RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 RIPPLY2Q5TAB7 128 aa14.42□□□□□ -0.1
TTC3-209ENST00000438055 ADAM5Q6NVV9 412 aa14.42□□□□□ -0.1
TTC3-209ENST00000438055 TMEM105Q8N8V8 129 aa14.42□□□□□ -0.1
TTC3-209ENST00000438055 MSI2Q96DH6 328 aaKnown RBP14.42□□□□□ -0.1
TTC3-209ENST00000438055 ARG1P05089 322 aa14.41□□□□□ -0.1
TTC3-209ENST00000438055 SERPINE2P07093 398 aa14.41□□□□□ -0.1
TTC3-209ENST00000438055 TMEM164Q5U3C3 297 aa14.41□□□□□ -0.1
TTC3-209ENST00000438055 ESPL1Q14674 2120 aa14.41□□□□□ -0.1
TTC3-209ENST00000438055 ANKRD30BLA7E2S9 258 aa14.41□□□□□ -0.1
TTC3-209ENST00000438055 CNOT4O95628 575 aaKnown RBP14.41□□□□□ -0.1
TTC3-209ENST00000438055 SNRPEP62304 92 aaKnown RBP14.41□□□□□ -0.1
TTC3-209ENST00000438055 IP6K3Q96PC2 410 aa14.41□□□□□ -0.1
TTC3-209ENST00000438055 KCNS2Q9ULS6 477 aa14.41□□□□□ -0.1
TTC3-209ENST00000438055 DIDO1Q9BTC0 2240 aaKnown RBP14.41□□□□□ -0.1
TTC3-209ENST00000438055 SYNGR1O43759 233 aa14.41□□□□□ -0.1
TTC3-209ENST00000438055 PPP1CCP36873 323 aaKnown RBP14.41□□□□□ -0.1
TTC3-209ENST00000438055 IGFBP7Q16270 282 aa14.41□□□□□ -0.1
TTC3-209ENST00000438055 HAGHQ16775 308 aa14.41□□□□□ -0.1
TTC3-209ENST00000438055 OR5C1Q8NGR4 320 aa14.41□□□□□ -0.1
TTC3-209ENST00000438055 SIGLEC12Q96PQ1 595 aa14.41□□□□□ -0.1
TTC3-209ENST00000438055 WDFY3Q8IZQ1 3526 aa14.41□□□□□ -0.1
TTC3-209ENST00000438055 C7orf77A4D0Y5 90 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 CYTIPO60759 359 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 SEC11BP0C7V7 166 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 HNF4GQ14541 408 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 OR8B8Q15620 311 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 SOHLH1Q5JUK2 328 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 ABLIM2Q6H8Q1 611 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 SUMF2Q8NBJ7 301 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 RPL36A-HNRNPH2H7BZ11 118 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 S100A9P06702 114 aaKnown RBP14.4□□□□□ -0.1
TTC3-209ENST00000438055 APLNRP35414 380 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 OR2B8PP59922 312 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 SRPXP78539 464 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 ZNF266Q14584 549 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 OR1C1Q15619 314 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 CNOT1A5YKK6 2376 aaKnown RBP14.4□□□□□ -0.1
TTC3-209ENST00000438055 KIAA2026Q5HYC2 2103 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 WDFY4Q6ZS81 3184 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 TMEM42Q69YG0 159 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 ZNF818PQ6ZRF7 136 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 POMT1Q9Y6A1 747 aa14.4□□□□□ -0.1
TTC3-209ENST00000438055 ZNF98A6NK75 572 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 A6NLC8 198 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 CD5P06127 495 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 DANCRP0C864 163 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 SNCAP37840 140 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 OR2T2Q6IF00 324 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 OR2M7Q8NG81 312 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 APOBEC3DQ96AK3 386 aaPredicted RBP14.39□□□□□ -0.11
TTC3-209ENST00000438055 FAM173AQ9BQD7 235 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 CRIM1Q9NZV1 1036 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 CACFD1Q9UGQ2 172 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 FREM2Q5SZK8 3169 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 KIR2DS1A0A191URI9 304 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 A0A1W2PPH5 198 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 KIR2DS4P43632 304 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 KIR2DS1Q14954 304 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 AKR1C8PQ5T2L2 129 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 FAM24BQ8N5W8 94 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 C18orf12Q96KH6 178 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 SLC25A31Q9H0C2 315 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 TMEM222Q9H0R3 208 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 ZNF552Q9H707 407 aaPredicted RBP14.39□□□□□ -0.11
TTC3-209ENST00000438055 A0A1W2PR80 420 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 RUNX1Q01196 453 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 IZUMO4Q1ZYL8 232 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 SFT2D1Q8WV19 159 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 ADGRG7Q96K78 797 aa14.39□□□□□ -0.11
TTC3-209ENST00000438055 MEX3AA1L020 520 aaKnown RBP14.38□□□□□ -0.11
TTC3-209ENST00000438055 CD300LBA8K4G0 201 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 TRDCB7Z8K6 153 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 MMP7P09237 267 aaPredicted RBP14.38□□□□□ -0.11
TTC3-209ENST00000438055 ATP6V0CP27449 155 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 TECTBQ96PL2 329 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 DEFB127Q9H1M4 99 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 ARRDC1-AS1Q9H2J1 176 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 IGKV1D-13A0A0B4J2D9 117 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 hCG_1809904A0A1W2PP81 198 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 A0A1W2PR64 198 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 A0A1W2PRV1 198 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 IGKV1-13P0DP09 117 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 CA6P23280 308 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 C1orf210Q8IVY1 113 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 ABHD14AQ9BUJ0 271 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 HMGN3Q15651 99 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 HIKESHIQ53FT3 197 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 IL22RA1Q8N6P7 574 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 C1QTNF5Q9BXJ0 243 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 ESRP2Q9H6T0 727 aaKnown RBP14.38□□□□□ -0.11
TTC3-209ENST00000438055 DECR2Q9NUI1 292 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 MTCH1Q9NZJ7 389 aa14.38□□□□□ -0.11
TTC3-209ENST00000438055 ERRFI1Q9UJM3 462 aaPredicted RBP14.38□□□□□ -0.11
TTC3-209ENST00000438055 STRAPQ9Y3F4 350 aaKnown RBP14.38□□□□□ -0.11
TTC3-209ENST00000438055 CLN3Q13286 438 aa14.37□□□□□ -0.11
TTC3-209ENST00000438055 C10orf91Q5T1B1 145 aa14.37□□□□□ -0.11
TTC3-209ENST00000438055 OR10J5Q8NHC4 309 aa14.37□□□□□ -0.11
TTC3-209ENST00000438055 RARRES2Q99969 163 aa14.37□□□□□ -0.11
TTC3-209ENST00000438055 PRDM14Q9GZV8 571 aa14.37□□□□□ -0.11
TTC3-209ENST00000438055 CEP250Q9BV73 2442 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms