RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 TMEM165Q9HC07 324 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 CHMP1AQ9HD42 196 aaPredicted RBP11.86□□□□□ -0.51
SS18-201ENST00000269137 EHFQ9NZC4 300 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 OR14J1Q9UGF5 321 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 FLNCQ14315 2725 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 RFPL4AA6NLU0 287 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 CEACAM18A8MTB9 384 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 RFPL4AL1F8VTS6 287 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 PRB1P04280 392 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 KCNJ3P48549 501 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 LHFPL1Q86WI0 220 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 ZDHHC22Q8N966 263 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 OR11L1Q8NGX0 322 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 MRPL30Q8TCC3 161 aaKnown RBP11.86□□□□□ -0.51
SS18-201ENST00000269137 GIMAP1Q8WWP7 306 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 MRGPRFQ96AM1 343 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 MYOZ1Q9NP98 299 aaPredicted RBP11.86□□□□□ -0.51
SS18-201ENST00000269137 PPP1R3CQ9UQK1 317 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 WIPI2Q9Y4P8 454 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 DYSFO75923 2080 aa11.85□□□□□ -0.51
SS18-201ENST00000269137 OR2AT4A6NND4 320 aa11.85□□□□□ -0.51
SS18-201ENST00000269137 A8MV72 311 aaPredicted RBP11.85□□□□□ -0.51
SS18-201ENST00000269137 PSG2P11465 335 aa11.85□□□□□ -0.51
SS18-201ENST00000269137 IGFBP2P18065 325 aa11.85□□□□□ -0.51
SS18-201ENST00000269137 TSPAN5P62079 268 aa11.85□□□□□ -0.51
SS18-201ENST00000269137 CCL8P80075 99 aa11.85□□□□□ -0.51
SS18-201ENST00000269137 HOXA4Q00056 320 aaPredicted RBP11.85□□□□□ -0.51
SS18-201ENST00000269137 ZFP69Q49AA0 526 aa11.85□□□□□ -0.51
SS18-201ENST00000269137 METTL11BQ5VVY1 283 aa11.85□□□□□ -0.51
SS18-201ENST00000269137 ZNF497Q6ZNH5 498 aa11.85□□□□□ -0.51
SS18-201ENST00000269137 SLC36A1Q7Z2H8 476 aa11.85□□□□□ -0.51
SS18-201ENST00000269137 MUC15Q8N387 334 aa11.85□□□□□ -0.51
SS18-201ENST00000269137 DYNLRB1Q9NP97 96 aa11.85□□□□□ -0.51
SS18-201ENST00000269137 NECAP2Q9NVZ3 263 aa11.85□□□□□ -0.51
SS18-201ENST00000269137 USP9XQ93008 2570 aaPredicted RBP11.84□□□□□ -0.51
SS18-201ENST00000269137 KIR2DS1A0A191URI9 304 aa11.84□□□□□ -0.51
SS18-201ENST00000269137 TMEM82A0PJX8 343 aa11.84□□□□□ -0.51
SS18-201ENST00000269137 SDCBPO00560 298 aaPredicted RBP11.84□□□□□ -0.51
SS18-201ENST00000269137 PSPNO60542 156 aa11.84□□□□□ -0.51
SS18-201ENST00000269137 C1QL1O75973 258 aa11.84□□□□□ -0.51
SS18-201ENST00000269137 RLN1P04808 185 aa11.84□□□□□ -0.51
SS18-201ENST00000269137 OR5H8P0DN80 308 aa11.84□□□□□ -0.51
SS18-201ENST00000269137 ANXA7P20073 488 aaKnown RBP11.84□□□□□ -0.51
SS18-201ENST00000269137 PRDX2P32119 198 aa11.84□□□□□ -0.51
SS18-201ENST00000269137 KIR2DS4P43632 304 aa11.84□□□□□ -0.51
SS18-201ENST00000269137 CEBPDP49716 269 aaPredicted RBP11.84□□□□□ -0.51
SS18-201ENST00000269137 KIR2DS1Q14954 304 aa11.84□□□□□ -0.51
SS18-201ENST00000269137 ATPAF1Q5TC12 328 aaPredicted RBP11.84□□□□□ -0.51
SS18-201ENST00000269137 ZNF660Q6AZW8 331 aaPredicted RBP11.84□□□□□ -0.51
SS18-201ENST00000269137 DHRS11Q6UWP2 260 aa11.84□□□□□ -0.51
SS18-201ENST00000269137 GLDNQ6ZMI3 551 aaPredicted RBP11.84□□□□□ -0.51
SS18-201ENST00000269137 MOB1BQ7L9L4 216 aa11.84□□□□□ -0.51
SS18-201ENST00000269137 OR51J1Q9H342 316 aa11.84□□□□□ -0.51
SS18-201ENST00000269137 RANGRFQ9HD47 186 aaPredicted RBP11.84□□□□□ -0.51
SS18-201ENST00000269137 DECR2Q9NUI1 292 aa11.84□□□□□ -0.51
SS18-201ENST00000269137 DNAJB11Q9UBS4 358 aa11.84□□□□□ -0.51
SS18-201ENST00000269137 SPTAN1Q13813 2472 aaKnown RBP11.84□□□□□ -0.51
SS18-201ENST00000269137 IGKV1D-17A0A075B6S4 117 aa11.83□□□□□ -0.51
SS18-201ENST00000269137 TRDCB7Z8K6 153 aa11.83□□□□□ -0.51
SS18-201ENST00000269137 IRF2P14316 349 aa11.83□□□□□ -0.51
SS18-201ENST00000269137 PAX5Q02548 391 aa11.83□□□□□ -0.51
SS18-201ENST00000269137 C20orf204Q6ZNR8 217 aa11.83□□□□□ -0.51
SS18-201ENST00000269137 ZCCHC24Q8N2G6 241 aaKnown RBP11.83□□□□□ -0.51
SS18-201ENST00000269137 CD177Q8N6Q3 437 aa11.83□□□□□ -0.51
SS18-201ENST00000269137 PLPPR1Q8TBJ4 325 aa11.83□□□□□ -0.51
SS18-201ENST00000269137 DMRTB1Q96MA1 342 aa11.83□□□□□ -0.51
SS18-201ENST00000269137 FAM210AQ96ND0 272 aa11.83□□□□□ -0.51
SS18-201ENST00000269137 SCGB3A2Q96PL1 93 aa11.83□□□□□ -0.51
SS18-201ENST00000269137 BEX2Q9BXY8 128 aa11.83□□□□□ -0.51
SS18-201ENST00000269137 SAP30LQ9HAJ7 183 aa11.83□□□□□ -0.51
SS18-201ENST00000269137 BEX1Q9HBH7 125 aa11.83□□□□□ -0.51
SS18-201ENST00000269137 MGAT4AQ9UM21 535 aa11.83□□□□□ -0.51
SS18-201ENST00000269137 VSIG4Q9Y279 399 aa11.83□□□□□ -0.51
SS18-201ENST00000269137 LRRC30A6NM36 301 aa11.83□□□□□ -0.52
SS18-201ENST00000269137 SNRPGP15A8MWD9 76 aa11.83□□□□□ -0.52
SS18-201ENST00000269137 ZNF737O75373 536 aa11.83□□□□□ -0.52
SS18-201ENST00000269137 GSTT2P0CG29 244 aa11.83□□□□□ -0.52
SS18-201ENST00000269137 VSIG10L2P0DP72 767 aa11.83□□□□□ -0.52
SS18-201ENST00000269137 RRAS2P62070 204 aaPredicted RBP11.83□□□□□ -0.52
SS18-201ENST00000269137 SNRPD2P62316 118 aaKnown RBP11.83□□□□□ -0.52
SS18-201ENST00000269137 COL10A1Q03692 680 aa11.83□□□□□ -0.52
SS18-201ENST00000269137 AADACL3Q5VUY0 350 aa11.83□□□□□ -0.52
SS18-201ENST00000269137 C17orf107Q6ZR85 190 aa11.83□□□□□ -0.52
SS18-201ENST00000269137 BOLLQ8N9W6 283 aaKnown RBP11.83□□□□□ -0.52
SS18-201ENST00000269137 CCDC107Q8WV48 283 aa11.83□□□□□ -0.52
SS18-201ENST00000269137 GPN1Q9HCN4 374 aaPredicted RBP11.83□□□□□ -0.52
SS18-201ENST00000269137 ZNF222Q9UK12 451 aa11.83□□□□□ -0.52
SS18-201ENST00000269137 FBXO9Q9UK97 447 aaPredicted RBP11.83□□□□□ -0.52
SS18-201ENST00000269137 TMEM30CPA0ZSE6 113 aa11.82□□□□□ -0.52
SS18-201ENST00000269137 C19orf84I3L1E1 186 aa11.82□□□□□ -0.52
SS18-201ENST00000269137 FABP7O15540 132 aa11.82□□□□□ -0.52
SS18-201ENST00000269137 HPXP02790 462 aa11.82□□□□□ -0.52
SS18-201ENST00000269137 CTXN2P0C2S0 81 aa11.82□□□□□ -0.52
SS18-201ENST00000269137 MUC1P15941 1255 aaPredicted RBP11.82□□□□□ -0.52
SS18-201ENST00000269137 ECI1P42126 302 aa11.82□□□□□ -0.52
SS18-201ENST00000269137 OR3A1P47881 315 aa11.82□□□□□ -0.52
SS18-201ENST00000269137 CD83Q01151 205 aa11.82□□□□□ -0.52
SS18-201ENST00000269137 IFITM2Q01629 132 aa11.82□□□□□ -0.52
SS18-201ENST00000269137 SURF2Q15527 256 aaPredicted RBP11.82□□□□□ -0.52
SS18-201ENST00000269137 TEX36Q5VZQ5 186 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms