RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 GAPTQ8N292 157 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 FAM216BQ8N7L0 139 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 PLPPR1Q8TBJ4 325 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 MED30Q96HR3 178 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 OCSTAMPQ9BR26 566 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 FAM234AQ9H0X4 552 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 BEX4Q9NWD9 120 aaPredicted RBP17.56■□□□□ 0.4
VPS13B-204ENST00000441350 ETAA1Q9NY74 926 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 KLK11Q9UBX7 282 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 MTFP1Q9UDX5 166 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 HECTD1Q9ULT8 2610 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 ANKRD17O75179 2603 aaKnown RBP17.55■□□□□ 0.4
VPS13B-204ENST00000441350 ORC5O43913 435 aa17.55■□□□□ 0.4
VPS13B-204ENST00000441350 TK1P04183 234 aa17.55■□□□□ 0.4
VPS13B-204ENST00000441350 IL7P13232 177 aa17.55■□□□□ 0.4
VPS13B-204ENST00000441350 DNASE1P24855 282 aa17.55■□□□□ 0.4
VPS13B-204ENST00000441350 ZNF497Q6ZNH5 498 aa17.55■□□□□ 0.4
VPS13B-204ENST00000441350 PPP1R35Q8TAP8 253 aa17.55■□□□□ 0.4
VPS13B-204ENST00000441350 C12orf4Q9NQ89 552 aa17.55■□□□□ 0.4
VPS13B-204ENST00000441350 ISPDA4D126 451 aa17.54■□□□□ 0.4
VPS13B-204ENST00000441350 MEIS3P1A6NDR6 274 aa17.54■□□□□ 0.4
VPS13B-204ENST00000441350 ADAM20O43506 726 aa17.54■□□□□ 0.4
VPS13B-204ENST00000441350 UPK1BO75841 260 aa17.54■□□□□ 0.4
VPS13B-204ENST00000441350 SSBP1Q04837 148 aaKnown RBP17.54■□□□□ 0.4
VPS13B-204ENST00000441350 ATXN7L3Q14CW9 347 aaPredicted RBP17.54■□□□□ 0.4
VPS13B-204ENST00000441350 GRK1Q15835 563 aa17.54■□□□□ 0.4
VPS13B-204ENST00000441350 OR5D13Q8NGL4 314 aa17.54■□□□□ 0.4
VPS13B-204ENST00000441350 COQ2Q96H96 371 aa17.54■□□□□ 0.4
VPS13B-204ENST00000441350 RIMS4Q9H426 269 aaPredicted RBP17.54■□□□□ 0.4
VPS13B-204ENST00000441350 CTSZQ9UBR2 303 aa17.54■□□□□ 0.4
VPS13B-204ENST00000441350 ANAPC10Q9UM13 185 aa17.54■□□□□ 0.4
VPS13B-204ENST00000441350 CEACAM18A8MTB9 384 aa17.54■□□□□ 0.4
VPS13B-204ENST00000441350 MGST3O14880 152 aa17.54■□□□□ 0.4
VPS13B-204ENST00000441350 FCN3O75636 299 aa17.54■□□□□ 0.4
VPS13B-204ENST00000441350 RBBP9O75884 186 aa17.54■□□□□ 0.4
VPS13B-204ENST00000441350 CBX5P45973 191 aa17.54■□□□□ 0.4
VPS13B-204ENST00000441350 IFITM3Q01628 133 aa17.54■□□□□ 0.4
VPS13B-204ENST00000441350 RSBN1Q5VWQ0 802 aaPredicted RBP17.54■□□□□ 0.4
VPS13B-204ENST00000441350 SLC35E4Q6ICL7 350 aa17.54■□□□□ 0.4
VPS13B-204ENST00000441350 Q6ZPA2 131 aa17.54■□□□□ 0.4
VPS13B-204ENST00000441350 MRPL30Q8TCC3 161 aaKnown RBP17.54■□□□□ 0.4
VPS13B-204ENST00000441350 MBD6Q96DN6 1003 aa17.54■□□□□ 0.4
VPS13B-204ENST00000441350 TRBV6-6A0A0A6YYG2 114 aa17.53■□□□□ 0.4
VPS13B-204ENST00000441350 MT-ND4P03905 459 aa17.53■□□□□ 0.4
VPS13B-204ENST00000441350 DTYMKP23919 212 aa17.53■□□□□ 0.4
VPS13B-204ENST00000441350 GDNFP39905 211 aa17.53■□□□□ 0.4
VPS13B-204ENST00000441350 MRPS15P82914 257 aaKnown RBP17.53■□□□□ 0.4
VPS13B-204ENST00000441350 AESQ08117 197 aa17.53■□□□□ 0.4
VPS13B-204ENST00000441350 DEFB113Q30KQ7 82 aa17.53■□□□□ 0.4
VPS13B-204ENST00000441350 SPICQ8N5J4 248 aa17.53■□□□□ 0.4
VPS13B-204ENST00000441350 GVQW1Q8N7I0 195 aa17.53■□□□□ 0.4
VPS13B-204ENST00000441350 TMEM185AQ8NFB2 350 aa17.53■□□□□ 0.4
VPS13B-204ENST00000441350 ABCB10Q9NRK6 738 aa17.53■□□□□ 0.4
VPS13B-204ENST00000441350 POM121CA8CG34 1229 aa17.52■□□□□ 0.4
VPS13B-204ENST00000441350 NDUFS8O00217 210 aa17.52■□□□□ 0.4
VPS13B-204ENST00000441350 FCGR3AP08637 254 aa17.52■□□□□ 0.4
VPS13B-204ENST00000441350 TRIQKQ629K1 86 aa17.52■□□□□ 0.4
VPS13B-204ENST00000441350 LRRC75A-AS1Q8N1F1 130 aa17.52■□□□□ 0.4
VPS13B-204ENST00000441350 C10orf105Q8TEF2 133 aa17.52■□□□□ 0.4
VPS13B-204ENST00000441350 FAM168AQ92567 244 aa17.52■□□□□ 0.4
VPS13B-204ENST00000441350 NINJ1Q92982 152 aa17.52■□□□□ 0.4
VPS13B-204ENST00000441350 MIOXQ9UGB7 285 aa17.52■□□□□ 0.4
VPS13B-204ENST00000441350 ZNF230Q9UIE0 474 aaPredicted RBP17.52■□□□□ 0.4
VPS13B-204ENST00000441350 NAV2Q8IVL1 2488 aa17.52■□□□□ 0.39
VPS13B-204ENST00000441350 A0A1W2PQ09 198 aa17.51■□□□□ 0.39
VPS13B-204ENST00000441350 TMEM30CPA0ZSE6 113 aa17.51■□□□□ 0.39
VPS13B-204ENST00000441350 H7C1Q1 480 aa17.51■□□□□ 0.39
VPS13B-204ENST00000441350 NAT1P18440 290 aa17.51■□□□□ 0.39
VPS13B-204ENST00000441350 ACTBP60709 375 aa17.51■□□□□ 0.39
VPS13B-204ENST00000441350 ACTG1P63261 375 aa17.51■□□□□ 0.39
VPS13B-204ENST00000441350 DCTN2Q13561 401 aaKnown RBP17.51■□□□□ 0.39
VPS13B-204ENST00000441350 KRBOX4Q5JUW0 171 aa17.51■□□□□ 0.39
VPS13B-204ENST00000441350 ZNF880Q6PDB4 577 aa17.51■□□□□ 0.39
VPS13B-204ENST00000441350 CLEC2AQ6UVW9 174 aa17.51■□□□□ 0.39
VPS13B-204ENST00000441350 HOGA1Q86XE5 327 aa17.51■□□□□ 0.39
VPS13B-204ENST00000441350 LURAP1Q96LR2 239 aa17.51■□□□□ 0.39
VPS13B-204ENST00000441350 BPESC1Q9GZL8 116 aa17.51■□□□□ 0.39
VPS13B-204ENST00000441350 PALMDQ9NP74 551 aa17.51■□□□□ 0.39
VPS13B-204ENST00000441350 SLC25A10Q9UBX3 287 aaPredicted RBP17.51■□□□□ 0.39
VPS13B-204ENST00000441350 VWC2LB2RUY7 222 aa17.5■□□□□ 0.39
VPS13B-204ENST00000441350 NDUFB3O43676 98 aa17.5■□□□□ 0.39
VPS13B-204ENST00000441350 WNT2P09544 360 aa17.5■□□□□ 0.39
VPS13B-204ENST00000441350 ERP29P30040 261 aaKnown RBP17.5■□□□□ 0.39
VPS13B-204ENST00000441350 RCVRNP35243 200 aa17.5■□□□□ 0.39
VPS13B-204ENST00000441350 GLIPR1P48060 266 aa17.5■□□□□ 0.39
VPS13B-204ENST00000441350 DSCR9P59020 149 aa17.5■□□□□ 0.39
VPS13B-204ENST00000441350 SRSF7Q16629 238 aaKnown RBP eCLIP17.5■□□□□ 0.39
VPS13B-204ENST00000441350 STEAP3Q658P3 488 aa17.5■□□□□ 0.39
VPS13B-204ENST00000441350 C16orf87Q6PH81 154 aa17.5■□□□□ 0.39
VPS13B-204ENST00000441350 ZNF841Q6ZN19 808 aa17.5■□□□□ 0.39
VPS13B-204ENST00000441350 GDPD3Q7L5L3 318 aa17.5■□□□□ 0.39
VPS13B-204ENST00000441350 FGFRL1Q8N441 504 aa17.5■□□□□ 0.39
VPS13B-204ENST00000441350 ST6GALNAC5Q9BVH7 336 aa17.5■□□□□ 0.39
VPS13B-204ENST00000441350 NCOR1P1Q9H4R4 102 aa17.5■□□□□ 0.39
VPS13B-204ENST00000441350 CHMP1AQ9HD42 196 aaPredicted RBP17.5■□□□□ 0.39
VPS13B-204ENST00000441350 IFT46Q9NQC8 304 aa17.5■□□□□ 0.39
VPS13B-204ENST00000441350 ING3Q9NXR8 418 aa17.5■□□□□ 0.39
VPS13B-204ENST00000441350 ZNF107Q9UII5 783 aaPredicted RBP17.5■□□□□ 0.39
VPS13B-204ENST00000441350 KIF25Q9UIL4 384 aa17.5■□□□□ 0.39
VPS13B-204ENST00000441350 ANKRD20A5PA0PJZ0 165 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms