RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 CHMP1AQ9HD42 196 aaPredicted RBP12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 ZNF250P15622 560 aa12.28□□□□□ -0.44
TNFRSF1A-204ENST00000440083 PMELP40967 661 aa12.28□□□□□ -0.44
TNFRSF1A-204ENST00000440083 IL13RA2Q14627 380 aa12.28□□□□□ -0.44
TNFRSF1A-204ENST00000440083 C4orf46Q504U0 113 aa12.28□□□□□ -0.44
TNFRSF1A-204ENST00000440083 ZNF626Q68DY1 528 aa12.28□□□□□ -0.44
TNFRSF1A-204ENST00000440083 FIP1L1Q6UN15 594 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-204ENST00000440083 FAM58AQ8N1B3 248 aa12.28□□□□□ -0.44
TNFRSF1A-204ENST00000440083 SPERTQ8NA61 448 aa12.28□□□□□ -0.44
TNFRSF1A-204ENST00000440083 NEK7Q8TDX7 302 aa12.28□□□□□ -0.44
TNFRSF1A-204ENST00000440083 MAFIPQ8WZ33 124 aa12.28□□□□□ -0.44
TNFRSF1A-204ENST00000440083 VRK1Q99986 396 aaPredicted RBP12.28□□□□□ -0.44
TNFRSF1A-204ENST00000440083 PPA2Q9H2U2 334 aa12.28□□□□□ -0.44
TNFRSF1A-204ENST00000440083 ZNF286AQ9HBT8 521 aa12.28□□□□□ -0.44
TNFRSF1A-204ENST00000440083 DYNLRB1Q9NP97 96 aa12.28□□□□□ -0.44
TNFRSF1A-204ENST00000440083 C12orf4Q9NQ89 552 aa12.28□□□□□ -0.44
TNFRSF1A-204ENST00000440083 EHFQ9NZC4 300 aa12.28□□□□□ -0.44
TNFRSF1A-204ENST00000440083 MTCH1Q9NZJ7 389 aa12.28□□□□□ -0.44
TNFRSF1A-204ENST00000440083 TAAR3PQ9P1P4 343 aa12.28□□□□□ -0.44
TNFRSF1A-204ENST00000440083 VPS13CQ709C8 3753 aa12.27□□□□□ -0.45
TNFRSF1A-204ENST00000440083 VSTM5A8MXK1 200 aa12.27□□□□□ -0.45
TNFRSF1A-204ENST00000440083 HPXP02790 462 aa12.27□□□□□ -0.45
TNFRSF1A-204ENST00000440083 GRPP07492 148 aa12.27□□□□□ -0.45
TNFRSF1A-204ENST00000440083 FCGR3AP08637 254 aa12.27□□□□□ -0.45
TNFRSF1A-204ENST00000440083 SULT1A3P0DMM9 295 aa12.27□□□□□ -0.45
TNFRSF1A-204ENST00000440083 SULT1A4P0DMN0 295 aa12.27□□□□□ -0.45
TNFRSF1A-204ENST00000440083 VSIG10L2P0DP72 767 aa12.27□□□□□ -0.45
TNFRSF1A-204ENST00000440083 KLF3P57682 345 aaPredicted RBP12.27□□□□□ -0.45
TNFRSF1A-204ENST00000440083 CDK10Q15131 360 aa12.27□□□□□ -0.45
TNFRSF1A-204ENST00000440083 LRRC75A-AS1Q8N1F1 130 aa12.27□□□□□ -0.45
TNFRSF1A-204ENST00000440083 OR5AP2Q8NGF4 316 aa12.27□□□□□ -0.45
TNFRSF1A-204ENST00000440083 OR13C8Q8NGS7 320 aa12.27□□□□□ -0.45
TNFRSF1A-204ENST00000440083 SCGB3A2Q96PL1 93 aa12.27□□□□□ -0.45
TNFRSF1A-204ENST00000440083 FYTTD1Q96QD9 318 aaKnown RBP12.27□□□□□ -0.45
TNFRSF1A-204ENST00000440083 HDHD3Q9BSH5 251 aaPredicted RBP12.27□□□□□ -0.45
TNFRSF1A-204ENST00000440083 MGAT4CQ9UBM8 478 aa12.27□□□□□ -0.45
TNFRSF1A-204ENST00000440083 ZNF230Q9UIE0 474 aaPredicted RBP12.27□□□□□ -0.45
TNFRSF1A-204ENST00000440083 IGLV3-9A0A075B6K5 115 aa12.26□□□□□ -0.45
TNFRSF1A-204ENST00000440083 A6NLC8 198 aa12.26□□□□□ -0.45
TNFRSF1A-204ENST00000440083 MCRIP1C9JLW8 97 aa12.26□□□□□ -0.45
TNFRSF1A-204ENST00000440083 PPOXP50336 477 aa12.26□□□□□ -0.45
TNFRSF1A-204ENST00000440083 TAS2R31P59538 309 aa12.26□□□□□ -0.45
TNFRSF1A-204ENST00000440083 SELENOVP59797 346 aa12.26□□□□□ -0.45
TNFRSF1A-204ENST00000440083 ZNF154Q13106 437 aa12.26□□□□□ -0.45
TNFRSF1A-204ENST00000440083 PDCD1Q15116 288 aa12.26□□□□□ -0.45
TNFRSF1A-204ENST00000440083 ATPAF1Q5TC12 328 aaPredicted RBP12.26□□□□□ -0.45
TNFRSF1A-204ENST00000440083 SLC36A1Q7Z2H8 476 aa12.26□□□□□ -0.45
TNFRSF1A-204ENST00000440083 WDR86Q86TI4 376 aa12.26□□□□□ -0.45
TNFRSF1A-204ENST00000440083 SCCPDHQ8NBX0 429 aa12.26□□□□□ -0.45
TNFRSF1A-204ENST00000440083 OR13G1Q8NGZ3 307 aa12.26□□□□□ -0.45
TNFRSF1A-204ENST00000440083 ZNF488Q96MN9 340 aa12.26□□□□□ -0.45
TNFRSF1A-204ENST00000440083 ALX4Q9H161 411 aaPredicted RBP12.26□□□□□ -0.45
TNFRSF1A-204ENST00000440083 MYOZ1Q9NP98 299 aaPredicted RBP12.26□□□□□ -0.45
TNFRSF1A-204ENST00000440083 ZNF581Q9P0T4 197 aa12.26□□□□□ -0.45
TNFRSF1A-204ENST00000440083 H0YL77 283 aa12.25□□□□□ -0.45
TNFRSF1A-204ENST00000440083 M0R233 179 aa12.25□□□□□ -0.45
TNFRSF1A-204ENST00000440083 NXPH2O95156 264 aa12.25□□□□□ -0.45
TNFRSF1A-204ENST00000440083 OR4E1P0C645 316 aa12.25□□□□□ -0.45
TNFRSF1A-204ENST00000440083 ECI1P42126 302 aa12.25□□□□□ -0.45
TNFRSF1A-204ENST00000440083 NKX2-5P52952 324 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF1A-204ENST00000440083 BRICD5Q6PL45 260 aa12.25□□□□□ -0.45
TNFRSF1A-204ENST00000440083 NOXA1Q86UR1 476 aa12.25□□□□□ -0.45
TNFRSF1A-204ENST00000440083 OR11H7Q8NGC8 314 aa12.25□□□□□ -0.45
TNFRSF1A-204ENST00000440083 OR52B4Q8NGK2 314 aa12.25□□□□□ -0.45
TNFRSF1A-204ENST00000440083 ZNF431Q8TF32 576 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF1A-204ENST00000440083 DYRK2Q92630 601 aa12.25□□□□□ -0.45
TNFRSF1A-204ENST00000440083 CYYR1Q96J86 154 aa12.25□□□□□ -0.45
TNFRSF1A-204ENST00000440083 NECAP2Q9NVZ3 263 aa12.25□□□□□ -0.45
TNFRSF1A-204ENST00000440083 RCC2Q9P258 522 aaKnown RBP12.25□□□□□ -0.45
TNFRSF1A-204ENST00000440083 ANXA10Q9UJ72 324 aa12.25□□□□□ -0.45
TNFRSF1A-204ENST00000440083 VSIG4Q9Y279 399 aa12.25□□□□□ -0.45
TNFRSF1A-204ENST00000440083 MTORP42345 2549 aa12.25□□□□□ -0.45
TNFRSF1A-204ENST00000440083 MEIKINA0A087WXM9 373 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 PLSCR5A0PG75 271 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 ZSCAN5BA6NJL1 495 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 F8VVB4 439 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 F8VWA3 439 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 MLNRO43193 412 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 RHBDL1O75783 438 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 IGHV3-13P01766 116 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 C1QBP02746 253 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 PGA5P0DJD9 388 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 PGAM2P15259 253 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 ZNF44P15621 663 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 FPR2P25090 351 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 RBM39Q14498 530 aaKnown RBP12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 GRK1Q15835 563 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 FAM76BQ5HYJ3 339 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 ZNF525Q8N782 197 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 POC1AQ8NBT0 407 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 TERB2Q8NHR7 220 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 MARCH1Q8TCQ1 289 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 Q96MF0 132 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 IL36RNQ9UBH0 155 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 GLS2Q9UI32 602 aa12.24□□□□□ -0.45
TNFRSF1A-204ENST00000440083 OR2AT4A6NND4 320 aa12.23□□□□□ -0.45
TNFRSF1A-204ENST00000440083 F5H5P2 479 aa12.23□□□□□ -0.45
TNFRSF1A-204ENST00000440083 SDCBPO00560 298 aaPredicted RBP12.23□□□□□ -0.45
TNFRSF1A-204ENST00000440083 HSPB6O14558 160 aa12.23□□□□□ -0.45
TNFRSF1A-204ENST00000440083 CDIPTO14735 213 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms