RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 C1QL4Q86Z23 238 aa7.48□□□□□ -1.21
CLK1-201ENST00000321356 TMEM252Q8N6L7 170 aa7.48□□□□□ -1.21
CLK1-201ENST00000321356 LILRB1Q8NHL6 650 aaPredicted RBP7.48□□□□□ -1.21
CLK1-201ENST00000321356 TMEM45BQ96B21 275 aa7.48□□□□□ -1.21
CLK1-201ENST00000321356 SIGLEC12Q96PQ1 595 aa7.48□□□□□ -1.21
CLK1-201ENST00000321356 PAPOLGQ9BWT3 736 aaKnown RBP7.48□□□□□ -1.21
CLK1-201ENST00000321356 FGF23Q9GZV9 251 aaPredicted RBP7.48□□□□□ -1.21
CLK1-201ENST00000321356 PLEKHF2Q9H8W4 249 aa7.48□□□□□ -1.21
CLK1-201ENST00000321356 hCG_1809904A0A1W2PP81 198 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 A0A1W2PPE2 198 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 A0A1W2PR64 198 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 A0A1W2PRV1 198 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 PROB1E7EW31 1015 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 YKT6O15498 198 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 TMEM50AO95807 157 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 TK1P04183 234 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 OR8U8P0C7N1 319 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 ZNF14P17017 642 aaPredicted RBP7.47□□□□□ -1.21
CLK1-201ENST00000321356 ASCL1P50553 236 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 GFRA1P56159 465 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 FGF12P61328 243 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 RPS23P62266 143 aaKnown RBP7.47□□□□□ -1.21
CLK1-201ENST00000321356 CCL20P78556 96 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 ID3Q02535 119 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 BAXQ07812 192 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 Q0VFX4 171 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 HERPUD1Q15011 391 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 TSC22D1Q15714 1073 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 CXorf66Q5JRM2 361 aaPredicted RBP7.47□□□□□ -1.21
CLK1-201ENST00000321356 KRBOX4Q5JUW0 171 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 CDCP2Q5VXM1 449 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 ZNF818PQ6ZRF7 136 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 PPP1R32Q7Z5V6 425 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 ZNF695Q8IW36 515 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 FAM24BQ8N5W8 94 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 OR2G3Q8NGZ4 309 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 PLPPR1Q8TBJ4 325 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 CD300LFQ8TDQ1 290 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 RARRES2Q99969 163 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 ZNF251Q9BRH9 671 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 TCEAL7Q9BRU2 100 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 REPIN1Q9BWE0 567 aaKnown RBP7.47□□□□□ -1.21
CLK1-201ENST00000321356 SLC25A31Q9H0C2 315 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 GLRX2Q9NS18 164 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 KIAA1456Q9P272 454 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 TCFL5Q9UL49 500 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 UBE2J1Q9Y385 318 aaPredicted RBP7.47□□□□□ -1.21
CLK1-201ENST00000321356 RFNGQ9Y644 331 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 IGKV3D-15A0A087WSY6 115 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 IGKV1D-13A0A0B4J2D9 117 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 CCDC163A0A0D9SF12 145 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 MED19A0JLT2 244 aaPredicted RBP7.47□□□□□ -1.21
CLK1-201ENST00000321356 RBFOX3A6NFN3 312 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 SLC22A20A6NK97 555 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 LINC01387J3KSC0 135 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 ADAM20O43506 726 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 IGHEP01854 428 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 ARG1P05089 322 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 OR13C7P0DN81 318 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 IGKV1-13P0DP09 117 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 CEACAM1P13688 526 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 BCL3P20749 454 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 VDAC1P21796 283 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 HOXA6P31267 233 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 FABP9Q0Z7S8 132 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 RNPS1Q15287 305 aaKnown RBP7.47□□□□□ -1.21
CLK1-201ENST00000321356 MPV17LQ2QL34 196 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 SOHLH1Q5JUK2 328 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 WIPI1Q5MNZ9 446 aaPredicted RBP7.47□□□□□ -1.21
CLK1-201ENST00000321356 GAPTQ8N292 157 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 SUMF2Q8NBJ7 301 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 SUMF1Q8NBK3 374 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 OR56B2PQ8NGI1 322 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 NANPQ8TBE9 248 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 ABHD3Q8WU67 409 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 IL22RA2Q969J5 263 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 CPNE4Q96A23 557 aaPredicted RBP7.47□□□□□ -1.21
CLK1-201ENST00000321356 HS3ST6Q96QI5 342 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 ABHD14AQ9BUJ0 271 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 DEPPQ9NTK1 212 aa7.47□□□□□ -1.21
CLK1-201ENST00000321356 IGKV1-6A0A0C4DH72 117 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 KIR2DS1A0A191URI9 304 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 CDRT15L2A8MXV6 281 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 H0Y980 276 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 GPR37O15354 613 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 HSPA12AO43301 675 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 SSSCA1O60232 199 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 SS18L1O75177 396 aaPredicted RBP7.46□□□□□ -1.22
CLK1-201ENST00000321356 SLC34A2O95436 690 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 S100A9P06702 114 aaKnown RBP7.46□□□□□ -1.22
CLK1-201ENST00000321356 SCTP09683 121 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 CTXN2P0C2S0 81 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 CBR1P16152 277 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 KIR2DS4P43632 304 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 PRDX4Q13162 271 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 KIR2DS1Q14954 304 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 HEPN1Q6WQI6 88 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 SLC16A13Q7RTY0 426 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 C5orf24Q7Z6I8 188 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 ZNF565Q8N9K5 539 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms