RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 MYOZ1Q9NP98 299 aaPredicted RBP22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 DECR2Q9NUI1 292 aa22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 PPP1R3CQ9UQK1 317 aa22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 EGR1P18146 543 aa22.12■■□□□ 1.13
ATPAF1-202ENST00000371937 LOXP28300 417 aaPredicted RBP22.12■■□□□ 1.13
ATPAF1-202ENST00000371937 CCL8P80075 99 aa22.12■■□□□ 1.13
ATPAF1-202ENST00000371937 SLC36A1Q7Z2H8 476 aa22.12■■□□□ 1.13
ATPAF1-202ENST00000371937 LHFPL1Q86WI0 220 aa22.12■■□□□ 1.13
ATPAF1-202ENST00000371937 MRPL30Q8TCC3 161 aaKnown RBP22.12■■□□□ 1.13
ATPAF1-202ENST00000371937 WIPI2Q9Y4P8 454 aa22.12■■□□□ 1.13
ATPAF1-202ENST00000371937 ROS1P08922 2347 aa22.12■■□□□ 1.13
ATPAF1-202ENST00000371937 CEACAM18A8MTB9 384 aa22.11■■□□□ 1.13
ATPAF1-202ENST00000371937 SNRPGP15A8MWD9 76 aa22.11■■□□□ 1.13
ATPAF1-202ENST00000371937 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP22.11■■□□□ 1.13
ATPAF1-202ENST00000371937 IRF2P14316 349 aa22.11■■□□□ 1.13
ATPAF1-202ENST00000371937 BOLLQ8N9W6 283 aaKnown RBP22.11■■□□□ 1.13
ATPAF1-202ENST00000371937 LILRB1Q8NHL6 650 aaPredicted RBP22.11■■□□□ 1.13
ATPAF1-202ENST00000371937 BBC3Q96PG8 261 aaPredicted RBP22.11■■□□□ 1.13
ATPAF1-202ENST00000371937 KCNJ3P48549 501 aa22.1■■□□□ 1.13
ATPAF1-202ENST00000371937 CEBPDP49716 269 aaPredicted RBP22.1■■□□□ 1.13
ATPAF1-202ENST00000371937 HOXA4Q00056 320 aaPredicted RBP22.1■■□□□ 1.13
ATPAF1-202ENST00000371937 ZNF497Q6ZNH5 498 aa22.1■■□□□ 1.13
ATPAF1-202ENST00000371937 TMED4Q7Z7H5 227 aa22.1■■□□□ 1.13
ATPAF1-202ENST00000371937 VSIG4Q9Y279 399 aa22.1■■□□□ 1.13
ATPAF1-202ENST00000371937 CREBL2O60519 120 aaPredicted RBP22.1■■□□□ 1.13
ATPAF1-202ENST00000371937 PRDX2P32119 198 aa22.1■■□□□ 1.13
ATPAF1-202ENST00000371937 ECI1P42126 302 aa22.1■■□□□ 1.13
ATPAF1-202ENST00000371937 MST1LQ2TV78 715 aa22.1■■□□□ 1.13
ATPAF1-202ENST00000371937 CD276Q5ZPR3 534 aa22.1■■□□□ 1.13
ATPAF1-202ENST00000371937 DHRS11Q6UWP2 260 aa22.1■■□□□ 1.13
ATPAF1-202ENST00000371937 MOB1BQ7L9L4 216 aa22.1■■□□□ 1.13
ATPAF1-202ENST00000371937 GAPTQ8N292 157 aa22.1■■□□□ 1.13
ATPAF1-202ENST00000371937 SAP30LQ9HAJ7 183 aa22.1■■□□□ 1.13
ATPAF1-202ENST00000371937 MGAT4AQ9UM21 535 aa22.1■■□□□ 1.13
ATPAF1-202ENST00000371937 LRRC30A6NM36 301 aa22.09■■□□□ 1.13
ATPAF1-202ENST00000371937 TRDCB7Z8K6 153 aa22.09■■□□□ 1.13
ATPAF1-202ENST00000371937 SSNA1O43805 119 aa22.09■■□□□ 1.13
ATPAF1-202ENST00000371937 PSPNO60542 156 aa22.09■■□□□ 1.13
ATPAF1-202ENST00000371937 HPXP02790 462 aa22.09■■□□□ 1.13
ATPAF1-202ENST00000371937 GSTT2P0CG29 244 aa22.09■■□□□ 1.13
ATPAF1-202ENST00000371937 VSIG10L2P0DP72 767 aa22.09■■□□□ 1.13
ATPAF1-202ENST00000371937 PSG2P11465 335 aa22.09■■□□□ 1.13
ATPAF1-202ENST00000371937 CD300CQ08708 224 aa22.09■■□□□ 1.13
ATPAF1-202ENST00000371937 AADACL3Q5VUY0 350 aa22.09■■□□□ 1.13
ATPAF1-202ENST00000371937 ZNF880Q6PDB4 577 aa22.09■■□□□ 1.13
ATPAF1-202ENST00000371937 MUC15Q8N387 334 aa22.09■■□□□ 1.13
ATPAF1-202ENST00000371937 MARCH1Q8TCQ1 289 aa22.09■■□□□ 1.13
ATPAF1-202ENST00000371937 SEC22CQ9BRL7 303 aa22.09■■□□□ 1.13
ATPAF1-202ENST00000371937 ZNF2Q9BSG1 426 aaPredicted RBP22.09■■□□□ 1.13
ATPAF1-202ENST00000371937 NPY4RP50391 375 aa22.08■■□□□ 1.13
ATPAF1-202ENST00000371937 COL10A1Q03692 680 aa22.08■■□□□ 1.13
ATPAF1-202ENST00000371937 SURF2Q15527 256 aaPredicted RBP22.08■■□□□ 1.13
ATPAF1-202ENST00000371937 C4orf46Q504U0 113 aa22.08■■□□□ 1.13
ATPAF1-202ENST00000371937 ZCCHC24Q8N2G6 241 aaKnown RBP22.08■■□□□ 1.13
ATPAF1-202ENST00000371937 PLPPR1Q8TBJ4 325 aa22.08■■□□□ 1.13
ATPAF1-202ENST00000371937 SPTBN1Q01082 2364 aaKnown RBP22.08■■□□□ 1.13
ATPAF1-202ENST00000371937 FABP7O15540 132 aa22.08■■□□□ 1.12
ATPAF1-202ENST00000371937 PRB1P04280 392 aa22.08■■□□□ 1.12
ATPAF1-202ENST00000371937 CTXN2P0C2S0 81 aa22.08■■□□□ 1.12
ATPAF1-202ENST00000371937 FPR2P25090 351 aa22.08■■□□□ 1.12
ATPAF1-202ENST00000371937 GLP1RP43220 463 aa22.08■■□□□ 1.12
ATPAF1-202ENST00000371937 ATXN7L3Q14CW9 347 aaPredicted RBP22.08■■□□□ 1.12
ATPAF1-202ENST00000371937 SWI5Q1ZZU3 235 aa22.08■■□□□ 1.12
ATPAF1-202ENST00000371937 ZNF626Q68DY1 528 aa22.08■■□□□ 1.12
ATPAF1-202ENST00000371937 ZNF660Q6AZW8 331 aaPredicted RBP22.08■■□□□ 1.12
ATPAF1-202ENST00000371937 C20orf204Q6ZNR8 217 aa22.08■■□□□ 1.12
ATPAF1-202ENST00000371937 OR5T2Q8NGG2 359 aa22.08■■□□□ 1.12
ATPAF1-202ENST00000371937 EPG5Q9HCE0 2579 aa22.07■■□□□ 1.12
ATPAF1-202ENST00000371937 OR4E1P0C645 316 aa22.07■■□□□ 1.12
ATPAF1-202ENST00000371937 FAHD2BQ6P2I3 314 aaPredicted RBP22.07■■□□□ 1.12
ATPAF1-202ENST00000371937 SLC25A42Q86VD7 318 aa22.07■■□□□ 1.12
ATPAF1-202ENST00000371937 CD177Q8N6Q3 437 aa22.07■■□□□ 1.12
ATPAF1-202ENST00000371937 FAM222BQ8WU58 562 aa22.07■■□□□ 1.12
ATPAF1-202ENST00000371937 FAHD2AQ96GK7 314 aa22.07■■□□□ 1.12
ATPAF1-202ENST00000371937 ZNF69Q9UC07 566 aa22.07■■□□□ 1.12
ATPAF1-202ENST00000371937 GPR132Q9UNW8 380 aa22.07■■□□□ 1.12
ATPAF1-202ENST00000371937 IGKV1D-17A0A075B6S4 117 aa22.06■■□□□ 1.12
ATPAF1-202ENST00000371937 SNRPD2P62316 118 aaKnown RBP22.06■■□□□ 1.12
ATPAF1-202ENST00000371937 PEG10Q86TG7 708 aaKnown RBP22.06■■□□□ 1.12
ATPAF1-202ENST00000371937 ZNF843Q8N446 348 aa22.06■■□□□ 1.12
ATPAF1-202ENST00000371937 TRAPPC2LQ9UL33 140 aa22.06■■□□□ 1.12
ATPAF1-202ENST00000371937 TMEM30CPA0ZSE6 113 aa22.06■■□□□ 1.12
ATPAF1-202ENST00000371937 OR5H14A6NHG9 310 aa22.06■■□□□ 1.12
ATPAF1-202ENST00000371937 BOLA2-SMG1P6H3BVE0 249 aa22.06■■□□□ 1.12
ATPAF1-202ENST00000371937 TAS2R31P59538 309 aa22.06■■□□□ 1.12
ATPAF1-202ENST00000371937 SLC35E4Q6ICL7 350 aa22.06■■□□□ 1.12
ATPAF1-202ENST00000371937 ASCC1Q8N9N2 400 aaKnown RBP22.06■■□□□ 1.12
ATPAF1-202ENST00000371937 PPP1R35Q8TAP8 253 aa22.06■■□□□ 1.12
ATPAF1-202ENST00000371937 CAPSLQ8WWF8 208 aa22.06■■□□□ 1.12
ATPAF1-202ENST00000371937 ST6GAL2Q96JF0 529 aa22.06■■□□□ 1.12
ATPAF1-202ENST00000371937 ING3Q9NXR8 418 aa22.06■■□□□ 1.12
ATPAF1-202ENST00000371937 ZNF221Q9UK13 617 aa22.06■■□□□ 1.12
ATPAF1-202ENST00000371937 CACNA1DQ01668 2161 aa22.05■■□□□ 1.12
ATPAF1-202ENST00000371937 CYB5R3P00387 301 aaPredicted RBP22.05■■□□□ 1.12
ATPAF1-202ENST00000371937 SCTP09683 121 aa22.05■■□□□ 1.12
ATPAF1-202ENST00000371937 FCN2Q15485 313 aa22.05■■□□□ 1.12
ATPAF1-202ENST00000371937 C17orf107Q6ZR85 190 aa22.05■■□□□ 1.12
ATPAF1-202ENST00000371937 C1orf87Q8N0U7 546 aa22.05■■□□□ 1.12
ATPAF1-202ENST00000371937 OR4A4PQ8NGN8 299 aa22.05■■□□□ 1.12
ATPAF1-202ENST00000371937 FBXO9Q9UK97 447 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms