RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 ARPC1BO15143 372 aaKnown RBP5.84□□□□□ -1.47
PTCD2-201ENST00000308077 PSPNO60542 156 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 HAND1O96004 215 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 NAPSAO96009 420 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 H2AFB2P0C5Z0 115 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 TNFSF4P23510 183 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 MEF2DQ14814 521 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 SWI5Q1ZZU3 235 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 FAM201AQ5SY85 155 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 C20orf204Q6ZNR8 217 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 C5orf24Q7Z6I8 188 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 OR13C8Q8NGS7 320 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 PLPPR1Q8TBJ4 325 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 Q8TCH9 128 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 DHRS9Q9BPW9 319 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 GINS4Q9BRT9 223 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 SPACA1Q9HBV2 294 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 C12orf4Q9NQ89 552 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 ROS1P08922 2347 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 PKD1L1Q8TDX9 2849 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 IGKV1D-17A0A075B6S4 117 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 IGHV3OR15-7A0A075B7D8 119 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 RFPL4AA6NLU0 287 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 VSTM5A8MXK1 200 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 B9A039 149 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 RFPL4AL1F8VTS6 287 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 SH2D1BO14796 132 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 TPD52L2O43399 206 aaKnown RBP5.84□□□□□ -1.47
PTCD2-201ENST00000308077 CYB5R3P00387 301 aaPredicted RBP5.84□□□□□ -1.47
PTCD2-201ENST00000308077 KNG1P01042 644 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 GLAP06280 429 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 TBPP20226 339 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 CD80P33681 288 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 NKX2-5P52952 324 aaPredicted RBP5.84□□□□□ -1.47
PTCD2-201ENST00000308077 BTG1P62324 171 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 MRPS15P82914 257 aaKnown RBP5.84□□□□□ -1.47
PTCD2-201ENST00000308077 RBMS2Q15434 407 aaKnown RBP5.84□□□□□ -1.47
PTCD2-201ENST00000308077 SMIM21Q3B7S5 101 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 SCGB2B2Q4G0G5 96 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 PAN3Q58A45 887 aaKnown RBP5.84□□□□□ -1.47
PTCD2-201ENST00000308077 VAX1Q5SQQ9 334 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 IDO2Q6ZQW0 420 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 CD177Q8N6Q3 437 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 BOLLQ8N9W6 283 aaKnown RBP5.84□□□□□ -1.47
PTCD2-201ENST00000308077 OR5AP2Q8NGF4 316 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 OR5T2Q8NGG2 359 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 OR5H2Q8NGV7 314 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 MRPL30Q8TCC3 161 aaKnown RBP5.84□□□□□ -1.47
PTCD2-201ENST00000308077 NEK7Q8TDX7 302 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 ST6GAL2Q96JF0 529 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 DIRC2Q96SL1 478 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 BEX2Q9BXY8 128 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 CHST6Q9GZX3 395 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 PPA2Q9H2U2 334 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 BEX1Q9HBH7 125 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 SLC2A8Q9NY64 477 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 RASL12Q9NYN1 266 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 ANXA10Q9UJ72 324 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 NBEAL2Q6ZNJ1 2754 aa5.84□□□□□ -1.48
PTCD2-201ENST00000308077 DSCAMO60469 2012 aa5.84□□□□□ -1.48
PTCD2-201ENST00000308077 CSPG4Q6UVK1 2322 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 TMEM82A0PJX8 343 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 OR2AT4A6NND4 320 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 DISC1C4P0D8 188 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 SDCBPO00560 298 aaPredicted RBP5.83□□□□□ -1.48
PTCD2-201ENST00000308077 ZNF205O95201 554 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 PSG2P11465 335 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 LMO1P25800 156 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 TAS2R46P59540 309 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 COL10A1Q03692 680 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 ATXN7L3Q14CW9 347 aaPredicted RBP5.83□□□□□ -1.48
PTCD2-201ENST00000308077 ACTBL2Q562R1 376 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 FAM209AQ5JX71 171 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 FIP1L1Q6UN15 594 aaKnown RBP5.83□□□□□ -1.48
PTCD2-201ENST00000308077 C17orf107Q6ZR85 190 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 OVCH2Q7RTZ1 564 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 MUC15Q8N387 334 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 OR6F1Q8NGZ6 308 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 FAM222BQ8WU58 562 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 GIMAP1Q8WWP7 306 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 ERGIC1Q969X5 290 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 TMEM165Q9HC07 324 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 CHMP1AQ9HD42 196 aaPredicted RBP5.83□□□□□ -1.48
PTCD2-201ENST00000308077 Q9N2K0 584 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 DYNLRB1Q9NP97 96 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 ING3Q9NXR8 418 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 EHFQ9NZC4 300 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 RNF7Q9UBF6 113 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 ZNF222Q9UK12 451 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 EDARQ9UNE0 448 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 PPP1R3CQ9UQK1 317 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 VSIG4Q9Y279 399 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 WIPI2Q9Y4P8 454 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 PKDREJQ9NTG1 2253 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 TRBV6-6A0A0A6YYG2 114 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 A0A0A6YYJ9 748 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 C7orf66A4D0T2 115 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 H3BUI4 141 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 PEX14O75381 377 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 GSTT2P0CG29 244 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms