RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 POLR2GP62487 172 aaKnown RBP eCLIP10.69□□□□□ -0.7
TCOF1-205ENST00000439160 STUMQ69YW2 141 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 BTNL3Q6UXE8 466 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 TBC1D26Q86UD7 250 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 ZNF485Q8NCK3 441 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 PTX4Q96A99 478 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 DAZAP1Q96EP5 407 aaKnown RBP10.69□□□□□ -0.7
TCOF1-205ENST00000439160 LGALSLQ3ZCW2 172 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-205ENST00000439160 SPINK9Q5DT21 86 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 CLEC9AQ6UXN8 241 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 OR10Z1Q8NGY1 313 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 MED9Q9NWA0 146 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 KIAA1456Q9P272 454 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 BTBD17A6NE02 478 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 PRR33A8MZF0 331 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 UCP2P55851 309 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 SMUG1Q53HV7 270 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 SLC25A42Q86VD7 318 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 C17orf82Q86X59 251 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-205ENST00000439160 TPRX1Q8N7U7 411 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 C14orf79Q96F83 325 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 TIMP4Q99727 224 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 SAP30LQ9HAJ7 183 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 UBE2L5PA0A1B0GUS4 154 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 CYTIPO60759 359 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 OR5G3P0C626 314 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 CT45A6P0DMU7 189 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 CT45A5P0DMU8 189 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 CT45A7P0DMV0 189 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 RRASP10301 218 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 RBM11P57052 281 aaKnown RBP10.68□□□□□ -0.7
TCOF1-205ENST00000439160 TMEM267Q0VDI3 215 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-205ENST00000439160 SURF2Q15527 256 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-205ENST00000439160 CT45A1Q5HYN5 189 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 FAHD2BQ6P2I3 314 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-205ENST00000439160 OR5C1Q8NGR4 320 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 CT45A3Q8NHU0 189 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 FAHD2AQ96GK7 314 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 C9orf172C9J069 976 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 DTYMKP23919 212 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 C1orf100Q5SVJ3 147 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 S100A7AQ86SG5 101 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 RXFP4Q8TDU9 374 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 NLRC5Q86WI3 1866 aa10.68□□□□□ -0.7
TCOF1-205ENST00000439160 AHRRA9YTQ3 701 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 OPN1MWP04001 364 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 OPN1MW2P0DN77 364 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 OPN1MW3P0DN78 364 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 PMELP40967 661 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 CCL8P80075 99 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 AESQ08117 197 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 PRSS54Q6PEW0 395 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 SEZ6L2Q6UXD5 910 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 HOGA1Q86XE5 327 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 NPAS1Q99742 590 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 KPTNQ9Y664 436 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 hADV38S2A0JD32 116 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 NPIPB13A6NJU9 1138 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 UMAD1C9J7I0 102 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 NPIPB4C9JG80 1138 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 CRHP06850 196 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 METTL15P1P0C7V9 234 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 COX7A1P24310 79 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 ZFP36L1Q07352 338 aaKnown RBP10.67□□□□□ -0.7
TCOF1-205ENST00000439160 OR2C3Q8N628 320 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 MRPL24Q96A35 216 aaKnown RBP10.67□□□□□ -0.7
TCOF1-205ENST00000439160 FAM131CQ96AQ9 280 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 CA10Q9NS85 328 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 OR6C3Q9NZP0 311 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 ONECUT1Q9UBC0 465 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 CCL21O00585 134 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 CST4P01036 141 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 CEACAM21Q3KPI0 293 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 ZNF787Q6DD87 383 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 OR5D13Q8NGL4 314 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 RGP1Q92546 391 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-205ENST00000439160 SDHCQ99643 169 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-205ENST00000439160 ZNF703Q9H7S9 590 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-205ENST00000439160 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-205ENST00000439160 FBXL17Q9UF56 701 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 ZNF107Q9UII5 783 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-205ENST00000439160 VSIG4Q9Y279 399 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 IGHV3OR15-7A0A075B7D8 119 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 KLF7O75840 302 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-205ENST00000439160 KLK2P20151 261 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 COX5AP20674 150 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 P2RY6Q15077 328 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 UBE2V2Q15819 145 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 LRRC75AQ8NAA5 344 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 BORCS7Q96B45 105 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 RPUSD4Q96CM3 377 aaKnown RBP10.67□□□□□ -0.7
TCOF1-205ENST00000439160 CXorf58Q96LI9 332 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 WNT5BQ9H1J7 359 aa10.67□□□□□ -0.7
TCOF1-205ENST00000439160 TSC2P49815 1807 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 OR7C2O60412 319 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 GFRA3O60609 400 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 IGHMP01871 453 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 ADRA2AP08913 450 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 ZNF260Q3ZCT1 412 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 C1orf185Q5T7R7 199 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms