RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 CAPNS2Q96L46 248 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 Q96M66 194 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 RBKSQ9H477 322 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 TMEM210A6NLX4 147 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 MPPED1O15442 326 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 TSPAN2O60636 221 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 DDAH2O95865 285 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 HPRT1P00492 218 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 CEACAM1P13688 526 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 TESK1Q15569 626 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 BSXQ3C1V8 233 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 SP5Q6BEB4 398 aaPredicted RBP13.29□□□□□ -0.28
LMNA-201ENST00000347559 SSX7Q7RTT5 188 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 H1FOOQ8IZA3 346 aaPredicted RBP13.29□□□□□ -0.28
LMNA-201ENST00000347559 CARFQ8N187 725 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 ZNF721Q8TF20 911 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 ACY3Q96HD9 319 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 ATP5SQ99766 215 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 B4E171 279 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 LINC00271P0C7V0 271 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 TSPAN7P41732 249 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 SMAD4Q13485 552 aaKnown RBP13.28□□□□□ -0.28
LMNA-201ENST00000347559 COA6Q5JTJ3 125 aaKnown RBP13.28□□□□□ -0.28
LMNA-201ENST00000347559 D2HGDHQ8N465 521 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 OR51G1Q8NGK1 321 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 OR5L2Q8NGL0 311 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 OR10G4Q8NGN3 311 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 TMEM170AQ8WVE7 144 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 C11orf1Q9H5F2 150 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 CCKARP32238 428 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 RPS18P62269 152 aaKnown RBP13.28□□□□□ -0.28
LMNA-201ENST00000347559 MRPS11P82912 194 aaKnown RBP13.28□□□□□ -0.28
LMNA-201ENST00000347559 TMEM241Q24JQ0 296 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 PIGYQ3MUY2 71 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 TMEM234Q8WY98 164 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 MS4A10Q96PG2 267 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 SPIN2AQ99865 258 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 SPIN2BQ9BPZ2 258 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 NCOA6Q14686 2063 aaPredicted RBP13.28□□□□□ -0.28
LMNA-201ENST00000347559 A0A1W2PR80 420 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 LRRC3CA6NJW4 275 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 CA11O75493 328 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 FOXL2P58012 376 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 THEM4Q5T1C6 240 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 TOMM20LQ6UXN7 152 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 Q6ZSR6 202 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 ZNF573Q86YE8 665 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 CALHM1Q8IU99 346 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 TMEM256Q8N2U0 113 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 SCGB1C1Q8TD33 95 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 FBRSQ9HAH7 460 aa13.28□□□□□ -0.28
LMNA-201ENST00000347559 MRPS18CQ9Y3D5 142 aaKnown RBP13.28□□□□□ -0.28
LMNA-201ENST00000347559 ZNF41P51814 821 aaPredicted RBP13.27□□□□□ -0.28
LMNA-201ENST00000347559 ANKRD39Q53RE8 183 aa13.27□□□□□ -0.28
LMNA-201ENST00000347559 TBC1D26Q86UD7 250 aa13.27□□□□□ -0.28
LMNA-201ENST00000347559 TMEM222Q9H0R3 208 aa13.27□□□□□ -0.28
LMNA-201ENST00000347559 ZNF286AQ9HBT8 521 aa13.27□□□□□ -0.28
LMNA-201ENST00000347559 LPAR2Q9HBW0 351 aa13.27□□□□□ -0.28
LMNA-201ENST00000347559 Q9N2K0 584 aa13.27□□□□□ -0.28
LMNA-201ENST00000347559 PARD6AQ9NPB6 346 aa13.27□□□□□ -0.28
LMNA-201ENST00000347559 NAT8Q9UHE5 227 aa13.27□□□□□ -0.28
LMNA-201ENST00000347559 ETV2O00321 342 aaPredicted RBP13.27□□□□□ -0.29
LMNA-201ENST00000347559 TP53I11O14683 189 aa13.27□□□□□ -0.29
LMNA-201ENST00000347559 GALR2O43603 387 aaPredicted RBP13.27□□□□□ -0.29
LMNA-201ENST00000347559 IGHG1P01857 330 aa13.27□□□□□ -0.29
LMNA-201ENST00000347559 IGKV3-11P04433 115 aa13.27□□□□□ -0.29
LMNA-201ENST00000347559 CLDN17P56750 224 aa13.27□□□□□ -0.29
LMNA-201ENST00000347559 MLF1P58340 268 aa13.27□□□□□ -0.29
LMNA-201ENST00000347559 RPP30P78346 268 aaKnown RBP13.27□□□□□ -0.29
LMNA-201ENST00000347559 ZP4Q12836 540 aa13.27□□□□□ -0.29
LMNA-201ENST00000347559 NSDHLQ15738 373 aa13.27□□□□□ -0.29
LMNA-201ENST00000347559 ZNF726P1Q15940 193 aa13.27□□□□□ -0.29
LMNA-201ENST00000347559 YAF2Q8IY57 180 aa13.27□□□□□ -0.29
LMNA-201ENST00000347559 MAML2Q8IZL2 1156 aaPredicted RBP13.27□□□□□ -0.29
LMNA-201ENST00000347559 MOB3AQ96BX8 217 aa13.27□□□□□ -0.29
LMNA-201ENST00000347559 PLK3Q9H4B4 646 aa13.27□□□□□ -0.29
LMNA-201ENST00000347559 SIAH2O43255 324 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 HNRNPA2B1P22626 353 aaKnown RBP13.26□□□□□ -0.29
LMNA-201ENST00000347559 TDRG1Q3Y452 100 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 GBGT1Q8N5D6 347 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 A0A1W2PNR3 127 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 A0A1W2PQD3 144 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 BLACEA4D250 179 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 M0QZK8 103 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 GGCTO75223 188 aaKnown RBP13.26□□□□□ -0.29
LMNA-201ENST00000347559 TNFSF10P50591 281 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 FAM3BP58499 235 aaPredicted RBP13.26□□□□□ -0.29
LMNA-201ENST00000347559 ZNF92Q03936 586 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 MYBPHQ13203 477 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 IZUMO4Q1ZYL8 232 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 SHISA6Q6ZSJ9 500 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 ANGPTL4Q9BY76 406 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 OR51I2Q9H344 312 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 PNRC2Q9NPJ4 139 aaKnown RBP13.26□□□□□ -0.29
LMNA-201ENST00000347559 PAM16Q9Y3D7 125 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 TMEM131Q92545 1883 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 KIR2DL5BA0A0G2JN68 375 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 KIR2DL5BA0A0G2JPC4 375 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 ZNF737O75373 536 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 DHRS3O75911 302 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms