RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 METTL24Q5JXM2 366 aa12□□□□□ -0.49
CHD7-208ENST00000528280 INTS3Q68E01 1043 aaKnown RBP12□□□□□ -0.49
CHD7-208ENST00000528280 VPS37DQ86XT2 251 aa12□□□□□ -0.49
CHD7-208ENST00000528280 ANKRD44Q8N8A2 993 aa12□□□□□ -0.49
CHD7-208ENST00000528280 CCDC102AQ96A19 550 aa12□□□□□ -0.49
CHD7-208ENST00000528280 GGA3Q9NZ52 723 aa12□□□□□ -0.49
CHD7-208ENST00000528280 MYO1BO43795 1136 aa11.99□□□□□ -0.49
CHD7-208ENST00000528280 IFIT1P09914 478 aaKnown RBP11.99□□□□□ -0.49
CHD7-208ENST00000528280 DLGAP5Q15398 846 aa11.99□□□□□ -0.49
CHD7-208ENST00000528280 ANGEL2Q5VTE6 544 aaKnown RBP11.99□□□□□ -0.49
CHD7-208ENST00000528280 MTMR14Q8NCE2 650 aa11.99□□□□□ -0.49
CHD7-208ENST00000528280 TDRD7Q8NHU6 1098 aaKnown RBP11.99□□□□□ -0.49
CHD7-208ENST00000528280 GBA2Q9HCG7 927 aaPredicted RBP11.99□□□□□ -0.49
CHD7-208ENST00000528280 IRS2Q9Y4H2 1338 aa11.99□□□□□ -0.49
CHD7-208ENST00000528280 AKAP11Q9UKA4 1901 aa11.99□□□□□ -0.49
CHD7-208ENST00000528280 SCN9AQ15858 1988 aa11.98□□□□□ -0.49
CHD7-208ENST00000528280 FAM205AQ6ZU69 1335 aa11.98□□□□□ -0.49
CHD7-208ENST00000528280 EYA2O00167 538 aa11.98□□□□□ -0.49
CHD7-208ENST00000528280 WNT10BO00744 389 aa11.98□□□□□ -0.49
CHD7-208ENST00000528280 FRAT2O75474 233 aaPredicted RBP11.98□□□□□ -0.49
CHD7-208ENST00000528280 KLRK1P26718 216 aa11.98□□□□□ -0.49
CHD7-208ENST00000528280 NF2P35240 595 aa11.98□□□□□ -0.49
CHD7-208ENST00000528280 HUNKP57058 714 aa11.98□□□□□ -0.49
CHD7-208ENST00000528280 FBXO33Q7Z6M2 555 aa11.98□□□□□ -0.49
CHD7-208ENST00000528280 APOBEC3FQ8IUX4 373 aaKnown RBP11.98□□□□□ -0.49
CHD7-208ENST00000528280 KIAA0825Q8IV33 1275 aa11.98□□□□□ -0.49
CHD7-208ENST00000528280 REM2Q8IYK8 340 aaPredicted RBP11.98□□□□□ -0.49
CHD7-208ENST00000528280 TBC1D22AQ8WUA7 517 aa11.98□□□□□ -0.49
CHD7-208ENST00000528280 FAM84BQ96KN1 310 aaPredicted RBP11.98□□□□□ -0.49
CHD7-208ENST00000528280 PUS3Q9BZE2 481 aaKnown RBP11.98□□□□□ -0.49
CHD7-208ENST00000528280 PSME4Q14997 1843 aa11.97□□□□□ -0.49
CHD7-208ENST00000528280 SPEF2Q9C093 1822 aa11.97□□□□□ -0.49
CHD7-208ENST00000528280 SNAP23O00161 211 aa11.97□□□□□ -0.49
CHD7-208ENST00000528280 CIAO1O76071 339 aa11.97□□□□□ -0.49
CHD7-208ENST00000528280 NOGQ13253 232 aa11.97□□□□□ -0.49
CHD7-208ENST00000528280 PUM3Q15397 648 aaKnown RBP11.97□□□□□ -0.49
CHD7-208ENST00000528280 NBPF9Q3BBW0 867 aa11.97□□□□□ -0.49
CHD7-208ENST00000528280 LRRC24Q50LG9 513 aa11.97□□□□□ -0.49
CHD7-208ENST00000528280 RGMBQ6NW40 437 aa11.97□□□□□ -0.49
CHD7-208ENST00000528280 ATF7IPQ6VMQ6 1270 aa11.97□□□□□ -0.49
CHD7-208ENST00000528280 GCC1Q96CN9 775 aa11.97□□□□□ -0.49
CHD7-208ENST00000528280 CDCA5Q96FF9 252 aa11.97□□□□□ -0.49
CHD7-208ENST00000528280 MXD3Q9BW11 206 aa11.97□□□□□ -0.49
CHD7-208ENST00000528280 CEP126Q9P2H0 1117 aa11.97□□□□□ -0.49
CHD7-208ENST00000528280 ADM5C9JUS6 153 aa11.96□□□□□ -0.49
CHD7-208ENST00000528280 GYG1P46976 350 aa11.96□□□□□ -0.49
CHD7-208ENST00000528280 PTPN12Q05209 780 aaKnown RBP11.96□□□□□ -0.49
CHD7-208ENST00000528280 ZKSCAN2Q63HK3 967 aa11.96□□□□□ -0.49
CHD7-208ENST00000528280 LPIN2Q92539 896 aa11.96□□□□□ -0.49
CHD7-208ENST00000528280 FRAT1Q92837 279 aaPredicted RBP11.96□□□□□ -0.49
CHD7-208ENST00000528280 MRIQ9BWK5 157 aa11.96□□□□□ -0.49
CHD7-208ENST00000528280 POLR2AP24928 1970 aaKnown RBP11.96□□□□□ -0.5
CHD7-208ENST00000528280 SLC5A1P13866 664 aa11.95□□□□□ -0.5
CHD7-208ENST00000528280 IL15P40933 162 aaPredicted RBP11.95□□□□□ -0.5
CHD7-208ENST00000528280 RFX5P48382 616 aaPredicted RBP11.95□□□□□ -0.5
CHD7-208ENST00000528280 ZNF157P51786 506 aaPredicted RBP11.95□□□□□ -0.5
CHD7-208ENST00000528280 ZBED3Q96IU2 234 aaPredicted RBP11.95□□□□□ -0.5
CHD7-208ENST00000528280 GNL3LQ9NVN8 582 aaKnown RBP11.95□□□□□ -0.5
CHD7-208ENST00000528280 SERPINA10Q9UK55 444 aa11.95□□□□□ -0.5
CHD7-208ENST00000528280 SUGT1Q9Y2Z0 365 aa11.95□□□□□ -0.5
CHD7-208ENST00000528280 PPP2R3BQ9Y5P8 575 aa11.95□□□□□ -0.5
CHD7-208ENST00000528280 ASTN2O75129 1339 aaPredicted RBP11.94□□□□□ -0.5
CHD7-208ENST00000528280 ZBED9Q6R2W3 1325 aa11.94□□□□□ -0.5
CHD7-208ENST00000528280 BCAR3O75815 825 aa11.94□□□□□ -0.5
CHD7-208ENST00000528280 GNAI2P04899 355 aa11.94□□□□□ -0.5
CHD7-208ENST00000528280 RBM5P52756 815 aaKnown RBP eCLIP11.94□□□□□ -0.5
CHD7-208ENST00000528280 HDLBPQ00341 1268 aaKnown RBP11.94□□□□□ -0.5
CHD7-208ENST00000528280 SUPT20HL1Q3ZLR7 823 aa11.94□□□□□ -0.5
CHD7-208ENST00000528280 MFSD14BQ5SR56 506 aa11.94□□□□□ -0.5
CHD7-208ENST00000528280 ARMC9Q7Z3E5 817 aa11.94□□□□□ -0.5
CHD7-208ENST00000528280 CERS5Q8N5B7 392 aa11.94□□□□□ -0.5
CHD7-208ENST00000528280 VGLL2Q8N8G2 317 aa11.94□□□□□ -0.5
CHD7-208ENST00000528280 KLHDC4Q8TBB5 520 aa11.94□□□□□ -0.5
CHD7-208ENST00000528280 COPRSQ9NQ92 184 aa11.94□□□□□ -0.5
CHD7-208ENST00000528280 LRRFIP2Q9Y608 721 aaKnown RBP11.94□□□□□ -0.5
CHD7-208ENST00000528280 UNCXA6NJT0 531 aa11.93□□□□□ -0.5
CHD7-208ENST00000528280 F8W031 263 aaPredicted RBP11.93□□□□□ -0.5
CHD7-208ENST00000528280 MS4A1P11836 297 aa11.93□□□□□ -0.5
CHD7-208ENST00000528280 TRIM27P14373 513 aa11.93□□□□□ -0.5
CHD7-208ENST00000528280 FGFR2P21802 821 aa11.93□□□□□ -0.5
CHD7-208ENST00000528280 TNFAIP1Q13829 316 aa11.93□□□□□ -0.5
CHD7-208ENST00000528280 CFAP100Q494V2 611 aa11.93□□□□□ -0.5
CHD7-208ENST00000528280 HABP4Q5JVS0 413 aaKnown RBP11.93□□□□□ -0.5
CHD7-208ENST00000528280 WDR66Q8TBY9 1149 aa11.93□□□□□ -0.5
CHD7-208ENST00000528280 TTF2Q9UNY4 1162 aaKnown RBP11.93□□□□□ -0.5
CHD7-208ENST00000528280 AKAP2Q9Y2D5 859 aa11.93□□□□□ -0.5
CHD7-208ENST00000528280 SPDYE2BA6NHP3 402 aa11.92□□□□□ -0.5
CHD7-208ENST00000528280 ZBTB22O15209 634 aa11.92□□□□□ -0.5
CHD7-208ENST00000528280 SRGAP3O43295 1099 aa11.92□□□□□ -0.5
CHD7-208ENST00000528280 PPP1R12BO60237 982 aaPredicted RBP11.92□□□□□ -0.5
CHD7-208ENST00000528280 SPDYE6P0CI01 402 aa11.92□□□□□ -0.5
CHD7-208ENST00000528280 BCAMP50895 628 aa11.92□□□□□ -0.5
CHD7-208ENST00000528280 MTX1Q13505 466 aa11.92□□□□□ -0.5
CHD7-208ENST00000528280 TTLL12Q14166 644 aaPredicted RBP11.92□□□□□ -0.5
CHD7-208ENST00000528280 DLK2Q6UY11 383 aa11.92□□□□□ -0.5
CHD7-208ENST00000528280 ATG9AQ7Z3C6 839 aa11.92□□□□□ -0.5
CHD7-208ENST00000528280 PRMT6Q96LA8 375 aaPredicted RBP11.92□□□□□ -0.5
CHD7-208ENST00000528280 MEIS3Q99687 375 aa11.92□□□□□ -0.5
CHD7-208ENST00000528280 DEFB129Q9H1M3 183 aa11.92□□□□□ -0.5
CHD7-208ENST00000528280 MAST3O60307 1309 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms