RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ZNF672Q499Z4 452 aaPredicted RBP17.68■□□□□ 0.42
TPM1-208ENST00000404484 SCGB2B2Q4G0G5 96 aa17.68■□□□□ 0.42
TPM1-208ENST00000404484 Q6ZS49 121 aa17.68■□□□□ 0.42
TPM1-208ENST00000404484 Q8TCH9 128 aa17.68■□□□□ 0.42
TPM1-208ENST00000404484 RDH5Q92781 318 aa17.68■□□□□ 0.42
TPM1-208ENST00000404484 HPS1Q92902 700 aa17.68■□□□□ 0.42
TPM1-208ENST00000404484 PPA2Q9H2U2 334 aa17.68■□□□□ 0.42
TPM1-208ENST00000404484 ANXA10Q9UJ72 324 aa17.68■□□□□ 0.42
TPM1-208ENST00000404484 ALG5Q9Y673 324 aa17.68■□□□□ 0.42
TPM1-208ENST00000404484 HRNRQ86YZ3 2850 aaPredicted RBP17.67■□□□□ 0.42
TPM1-208ENST00000404484 A0A0B4J293 547 aa17.67■□□□□ 0.42
TPM1-208ENST00000404484 ARPC1BO15143 372 aaKnown RBP17.67■□□□□ 0.42
TPM1-208ENST00000404484 SIAH2O43255 324 aa17.67■□□□□ 0.42
TPM1-208ENST00000404484 NAPSAO96009 420 aa17.67■□□□□ 0.42
TPM1-208ENST00000404484 TRAPPC2P0DI81 140 aa17.67■□□□□ 0.42
TPM1-208ENST00000404484 TRAPPC2BP0DI82 140 aa17.67■□□□□ 0.42
TPM1-208ENST00000404484 IRF2P14316 349 aa17.67■□□□□ 0.42
TPM1-208ENST00000404484 MECP2P51608 486 aaKnown RBP17.67■□□□□ 0.42
TPM1-208ENST00000404484 CDK10Q15131 360 aa17.67■□□□□ 0.42
TPM1-208ENST00000404484 GRK1Q15835 563 aa17.67■□□□□ 0.42
TPM1-208ENST00000404484 DYRK2Q92630 601 aa17.67■□□□□ 0.42
TPM1-208ENST00000404484 CYYR1Q96J86 154 aa17.67■□□□□ 0.42
TPM1-208ENST00000404484 RNF7Q9UBF6 113 aa17.67■□□□□ 0.42
TPM1-208ENST00000404484 OR14J1Q9UGF5 321 aa17.67■□□□□ 0.42
TPM1-208ENST00000404484 FBXO9Q9UK97 447 aaPredicted RBP17.67■□□□□ 0.42
TPM1-208ENST00000404484 TRBV6-6A0A0A6YYG2 114 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 SIRPB1O00241 398 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 SLC33A1O00400 549 aaPredicted RBP17.66■□□□□ 0.42
TPM1-208ENST00000404484 HSPB6O14558 160 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 WNT9BO14905 357 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 LMO1P25800 156 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 LOXP28300 417 aaPredicted RBP17.66■□□□□ 0.42
TPM1-208ENST00000404484 KCNJ3P48549 501 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 TSPAN5P62079 268 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 MAFIPQ8WZ33 124 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 NEUROG1Q92886 237 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 WDR13Q9H1Z4 485 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 CLEC4MQ9H2X3 399 aaPredicted RBP17.66■□□□□ 0.42
TPM1-208ENST00000404484 GCM1Q9NP62 436 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 DECR2Q9NUI1 292 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 NECAP2Q9NVZ3 263 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 EHFQ9NZC4 300 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 MYO9AB2RTY4 2548 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 C7orf66A4D0T2 115 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 ZDHHC22Q8N966 263 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 GIMAP1Q8WWP7 306 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 NRGNQ92686 78 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 DNAJB11Q9UBS4 358 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 MGAT4AQ9UM21 535 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 PPP1R3CQ9UQK1 317 aa17.66■□□□□ 0.42
TPM1-208ENST00000404484 KIR2DS1A0A191URI9 304 aa17.65■□□□□ 0.42
TPM1-208ENST00000404484 LRRC30A6NM36 301 aa17.65■□□□□ 0.42
TPM1-208ENST00000404484 PLAUP00749 431 aa17.65■□□□□ 0.42
TPM1-208ENST00000404484 LHBP01229 141 aa17.65■□□□□ 0.42
TPM1-208ENST00000404484 RLN1P04808 185 aa17.65■□□□□ 0.42
TPM1-208ENST00000404484 KIR2DS4P43632 304 aa17.65■□□□□ 0.42
TPM1-208ENST00000404484 SNRPD2P62316 118 aaKnown RBP17.65■□□□□ 0.42
TPM1-208ENST00000404484 KIR2DS1Q14954 304 aa17.65■□□□□ 0.42
TPM1-208ENST00000404484 METTL11BQ5VVY1 283 aa17.65■□□□□ 0.42
TPM1-208ENST00000404484 MOB1BQ7L9L4 216 aa17.65■□□□□ 0.42
TPM1-208ENST00000404484 OVCH2Q7RTZ1 564 aa17.65■□□□□ 0.42
TPM1-208ENST00000404484 GCSAMQ8N6F7 178 aa17.65■□□□□ 0.42
TPM1-208ENST00000404484 CCDC107Q8WV48 283 aa17.65■□□□□ 0.42
TPM1-208ENST00000404484 SCGB3A2Q96PL1 93 aa17.65■□□□□ 0.42
TPM1-208ENST00000404484 SAP30LQ9HAJ7 183 aa17.65■□□□□ 0.42
TPM1-208ENST00000404484 Q9N2K0 584 aa17.65■□□□□ 0.42
TPM1-208ENST00000404484 FLVCR2Q9UPI3 526 aa17.65■□□□□ 0.42
TPM1-208ENST00000404484 WIPI2Q9Y4P8 454 aa17.65■□□□□ 0.42
TPM1-208ENST00000404484 ANKRD17O75179 2603 aaKnown RBP17.64■□□□□ 0.41
TPM1-208ENST00000404484 IL5P05113 134 aa17.64■□□□□ 0.41
TPM1-208ENST00000404484 ECI1P42126 302 aa17.64■□□□□ 0.41
TPM1-208ENST00000404484 MUC15Q8N387 334 aa17.64■□□□□ 0.41
TPM1-208ENST00000404484 OR13C8Q8NGS7 320 aa17.64■□□□□ 0.41
TPM1-208ENST00000404484 TERB2Q8NHR7 220 aa17.64■□□□□ 0.41
TPM1-208ENST00000404484 MED30Q96HR3 178 aa17.64■□□□□ 0.41
TPM1-208ENST00000404484 TMEM165Q9HC07 324 aa17.64■□□□□ 0.41
TPM1-208ENST00000404484 GPN1Q9HCN4 374 aaPredicted RBP17.64■□□□□ 0.41
TPM1-208ENST00000404484 CHD3Q12873 2000 aaKnown RBP17.64■□□□□ 0.41
TPM1-208ENST00000404484 TMEM82A0PJX8 343 aa17.63■□□□□ 0.41
TPM1-208ENST00000404484 HMX3A6NHT5 357 aa17.63■□□□□ 0.41
TPM1-208ENST00000404484 RFPL4AA6NLU0 287 aa17.63■□□□□ 0.41
TPM1-208ENST00000404484 RFPL4AL1F8VTS6 287 aa17.63■□□□□ 0.41
TPM1-208ENST00000404484 EGR1P18146 543 aa17.63■□□□□ 0.41
TPM1-208ENST00000404484 CCL8P80075 99 aa17.63■□□□□ 0.41
TPM1-208ENST00000404484 CARTPTQ16568 116 aa17.63■□□□□ 0.41
TPM1-208ENST00000404484 SPRNQ5BIV9 151 aa17.63■□□□□ 0.41
TPM1-208ENST00000404484 AKAP14Q86UN6 197 aa17.63■□□□□ 0.41
TPM1-208ENST00000404484 LILRB1Q8NHL6 650 aaPredicted RBP17.63■□□□□ 0.41
TPM1-208ENST00000404484 DACT3Q96B18 629 aaPredicted RBP17.63■□□□□ 0.41
TPM1-208ENST00000404484 NEURL2Q9BR09 285 aa17.63■□□□□ 0.41
TPM1-208ENST00000404484 IGKV1D-8A0A087WSZ0 117 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 A0A1W2PPR1 153 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 ZNF497Q6ZNH5 498 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 C1orf87Q8N0U7 546 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 GAPTQ8N292 157 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 BOLLQ8N9W6 283 aaKnown RBP17.62■□□□□ 0.41
TPM1-208ENST00000404484 OR6F1Q8NGZ6 308 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 PPP1R35Q8TAP8 253 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 MRPL30Q8TCC3 161 aaKnown RBP17.62■□□□□ 0.41
TPM1-208ENST00000404484 ALX4Q9H161 411 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms