RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 FAHD1Q6P587 224 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 OR1L6Q8NGR2 347 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 DUSP21Q9H596 190 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 CA10Q9NS85 328 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 OOEPA6NGQ2 149 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 RNASE1P07998 156 aaKnown RBP11.09□□□□□ -0.63
VPS13A-204ENST00000376634 AVPR2P30518 371 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 JMJD6Q6NYC1 403 aaPredicted RBP11.09□□□□□ -0.63
VPS13A-204ENST00000376634 VN1R1Q9GZP7 353 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 SAP30LQ9HAJ7 183 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 C1RLQ9NZP8 487 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 RBFOX3A6NFN3 312 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 CD226Q15762 336 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 MS4A4AQ96JQ5 239 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 CXXC4Q9H2H0 198 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 LPAR3Q9UBY5 353 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 OR4A47Q6IF82 309 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 CRISPLD2Q9H0B8 497 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 Q9N2K0 584 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 TMEM140Q9NV12 185 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 NAT8Q9UHE5 227 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 BHLHA15Q7RTS1 189 aaPredicted RBP11.09□□□□□ -0.63
VPS13A-204ENST00000376634 ZNF683Q8IZ20 524 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 D2HGDHQ8N465 521 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 CREBBPQ92793 2442 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 A0A0B4J2E0 115 aa11.08□□□□□ -0.63
VPS13A-204ENST00000376634 A0A1B0GX12 115 aa11.08□□□□□ -0.63
VPS13A-204ENST00000376634 TRDCB7Z8K6 153 aa11.08□□□□□ -0.63
VPS13A-204ENST00000376634 PDE6DO43924 150 aa11.08□□□□□ -0.63
VPS13A-204ENST00000376634 LYZL6O75951 148 aa11.08□□□□□ -0.63
VPS13A-204ENST00000376634 NDUFB6O95139 128 aa11.08□□□□□ -0.63
VPS13A-204ENST00000376634 MBPP02686 304 aaPredicted RBP11.08□□□□□ -0.63
VPS13A-204ENST00000376634 SUCLG1P53597 346 aaKnown RBP11.08□□□□□ -0.63
VPS13A-204ENST00000376634 MRGPRDQ8TDS7 321 aa11.08□□□□□ -0.63
VPS13A-204ENST00000376634 TEX101Q9BY14 249 aa11.08□□□□□ -0.63
VPS13A-204ENST00000376634 IL17BQ9UHF5 180 aa11.08□□□□□ -0.63
VPS13A-204ENST00000376634 A0A1W2PPC4 97 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 A0A1W2PR80 420 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 HAND1O96004 215 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 C9orf170A2RU37 121 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 COL8A1P27658 744 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 UQCRFS1P47985 274 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 CD3EP07766 207 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 IL13RA2Q14627 380 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 RAB24Q969Q5 203 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 C4orf45Q96LM5 186 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 MGAMO43451 1857 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 RER1O15258 196 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 ACTL6AO96019 429 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 PPP1R1AQ13522 171 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 ADAT3Q96EY9 351 aaPredicted RBP11.08□□□□□ -0.64
VPS13A-204ENST00000376634 PDFQ9HBH1 243 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 AUP1Q9Y679 476 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 SCN10AQ9Y5Y9 1956 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 SLC6A1P30531 599 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 TMEM251Q8N6I4 163 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 NUDT8Q8WV74 236 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 STARD4Q96DR4 205 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 PIK3IP1Q96FE7 263 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 LPAR5Q9H1C0 372 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 AKIP1Q9NQ31 210 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 PLA2G3Q9NZ20 509 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 FBLL1A6NHQ2 334 aaKnown RBP11.08□□□□□ -0.64
VPS13A-204ENST00000376634 FCMRO60667 390 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 APCSP02743 223 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 CD82P27701 267 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 HMGA1P17096 107 aaKnown RBP11.08□□□□□ -0.64
VPS13A-204ENST00000376634 SPICQ8N5J4 248 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 CES1P1Q9UKY3 287 aa11.08□□□□□ -0.64
VPS13A-204ENST00000376634 NHSL1Q5SYE7 1610 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 FBXL6Q8N531 539 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 OR4A8P0C604 315 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 TTC32Q5I0X7 151 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 OR8I2Q8N0Y5 310 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 BCL7CQ8WUZ0 217 aaPredicted RBP11.07□□□□□ -0.64
VPS13A-204ENST00000376634 PAM16Q9Y3D7 125 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 GALP22466 123 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 EIF3IQ13347 325 aaKnown RBP11.07□□□□□ -0.64
VPS13A-204ENST00000376634 FAM74A3Q4VXF1 159 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 OR5AU1Q8NGC0 362 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 OR4D9Q8NGE8 314 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 LINC00052Q96N35 136 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 B4DEV8 164 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 FABP2P12104 132 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 Q7L0L9 218 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 OR10D3Q8NH80 312 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 ZNF25P17030 456 aaPredicted RBP11.07□□□□□ -0.64
VPS13A-204ENST00000376634 PRSS42Q7Z5A4 293 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 ABHD14AQ9BUJ0 271 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 C19orf54Q5BKX5 351 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 FAM24BQ8N5W8 94 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 OR10A7Q8NGE5 316 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 RFESDQ8TAC1 157 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 PDCD6O75340 191 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 TRA2AQ13595 282 aaKnown RBP eCLIP11.07□□□□□ -0.64
VPS13A-204ENST00000376634 SSPNQ14714 243 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 PABPC1L2AQ5JQF8 200 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 SLC25A30Q5SVS4 291 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 GPR61Q9BZJ8 451 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 ZNF385DQ9H6B1 395 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms