RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 HIST1H2BLQ99880 126 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 CACNG6Q9BXT2 260 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 MS4A8Q9BY19 250 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 AUNIPQ9H7T9 357 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 SLC17A5Q9NRA2 495 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 SPANXA1Q9NS26 97 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 LYRM2Q9NU23 88 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 ELOVL5Q9NYP7 299 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 TAS2R13Q9NYV9 303 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 OR5AC2Q9NZP5 309 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 CCDC167Q9P0B6 97 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 COPS7AQ9UBW8 275 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 CACFD1Q9UGQ2 172 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 VAX2Q9UIW0 290 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 ST3GAL6Q9Y274 331 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 HDGFL3Q9Y3E1 203 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 RYR1P21817 5038 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 A0A096LPI6 279 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 TRDV1A0A1B0GX56 115 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 A0A1W2PNV4 684 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 FAM230AA0A1W2PPH8 454 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 A0A1W2PPV4 95 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 FAM220BPB1ANY3 271 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 SUPT3HB4E1H0 165 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 GNGT2O14610 69 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 HIST1H2BKO60814 126 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 ERAL1O75616 437 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 ZNF432O94892 652 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 YIF1AO95070 293 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 UBL3O95164 117 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 RCBTB2O95199 551 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 IGHG4P01861 327 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 CD74P04233 296 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 HIST1H2BJP06899 126 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 ADH4P08319 380 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 CD14P08571 375 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 HIST1H2BOP23527 126 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 PEBP1P30086 187 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 GABRA5P31644 462 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 HIST1H2BBP33778 126 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 RAB7AP51149 207 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 DVL1P1P54792 670 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 GEMP55040 296 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 HIST1H2BDP58876 126 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 TAS2R19P59542 299 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 HIST1H2BCP62807 126 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 SLC35A1P78382 337 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 H3F3AP84243 136 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 TGM3Q08188 693 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 EBPQ15125 230 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 NSDHLQ15738 373 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 UBE2V2Q15819 145 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 PRSS8Q16651 343 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 HIST2H2BEQ16778 126 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 ZNF672Q499Z4 452 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 XKR7Q5GH72 579 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 PRAMEF5Q5TYX0 476 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 OR2G6Q5TZ20 316 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 KHDRBS2Q5VWX1 349 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 PRAMEF6Q5VXH4 476 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 REEP3Q6NUK4 255 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 MFSD7Q6UXD7 560 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 TMEM144Q7Z5S9 345 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 LRRTM1Q86UE6 522 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 ZNF100Q8IYN0 542 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 LYG1Q8N1E2 194 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 ZNF738Q8NE65 137 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 OR10W1Q8NGF6 305 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 OR5L1Q8NGL2 311 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 OR4A4PQ8NGN8 299 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 OR1K1Q8NGR3 316 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 OR5AK2Q8NH90 309 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 FAM110DQ8TAY7 271 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 ZCCHC10Q8TBK6 192 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 ZNF596Q8TC21 504 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 ZPLD1Q8TCW7 415 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 RNF133Q8WVZ7 376 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 ASB17Q8WXJ9 295 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 HIST1H2BHQ93079 126 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 HAVCR1Q96D42 359 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 ITCHQ96J02 903 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 PRRC1Q96M27 445 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 TBX15Q96SF7 602 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 GPR22Q99680 433 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 HIST1H2BNQ99877 126 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 HIST1H2BMQ99879 126 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 CITED1Q99966 193 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 KLHDC3Q9BQ90 382 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 MIEN1Q9BRT3 115 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 DEFB126Q9BYW3 111 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 OR2J1Q9GZK6 312 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 SLC25A31Q9H0C2 315 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 RHOFQ9HBH0 211 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 TXNL4BQ9NX01 149 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 PPP1R3CQ9UQK1 317 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 RHBDD3Q9Y3P4 386 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 CCL27Q9Y4X3 112 aa4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 RBM7Q9Y580 266 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-206ENST00000417628 ARL5AQ9Y689 179 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms