369 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 LEUTXA8MZ59 168 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 CCSO14618 274 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 SH2D1BO14796 132 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 TAAR5O14804 337 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 LAMA5O15230 3695 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 MPPED1O15442 326 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 KNG1P01042 644 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 IGHV3-13P01766 116 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 DUX4L2P0CJ85 424 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 DUX4L3P0CJ86 424 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 DUX4L4P0CJ87 422 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 DUX4L5P0CJ88 424 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 DUX4L6P0CJ89 424 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 DUX4L7P0CJ90 424 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 ZNF250P15622 560 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 PI3P19957 117 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 AADACP22760 399 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 GCH1P30793 250 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 GLRXP35754 106 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 CD200P41217 278 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 TDGF1P3P51864 188 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 UCNP55089 124 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 BAMBIQ13145 260 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 SLC9A3R2Q15599 337 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 MSMO1Q15800 293 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 ABCA11PQ4W5N1 156 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 SPATA46Q5T0L3 261 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 ZNF474Q6S9Z5 364 aaPredicted RBP6.46□□□□□ -1.38
COL6A3-208ENST00000468792 PCSK4Q6UW60 755 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 ZNF497Q6ZNH5 498 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 SPACA3Q8IXA5 215 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 C11orf53Q8IXP5 236 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 LGI3Q8N145 548 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 EIF4E3Q8N5X7 224 aaKnown RBP6.46□□□□□ -1.38
COL6A3-208ENST00000468792 OR10Z1Q8NGY1 313 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 LRRC20Q8TCA0 184 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 MSI2Q96DH6 328 aaKnown RBP6.46□□□□□ -1.38
COL6A3-208ENST00000468792 ABHD14BQ96IU4 210 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 C18orf12Q96KH6 178 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 TMEM56Q96MV1 263 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 DNTTIP1Q9H147 329 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 OPN3Q9H1Y3 402 aaPredicted RBP6.46□□□□□ -1.38
COL6A3-208ENST00000468792 METTL8Q9H825 291 aaKnown RBP6.46□□□□□ -1.38
COL6A3-208ENST00000468792 TMEM165Q9HC07 324 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 ELOVL5Q9NYP7 299 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 DUX4Q9UBX2 424 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 TMEM56-RWDD3S4R434 201 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 MGAQ8IWI9 3026 aa6.46□□□□□ -1.38
COL6A3-208ENST00000468792 DSPP15924 2871 aaKnown RBP6.46□□□□□ -1.38
COL6A3-208ENST00000468792 CUL9Q8IWT3 2517 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 BOD1L1Q8NFC6 3051 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 IGLV3-9A0A075B6K5 115 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 C13orf42A0A1B0GVH6 325 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 CLEC18AA5D8T8 446 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 FAM25EA8MYX2 175 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 EEF1E1-BLOC1S5C9J1V9 151 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 H0YIZ8 118 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.45□□□□□ -1.38
COL6A3-208ENST00000468792 GPR31O00270 319 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 SLC33A1O00400 549 aaPredicted RBP6.45□□□□□ -1.38
COL6A3-208ENST00000468792 PRRG2O14669 202 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 MLNRO43193 412 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 ADAP1O75689 374 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 RHBDL1O75783 438 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms