RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 TAAR3PQ9P1P4 343 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 TMED3Q9Y3Q3 217 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 CDX1P47902 265 aaPredicted RBP11.96□□□□□ -0.49
NUP98-204ENST00000397004 C20orf204Q6ZNR8 217 aa11.96□□□□□ -0.49
NUP98-204ENST00000397004 MAML2Q8IZL2 1156 aaPredicted RBP11.96□□□□□ -0.49
NUP98-204ENST00000397004 SPTSSAQ969W0 71 aa11.96□□□□□ -0.49
NUP98-204ENST00000397004 BORCS8Q96FH0 119 aa11.96□□□□□ -0.49
NUP98-204ENST00000397004 TMEM56Q96MV1 263 aa11.96□□□□□ -0.49
NUP98-204ENST00000397004 SSX3Q99909 188 aa11.96□□□□□ -0.49
NUP98-204ENST00000397004 WNT5BQ9H1J7 359 aa11.96□□□□□ -0.49
NUP98-204ENST00000397004 VSIRQ9H7M9 311 aa11.96□□□□□ -0.49
NUP98-204ENST00000397004 SLC7A11Q9UPY5 501 aa11.96□□□□□ -0.49
NUP98-204ENST00000397004 TMEM56-RWDD3S4R434 201 aa11.96□□□□□ -0.49
NUP98-204ENST00000397004 CHD3Q12873 2000 aaKnown RBP11.96□□□□□ -0.49
NUP98-204ENST00000397004 SCAF4O95104 1147 aaKnown RBP11.96□□□□□ -0.49
NUP98-204ENST00000397004 B3GALT5-AS1P59052 145 aa11.96□□□□□ -0.49
NUP98-204ENST00000397004 PDZD11Q5EBL8 140 aa11.96□□□□□ -0.49
NUP98-204ENST00000397004 ZNF100Q8IYN0 542 aa11.96□□□□□ -0.49
NUP98-204ENST00000397004 GAPTQ8N292 157 aa11.96□□□□□ -0.49
NUP98-204ENST00000397004 CLDND2Q8NHS1 167 aa11.96□□□□□ -0.49
NUP98-204ENST00000397004 PI4KAP42356 2102 aa11.96□□□□□ -0.49
NUP98-204ENST00000397004 KIAA1324LA8MWY0 1029 aaPredicted RBP11.96□□□□□ -0.5
NUP98-204ENST00000397004 PDCD6O75340 191 aa11.96□□□□□ -0.5
NUP98-204ENST00000397004 PITX3O75364 302 aa11.96□□□□□ -0.5
NUP98-204ENST00000397004 TRGC2P03986 189 aa11.96□□□□□ -0.5
NUP98-204ENST00000397004 JMJD7P0C870 316 aa11.96□□□□□ -0.5
NUP98-204ENST00000397004 TAGLN2P37802 199 aaKnown RBP11.96□□□□□ -0.5
NUP98-204ENST00000397004 SLC34A2O95436 690 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 GPX4P36969 197 aaPredicted RBP11.95□□□□□ -0.5
NUP98-204ENST00000397004 CPEB3Q8NE35 698 aaKnown RBP11.95□□□□□ -0.5
NUP98-204ENST00000397004 PBDC1Q9BVG4 233 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 KIAA2026Q5HYC2 2103 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 TNFSF12O43508 249 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 GUCA1AP43080 201 aaPredicted RBP11.95□□□□□ -0.5
NUP98-204ENST00000397004 NKX2-1P43699 371 aaPredicted RBP11.95□□□□□ -0.5
NUP98-204ENST00000397004 ID3Q02535 119 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 RAB35Q15286 201 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 TSC22D1Q15714 1073 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 IGFBP7Q16270 282 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 ZNF600Q6ZNG1 722 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 ZNF383Q8NA42 475 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 GPR61Q9BZJ8 451 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 BCO1Q9HAY6 547 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 TMEM38BQ9NVV0 291 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 ZNF716A6NP11 495 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 OR7C1O76099 320 aaPredicted RBP11.95□□□□□ -0.5
NUP98-204ENST00000397004 CDS2O95674 445 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 TCN2P20062 427 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 Q6ZRM9 215 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 ZNF429Q86V71 674 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 GPR137CQ8N3F9 429 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 C17orf78Q8N4C9 275 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 RHOVQ96L33 236 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 SYT3Q9BQG1 590 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 TCEAL7Q9BRU2 100 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 ZNF286AQ9HBT8 521 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 PRDM6Q9NQX0 595 aa11.95□□□□□ -0.5
NUP98-204ENST00000397004 ARHGAP21Q5T5U3 1957 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 SLC22A20A6NK97 555 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 HSPB6O14558 160 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 CHST1O43916 411 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 RAB1AP62820 205 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 ZNF726P1Q15940 193 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 SLC25A26Q70HW3 274 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 P4HA3Q7Z4N8 544 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 GGNQ86UU5 652 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 ZNF611Q8N823 705 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 PIGCQ92535 297 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 IMMP1LQ96LU5 166 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 CCDC74BQ96LY2 380 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 KIAA1456Q9P272 454 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 DMRT1Q9Y5R6 373 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 DSPP15924 2871 aaKnown RBP11.94□□□□□ -0.5
NUP98-204ENST00000397004 H3BP45 60 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 RFPL3SP0C7P2 107 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 OR14L1PQ8NHC6 308 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 CCL28Q9NRJ3 127 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 PRRC2CQ9Y520 2896 aaKnown RBP11.94□□□□□ -0.5
NUP98-204ENST00000397004 ZNF729A6NN14 1252 aaPredicted RBP11.94□□□□□ -0.5
NUP98-204ENST00000397004 BCAT2O15382 392 aaPredicted RBP11.94□□□□□ -0.5
NUP98-204ENST00000397004 AFF3P51826 1226 aaKnown RBP11.94□□□□□ -0.5
NUP98-204ENST00000397004 GNMTQ14749 295 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 LHFPL2Q6ZUX7 228 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 IL36GQ9NZH8 169 aa11.94□□□□□ -0.5
NUP98-204ENST00000397004 COLQQ9Y215 455 aaPredicted RBP11.94□□□□□ -0.5
NUP98-204ENST00000397004 IGHV1-45A0A0A0MS14 117 aa11.93□□□□□ -0.5
NUP98-204ENST00000397004 ZNF732B4DXR9 585 aa11.93□□□□□ -0.5
NUP98-204ENST00000397004 FAM90A2PQ658T7 463 aa11.93□□□□□ -0.5
NUP98-204ENST00000397004 DNASE2BQ8WZ79 361 aa11.93□□□□□ -0.5
NUP98-204ENST00000397004 PCSK5Q92824 1860 aa11.93□□□□□ -0.5
NUP98-204ENST00000397004 RPL36A-HNRNPH2H7BZ11 118 aa11.93□□□□□ -0.5
NUP98-204ENST00000397004 KLF7O75840 302 aaPredicted RBP11.93□□□□□ -0.5
NUP98-204ENST00000397004 IFNA17P01571 189 aa11.93□□□□□ -0.5
NUP98-204ENST00000397004 BCL3P20749 454 aa11.93□□□□□ -0.5
NUP98-204ENST00000397004 MDKP21741 143 aaPredicted RBP11.93□□□□□ -0.5
NUP98-204ENST00000397004 ARL16Q0P5N6 197 aa11.93□□□□□ -0.5
NUP98-204ENST00000397004 OR8B8Q15620 311 aa11.93□□□□□ -0.5
NUP98-204ENST00000397004 ZNF506Q5JVG8 444 aa11.93□□□□□ -0.5
NUP98-204ENST00000397004 TMEM211Q6ICI0 200 aa11.93□□□□□ -0.5
NUP98-204ENST00000397004 YRDCQ86U90 279 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms