RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 NBPF9Q3BBW0 867 aa13.24□□□□□ -0.29
LITAF-216ENST00000574848 DLK2Q6UY11 383 aa13.24□□□□□ -0.29
LITAF-216ENST00000574848 MTMR14Q8NCE2 650 aa13.24□□□□□ -0.29
LITAF-216ENST00000574848 FBXW7Q969H0 707 aa13.24□□□□□ -0.29
LITAF-216ENST00000574848 PRDM10Q9NQV6 1147 aa13.24□□□□□ -0.29
LITAF-216ENST00000574848 HDAC9Q9UKV0 1011 aa13.24□□□□□ -0.29
LITAF-216ENST00000574848 CTCFP49711 727 aaPredicted RBP13.23□□□□□ -0.29
LITAF-216ENST00000574848 HUNKP57058 714 aa13.23□□□□□ -0.29
LITAF-216ENST00000574848 FKBP1BP68106 108 aa13.23□□□□□ -0.29
LITAF-216ENST00000574848 LRRC24Q50LG9 513 aa13.23□□□□□ -0.29
LITAF-216ENST00000574848 KIAA0825Q8IV33 1275 aa13.23□□□□□ -0.29
LITAF-216ENST00000574848 TDRD7Q8NHU6 1098 aaKnown RBP13.23□□□□□ -0.29
LITAF-216ENST00000574848 AIDAQ96BJ3 306 aa13.23□□□□□ -0.29
LITAF-216ENST00000574848 SASH1O94885 1247 aa13.22□□□□□ -0.29
LITAF-216ENST00000574848 PDE8BO95263 885 aa13.22□□□□□ -0.29
LITAF-216ENST00000574848 UBTFL1P0CB47 393 aaPredicted RBP13.22□□□□□ -0.29
LITAF-216ENST00000574848 INTS3Q68E01 1043 aaKnown RBP13.22□□□□□ -0.29
LITAF-216ENST00000574848 PAXIP1Q6ZW49 1069 aaPredicted RBP13.22□□□□□ -0.29
LITAF-216ENST00000574848 C2orf69Q8N8R5 385 aa13.22□□□□□ -0.29
LITAF-216ENST00000574848 FAM84BQ96KN1 310 aaPredicted RBP13.22□□□□□ -0.29
LITAF-216ENST00000574848 FBXO3Q9UK99 471 aa13.22□□□□□ -0.29
LITAF-216ENST00000574848 MYH13Q9UKX3 1938 aa13.21□□□□□ -0.29
LITAF-216ENST00000574848 FAM155AB1AL88 458 aaPredicted RBP13.21□□□□□ -0.29
LITAF-216ENST00000574848 PLIN1O60240 522 aa13.21□□□□□ -0.29
LITAF-216ENST00000574848 HSPA8P11142 646 aaKnown RBP13.21□□□□□ -0.29
LITAF-216ENST00000574848 FGFR2P21802 821 aa13.21□□□□□ -0.29
LITAF-216ENST00000574848 HIBADHP31937 336 aaKnown RBP13.21□□□□□ -0.29
LITAF-216ENST00000574848 PTPN12Q05209 780 aaKnown RBP13.21□□□□□ -0.29
LITAF-216ENST00000574848 NOGQ13253 232 aa13.21□□□□□ -0.29
LITAF-216ENST00000574848 METTL24Q5JXM2 366 aa13.21□□□□□ -0.29
LITAF-216ENST00000574848 RGMBQ6NW40 437 aa13.21□□□□□ -0.29
LITAF-216ENST00000574848 FBXO33Q7Z6M2 555 aa13.21□□□□□ -0.29
LITAF-216ENST00000574848 APOBEC3FQ8IUX4 373 aaKnown RBP13.21□□□□□ -0.29
LITAF-216ENST00000574848 HDAC5Q9UQL6 1122 aa13.21□□□□□ -0.29
LITAF-216ENST00000574848 LAMB1P07942 1786 aa13.21□□□□□ -0.29
LITAF-216ENST00000574848 EYA2O00167 538 aa13.2□□□□□ -0.3
LITAF-216ENST00000574848 CA12O43570 354 aa13.2□□□□□ -0.3
LITAF-216ENST00000574848 AOC2O75106 756 aa13.2□□□□□ -0.3
LITAF-216ENST00000574848 CIAO1O76071 339 aa13.2□□□□□ -0.3
LITAF-216ENST00000574848 GYG1P46976 350 aa13.2□□□□□ -0.3
LITAF-216ENST00000574848 PUM3Q15397 648 aaKnown RBP13.2□□□□□ -0.3
LITAF-216ENST00000574848 KLHDC4Q8TBB5 520 aa13.2□□□□□ -0.3
LITAF-216ENST00000574848 SPDYE2BA6NHP3 402 aa13.19□□□□□ -0.3
LITAF-216ENST00000574848 SLC10A3P09131 477 aa13.19□□□□□ -0.3
LITAF-216ENST00000574848 SPDYE6P0CI01 402 aa13.19□□□□□ -0.3
LITAF-216ENST00000574848 TRIM27P14373 513 aa13.19□□□□□ -0.3
LITAF-216ENST00000574848 MTX1Q13505 466 aa13.19□□□□□ -0.3
LITAF-216ENST00000574848 ATG9AQ7Z3C6 839 aa13.19□□□□□ -0.3
LITAF-216ENST00000574848 CCDC102AQ96A19 550 aa13.19□□□□□ -0.3
LITAF-216ENST00000574848 MEIS3Q99687 375 aa13.19□□□□□ -0.3
LITAF-216ENST00000574848 SSC5DA1L4H1 1573 aa13.19□□□□□ -0.3
LITAF-216ENST00000574848 ZBTB22O15209 634 aa13.18□□□□□ -0.3
LITAF-216ENST00000574848 IPO8O15397 1037 aaKnown RBP13.18□□□□□ -0.3
LITAF-216ENST00000574848 GRM1Q13255 1194 aa13.18□□□□□ -0.3
LITAF-216ENST00000574848 DLGAP5Q15398 846 aa13.18□□□□□ -0.3
LITAF-216ENST00000574848 MFSD14BQ5SR56 506 aa13.18□□□□□ -0.3
LITAF-216ENST00000574848 ATF7IPQ6VMQ6 1270 aa13.18□□□□□ -0.3
LITAF-216ENST00000574848 TNS4Q8IZW8 715 aa13.18□□□□□ -0.3
LITAF-216ENST00000574848 SERPINA10Q9UK55 444 aa13.18□□□□□ -0.3
LITAF-216ENST00000574848 PPP2R3BQ9Y5P8 575 aa13.18□□□□□ -0.3
LITAF-216ENST00000574848 LRRFIP2Q9Y608 721 aaKnown RBP13.18□□□□□ -0.3
LITAF-216ENST00000574848 GNAI3P08754 354 aa13.17□□□□□ -0.3
LITAF-216ENST00000574848 LBX1P52954 281 aa13.17□□□□□ -0.3
LITAF-216ENST00000574848 CFAP100Q494V2 611 aa13.17□□□□□ -0.3
LITAF-216ENST00000574848 CAVIN4Q5BKX8 364 aa13.17□□□□□ -0.3
LITAF-216ENST00000574848 RASAL3Q86YV0 1011 aa13.17□□□□□ -0.3
LITAF-216ENST00000574848 TBC1D22AQ8WUA7 517 aa13.17□□□□□ -0.3
LITAF-216ENST00000574848 LPIN2Q92539 896 aa13.17□□□□□ -0.3
LITAF-216ENST00000574848 CCDC136Q96JN2 1154 aa13.17□□□□□ -0.3
LITAF-216ENST00000574848 BEGAINQ9BUH8 593 aa13.17□□□□□ -0.3
LITAF-216ENST00000574848 COPRSQ9NQ92 184 aa13.17□□□□□ -0.3
LITAF-216ENST00000574848 JAG2Q9Y219 1238 aa13.17□□□□□ -0.3
LITAF-216ENST00000574848 BCAR3O75815 825 aa13.16□□□□□ -0.3
LITAF-216ENST00000574848 IFIT1P09914 478 aaKnown RBP13.16□□□□□ -0.3
LITAF-216ENST00000574848 ZNF157P51786 506 aaPredicted RBP13.16□□□□□ -0.3
LITAF-216ENST00000574848 ZIC5Q96T25 663 aa13.16□□□□□ -0.3
LITAF-216ENST00000574848 SAGE1Q9NXZ1 904 aa13.16□□□□□ -0.3
LITAF-216ENST00000574848 SCAF8Q9UPN6 1271 aaKnown RBP13.16□□□□□ -0.3
LITAF-216ENST00000574848 PCDHAC2Q9Y5I4 1007 aa13.16□□□□□ -0.3
LITAF-216ENST00000574848 AOX1Q06278 1338 aa13.15□□□□□ -0.3
LITAF-216ENST00000574848 F8W031 263 aaPredicted RBP13.15□□□□□ -0.3
LITAF-216ENST00000574848 MYO1BO43795 1136 aa13.15□□□□□ -0.3
LITAF-216ENST00000574848 SLC5A1P13866 664 aa13.15□□□□□ -0.3
LITAF-216ENST00000574848 NF2P35240 595 aa13.15□□□□□ -0.3
LITAF-216ENST00000574848 IL15P40933 162 aaPredicted RBP13.15□□□□□ -0.3
LITAF-216ENST00000574848 HDLBPQ00341 1268 aaKnown RBP13.15□□□□□ -0.3
LITAF-216ENST00000574848 SPDYE2Q495Y8 402 aa13.15□□□□□ -0.3
LITAF-216ENST00000574848 VPS37DQ86XT2 251 aa13.15□□□□□ -0.3
LITAF-216ENST00000574848 PRMT6Q96LA8 375 aaPredicted RBP13.15□□□□□ -0.3
LITAF-216ENST00000574848 DEFB129Q9H1M3 183 aa13.15□□□□□ -0.3
LITAF-216ENST00000574848 TTF2Q9UNY4 1162 aaKnown RBP13.15□□□□□ -0.3
LITAF-216ENST00000574848 SUGT1Q9Y2Z0 365 aa13.15□□□□□ -0.3
LITAF-216ENST00000574848 AKAP11Q9UKA4 1901 aa13.15□□□□□ -0.3
LITAF-216ENST00000574848 OTOFQ9HC10 1997 aa13.14□□□□□ -0.31
LITAF-216ENST00000574848 BCAMP50895 628 aa13.14□□□□□ -0.31
LITAF-216ENST00000574848 MAP3K11Q16584 847 aa13.14□□□□□ -0.31
LITAF-216ENST00000574848 PRAMEF18Q5VWM3 479 aa13.14□□□□□ -0.31
LITAF-216ENST00000574848 REM2Q8IYK8 340 aaPredicted RBP13.14□□□□□ -0.31
LITAF-216ENST00000574848 TNNQ9UQP3 1299 aa13.14□□□□□ -0.31
LITAF-216ENST00000574848 KIF23Q02241 960 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms