RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 FGFR2P21802 821 aa12.93□□□□□ -0.34
SHMT2-224ENST00000556737 FKBP1AP62942 108 aaKnown RBP12.93□□□□□ -0.34
SHMT2-224ENST00000556737 ATF7IPQ6VMQ6 1270 aa12.93□□□□□ -0.34
SHMT2-224ENST00000556737 ATG9AQ7Z3C6 839 aa12.93□□□□□ -0.34
SHMT2-224ENST00000556737 SULF1Q8IWU6 871 aa12.93□□□□□ -0.34
SHMT2-224ENST00000556737 HHIPL1Q96JK4 782 aa12.93□□□□□ -0.34
SHMT2-224ENST00000556737 CAPNS2Q96L46 248 aa12.93□□□□□ -0.34
SHMT2-224ENST00000556737 JAG2Q9Y219 1238 aa12.93□□□□□ -0.34
SHMT2-224ENST00000556737 HIBADHP31937 336 aaKnown RBP12.92□□□□□ -0.34
SHMT2-224ENST00000556737 MMP14P50281 582 aa12.92□□□□□ -0.34
SHMT2-224ENST00000556737 FBXO33Q7Z6M2 555 aa12.92□□□□□ -0.34
SHMT2-224ENST00000556737 OGFOD1Q8N543 542 aa12.92□□□□□ -0.34
SHMT2-224ENST00000556737 FRAT1Q92837 279 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-224ENST00000556737 GBA2Q9HCG7 927 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-224ENST00000556737 SCAF8Q9UPN6 1271 aaKnown RBP12.92□□□□□ -0.34
SHMT2-224ENST00000556737 PCDHAC2Q9Y5I4 1007 aa12.92□□□□□ -0.34
SHMT2-224ENST00000556737 AOX1Q06278 1338 aa12.91□□□□□ -0.34
SHMT2-224ENST00000556737 SSC5DA1L4H1 1573 aa12.91□□□□□ -0.34
SHMT2-224ENST00000556737 FOXN1O15353 648 aa12.91□□□□□ -0.34
SHMT2-224ENST00000556737 IPO8O15397 1037 aaKnown RBP12.91□□□□□ -0.34
SHMT2-224ENST00000556737 CIAO1O76071 339 aa12.91□□□□□ -0.34
SHMT2-224ENST00000556737 MTX1Q13505 466 aa12.91□□□□□ -0.34
SHMT2-224ENST00000556737 PUM3Q15397 648 aaKnown RBP12.91□□□□□ -0.34
SHMT2-224ENST00000556737 MTMR14Q8NCE2 650 aa12.91□□□□□ -0.34
SHMT2-224ENST00000556737 WBP1LQ9NX94 342 aa12.91□□□□□ -0.34
SHMT2-224ENST00000556737 AOC2O75106 756 aa12.9□□□□□ -0.34
SHMT2-224ENST00000556737 GNAI3P08754 354 aa12.9□□□□□ -0.34
SHMT2-224ENST00000556737 ECE1P42892 770 aa12.9□□□□□ -0.34
SHMT2-224ENST00000556737 HUNKP57058 714 aa12.9□□□□□ -0.34
SHMT2-224ENST00000556737 COL13A1Q5TAT6 717 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-224ENST00000556737 PAXIP1Q6ZW49 1069 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-224ENST00000556737 TMEM57Q8N5G2 664 aa12.9□□□□□ -0.34
SHMT2-224ENST00000556737 CLUAP1Q96AJ1 413 aa12.9□□□□□ -0.34
SHMT2-224ENST00000556737 SIL1Q9H173 461 aa12.9□□□□□ -0.34
SHMT2-224ENST00000556737 FBXO3Q9UK99 471 aa12.9□□□□□ -0.34
SHMT2-224ENST00000556737 HDAC9Q9UKV0 1011 aa12.9□□□□□ -0.34
SHMT2-224ENST00000556737 PA2G4Q9UQ80 394 aaKnown RBP12.9□□□□□ -0.34
SHMT2-224ENST00000556737 SPDYE2BA6NHP3 402 aa12.89□□□□□ -0.35
SHMT2-224ENST00000556737 FAM155AB1AL88 458 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-224ENST00000556737 F8W031 263 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-224ENST00000556737 CENPBP07199 599 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-224ENST00000556737 SPDYE6P0CI01 402 aa12.89□□□□□ -0.35
SHMT2-224ENST00000556737 BCAMP50895 628 aa12.89□□□□□ -0.35
SHMT2-224ENST00000556737 GRM1Q13255 1194 aa12.89□□□□□ -0.35
SHMT2-224ENST00000556737 GRIK5Q16478 980 aa12.89□□□□□ -0.35
SHMT2-224ENST00000556737 MFSD14BQ5SR56 506 aa12.89□□□□□ -0.35
SHMT2-224ENST00000556737 ZKSCAN2Q63HK3 967 aa12.89□□□□□ -0.35
SHMT2-224ENST00000556737 COPRSQ9NQ92 184 aa12.89□□□□□ -0.35
SHMT2-224ENST00000556737 IQSEC3Q9UPP2 1182 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-224ENST00000556737 LAMB1P07942 1786 aa12.89□□□□□ -0.35
SHMT2-224ENST00000556737 CFAP100Q494V2 611 aa12.88□□□□□ -0.35
SHMT2-224ENST00000556737 PRAMEF18Q5VWM3 479 aa12.88□□□□□ -0.35
SHMT2-224ENST00000556737 APOBEC3FQ8IUX4 373 aaKnown RBP12.88□□□□□ -0.35
SHMT2-224ENST00000556737 LPIN2Q92539 896 aa12.88□□□□□ -0.35
SHMT2-224ENST00000556737 HDAC5Q9UQL6 1122 aa12.88□□□□□ -0.35
SHMT2-224ENST00000556737 OTOFQ9HC10 1997 aa12.88□□□□□ -0.35
SHMT2-224ENST00000556737 IFIT1P09914 478 aaKnown RBP12.87□□□□□ -0.35
SHMT2-224ENST00000556737 RLBP1P12271 317 aa12.87□□□□□ -0.35
SHMT2-224ENST00000556737 SLC5A1P13866 664 aa12.87□□□□□ -0.35
SHMT2-224ENST00000556737 IL15P40933 162 aaPredicted RBP12.87□□□□□ -0.35
SHMT2-224ENST00000556737 MAP2K1Q02750 393 aaPredicted RBP12.87□□□□□ -0.35
SHMT2-224ENST00000556737 DLGAP5Q15398 846 aa12.87□□□□□ -0.35
SHMT2-224ENST00000556737 CAVIN4Q5BKX8 364 aa12.87□□□□□ -0.35
SHMT2-224ENST00000556737 C2orf69Q8N8R5 385 aa12.87□□□□□ -0.35
SHMT2-224ENST00000556737 PRMT6Q96LA8 375 aaPredicted RBP12.87□□□□□ -0.35
SHMT2-224ENST00000556737 ZIC5Q96T25 663 aa12.87□□□□□ -0.35
SHMT2-224ENST00000556737 PNMA6EA0A0J9YXQ4 647 aa12.86□□□□□ -0.35
SHMT2-224ENST00000556737 SRGAP3O43295 1099 aa12.86□□□□□ -0.35
SHMT2-224ENST00000556737 GNAI2P04899 355 aa12.86□□□□□ -0.35
SHMT2-224ENST00000556737 SLC10A3P09131 477 aa12.86□□□□□ -0.35
SHMT2-224ENST00000556737 HSPA8P11142 646 aaKnown RBP12.86□□□□□ -0.35
SHMT2-224ENST00000556737 MAP2K2P36507 400 aa12.86□□□□□ -0.35
SHMT2-224ENST00000556737 FKBP1BP68106 108 aa12.86□□□□□ -0.35
SHMT2-224ENST00000556737 CHAF1AQ13111 956 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-224ENST00000556737 ATP2B3Q16720 1220 aa12.86□□□□□ -0.35
SHMT2-224ENST00000556737 RGMBQ6NW40 437 aa12.86□□□□□ -0.35
SHMT2-224ENST00000556737 MOB2Q70IA6 237 aa12.86□□□□□ -0.35
SHMT2-224ENST00000556737 VPS37DQ86XT2 251 aa12.86□□□□□ -0.35
SHMT2-224ENST00000556737 TTF2Q9UNY4 1162 aaKnown RBP12.86□□□□□ -0.35
SHMT2-224ENST00000556737 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-224ENST00000556737 CLRN2A0PK11 232 aa12.85□□□□□ -0.35
SHMT2-224ENST00000556737 NOGQ13253 232 aa12.85□□□□□ -0.35
SHMT2-224ENST00000556737 RASAL3Q86YV0 1011 aa12.85□□□□□ -0.35
SHMT2-224ENST00000556737 TBC1D22AQ8WUA7 517 aa12.85□□□□□ -0.35
SHMT2-224ENST00000556737 AIDAQ96BJ3 306 aa12.85□□□□□ -0.35
SHMT2-224ENST00000556737 CEP126Q9P2H0 1117 aa12.85□□□□□ -0.35
SHMT2-224ENST00000556737 SERPINA10Q9UK55 444 aa12.85□□□□□ -0.35
SHMT2-224ENST00000556737 ZBTB22O15209 634 aa12.84□□□□□ -0.35
SHMT2-224ENST00000556737 ADORA1P30542 326 aa12.84□□□□□ -0.35
SHMT2-224ENST00000556737 CRKP46108 304 aa12.84□□□□□ -0.35
SHMT2-224ENST00000556737 CTCFP49711 727 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-224ENST00000556737 SPDYE2Q495Y8 402 aa12.84□□□□□ -0.35
SHMT2-224ENST00000556737 DZIP1LQ8IYY4 767 aaKnown RBP12.84□□□□□ -0.35
SHMT2-224ENST00000556737 DEFB129Q9H1M3 183 aa12.84□□□□□ -0.35
SHMT2-224ENST00000556737 PPP2R3BQ9Y5P8 575 aa12.84□□□□□ -0.35
SHMT2-224ENST00000556737 PHKA1P46020 1223 aa12.83□□□□□ -0.36
SHMT2-224ENST00000556737 ZNF157P51786 506 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-224ENST00000556737 FTSJ3Q8IY81 847 aaKnown RBP12.83□□□□□ -0.36
SHMT2-224ENST00000556737 PRDM10Q9NQV6 1147 aa12.83□□□□□ -0.36
SHMT2-224ENST00000556737 UBE2Q2LH0YL09 131 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms