RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 TMPPEQ6ZT21 453 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 SLC16A9Q7RTY1 509 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 RD3Q7Z3Z2 195 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 HOGA1Q86XE5 327 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 C11orf42Q8N5U0 333 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 CYB561A3Q8NBI2 242 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 NOXO1Q8NFA2 376 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 OR51D1Q8NGF3 324 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 OR51A2Q8NGJ7 313 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 OR5L2Q8NGL0 311 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 OR6K2Q8NGY2 324 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 OR2L2Q8NH16 312 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 GLYATL1Q969I3 302 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 ZMYND19Q96E35 227 aaPredicted RBP4.72□□□□□ -1.65
CLK1-202ENST00000409403 AMDHD1Q96NU7 426 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 SMIM14Q96QK8 99 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 IMMP2LQ96T52 175 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 AIF1LQ9BQI0 150 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 C16orf70Q9BSU1 422 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 FAAP24Q9BTP7 215 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 RSPO3Q9BXY4 272 aaPredicted RBP4.72□□□□□ -1.65
CLK1-202ENST00000409403 OR2J1Q9GZK6 312 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 SLC26A1Q9H2B4 701 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 SERINC1Q9NRX5 453 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 C1orf123Q9NWV4 160 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 NAGKQ9UJ70 344 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 ZNF346Q9UL40 294 aaKnown RBP4.72□□□□□ -1.65
CLK1-202ENST00000409403 NSG2Q9Y328 171 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 HS3ST3B1Q9Y662 390 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 ZFP37Q9Y6Q3 630 aaPredicted RBP4.72□□□□□ -1.65
CLK1-202ENST00000409403 BSNQ9UPA5 3926 aa4.71□□□□□ -1.65
CLK1-202ENST00000409403 CXorf51AA0A1B0GTR3 108 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 MBLAC1A4D2B0 266 aaPredicted RBP4.71□□□□□ -1.66
CLK1-202ENST00000409403 A6NCN8 305 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 DHRS7CA6NNS2 312 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 RNF212BA8MTL3 300 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 SAP18O00422 153 aaKnown RBP4.71□□□□□ -1.66
CLK1-202ENST00000409403 LDLRAD4O15165 306 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 GPR137BO60478 399 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 B4GALT2O60909 372 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 ALOX12BO75342 701 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 DEDDO75618 318 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 TNFSF13O75888 250 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 NDUFB2O95178 105 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 SYNGR4O95473 234 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 PNPP00491 289 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 HPRT1P00492 218 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 MAS1P04201 325 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 DBIP07108 87 aaKnown RBP4.71□□□□□ -1.66
CLK1-202ENST00000409403 GIMD1P0DJR0 217 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 CT45A8P0DMV1 189 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 CT45A9P0DMV2 189 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 LIPCP11150 499 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 CD59P13987 128 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 RPS4Y1P22090 263 aaKnown RBP4.71□□□□□ -1.66
CLK1-202ENST00000409403 CHRNB4P30926 498 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 GDI1P31150 447 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 APLNRP35414 380 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 ARL3P36405 182 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 ARR3P36575 388 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 PSMB10P40306 273 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 NAA10P41227 235 aaPredicted RBP4.71□□□□□ -1.66
CLK1-202ENST00000409403 ALDH3B1P43353 468 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 OR3A2P47893 321 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 UBE2G2P60604 165 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 ENPP2Q13822 863 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 EIF2B1Q14232 305 aaKnown RBP4.71□□□□□ -1.66
CLK1-202ENST00000409403 ZNF266Q14584 549 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 TRMT12Q53H54 448 aaKnown RBP4.71□□□□□ -1.66
CLK1-202ENST00000409403 CT45A2Q5DJT8 189 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 VAX1Q5SQQ9 334 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 PET117Q6UWS5 81 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 TRAPPC6BQ86SZ2 158 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 SGPP2Q8IWX5 399 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 ZNF100Q8IYN0 542 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 SLC39A11Q8N1S5 342 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 DCAF4L2Q8NA75 395 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 RNF128Q8TEB7 428 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 TMEM170AQ8WVE7 144 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 TSEN15Q8WW01 171 aaKnown RBP4.71□□□□□ -1.66
CLK1-202ENST00000409403 FAM3CQ92520 227 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 FGF13Q92913 245 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 TNFRSF14Q92956 283 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 FAM46BQ96A09 425 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 IGSF21Q96ID5 467 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 SLC35E1Q96K37 410 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 OR7D2Q96RA2 312 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 TP53RKQ96S44 253 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 CABLES2Q9BTV7 478 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 PLA2G2FQ9BZM2 168 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 PCBD2Q9H0N5 130 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 HIPK2Q9H2X6 1198 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 GLIPR2Q9H4G4 154 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.71□□□□□ -1.665e-7■□□□□ 10.8
CLK1-202ENST00000409403 C20orf141Q9NUB4 165 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 P4HTMQ9NXG6 502 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 IKZF2Q9UKS7 526 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 RAB22AQ9UL26 194 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 NINQ8N4C6 2090 aa4.71□□□□□ -1.66
CLK1-202ENST00000409403 SDK2Q58EX2 2172 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms