RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 OR9A2Q8NGT5 310 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 STOML3Q8TAV4 291 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 ZNF596Q8TC21 504 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 DYNC2LI1Q8TCX1 351 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 ZFP90Q8TF47 636 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 PIH1D2Q8WWB5 315 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 MAFIPQ8WZ33 124 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 NRGNQ92686 78 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 ZNF707Q96C28 371 aaPredicted RBP1.97□□□□□ -2.09
PTPRC-205ENST00000391970 SMIM12Q96EX1 92 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 PRAP1Q96NZ9 151 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 RNF157Q96PX1 679 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 OR5B12Q96R08 314 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 OR2V2Q96R30 315 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 OR52B2Q96RD2 323 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 SDHCQ99643 169 aaPredicted RBP1.97□□□□□ -2.09
PTPRC-205ENST00000391970 RBBP8Q99708 897 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 TMEM208Q9BTX3 173 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 ZNF426Q9BUY5 554 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 SLC17A9Q9BYT1 436 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 SLIRPQ9GZT3 109 aaKnown RBP1.97□□□□□ -2.09
PTPRC-205ENST00000391970 CXorf21Q9HAI6 301 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 CACYBPQ9HB71 228 aaKnown RBP1.97□□□□□ -2.09
PTPRC-205ENST00000391970 MYOZ2Q9NPC6 264 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 KCNJ16Q9NPI9 418 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 NIT2Q9NQR4 276 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 SIRT7Q9NRC8 400 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 HRASLS2Q9NWW9 162 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 DDIT4Q9NX09 232 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 CALML5Q9NZT1 146 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 VAPAQ9P0L0 249 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 ZNF223Q9UK11 482 aaPredicted RBP1.97□□□□□ -2.09
PTPRC-205ENST00000391970 NDRG2Q9UN36 371 aaKnown RBP1.97□□□□□ -2.09
PTPRC-205ENST00000391970 SSR3Q9UNL2 185 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 PSG8Q9UQ74 426 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 BAIAP2Q9UQB8 552 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 CARHSP1Q9Y2V2 147 aaKnown RBP1.97□□□□□ -2.09
PTPRC-205ENST00000391970 ALG5Q9Y673 324 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 TNS3Q68CZ2 1445 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 GLI3P10071 1580 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 A0A0G2JMZ2 1700 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 LRRC37A2A6NM11 1700 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 LRRC37AA6NMS7 1700 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 PHLPP1O60346 1717 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 ALS2Q96Q42 1657 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 BTAF1O14981 1849 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 IGSF9BQ9UPX0 1349 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 NUP153P49790 1475 aaKnown RBP1.96□□□□□ -2.1
PTPRC-205ENST00000391970 DEPDC5O75140 1603 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 DLG5Q8TDM6 1919 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 A0A087WUJ7 227 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 TRAV25A0A0B4J276 109 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 IGHV3-66A0A0C4DH42 116 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 A0A1B0GUH1 482 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 TMEM218A2RU14 115 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 SERPINE3A8MV23 424 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 A8MWP6 167 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 MRASO14807 208 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 GYG2O15488 501 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 ARPC5O15511 151 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 RAD51CO43502 376 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 EIF4E2O60573 245 aaKnown RBP1.96□□□□□ -2.1
PTPRC-205ENST00000391970 SC5DO75845 299 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 OR2B3O76000 313 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 BRI3O95415 125 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 FADS2O95864 444 aaKnown RBP1.96□□□□□ -2.1
PTPRC-205ENST00000391970 GIMD1P0DJR0 217 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 BCKDHBP21953 392 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 G0S2P27469 103 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 GGT2P36268 569 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 RPL35P42766 123 aaKnown RBP1.96□□□□□ -2.1
PTPRC-205ENST00000391970 MAGEA3P43357 314 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 EVX1P49640 407 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 ERFP50548 548 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 ZNF138P52744 262 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 AQP5P55064 265 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 DAOAP59103 153 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 DEFA1P59665 94 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 DEFA3P59666 94 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 DNAJB13P59910 316 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 HERVK_113P61574 105 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 GNA12Q03113 381 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 TPBGQ13641 420 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 RCAN2Q14206 197 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 GPR176Q14439 515 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 PTGES3Q15185 160 aaKnown RBP1.96□□□□□ -2.1
PTPRC-205ENST00000391970 TMED2Q15363 201 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 SF3A2Q15428 464 aaKnown RBP1.96□□□□□ -2.1
PTPRC-205ENST00000391970 TAF1AQ15573 450 aaPredicted RBP1.96□□□□□ -2.1
PTPRC-205ENST00000391970 POU2AF1Q16633 256 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 C18orf21Q32NC0 220 aaPredicted RBP1.96□□□□□ -2.1
PTPRC-205ENST00000391970 HAGHLQ6PII5 290 aaPredicted RBP1.96□□□□□ -2.1
PTPRC-205ENST00000391970 WDR59Q6PJI9 974 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 TMEM220Q6QAJ8 160 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 TIFABQ6ZNK6 161 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 SLC35D2Q76EJ3 337 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 LINC01551Q86U37 167 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 COMMD7Q86VX2 200 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 UNC93AQ86WB7 457 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 WDFY1Q8IWB7 410 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms