RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 METTL24Q5JXM2 366 aa11.17□□□□□ -0.62
COL6A4P1-203ENST00000491915 MOB2Q70IA6 237 aa11.17□□□□□ -0.62
COL6A4P1-203ENST00000491915 ZNF804AQ7Z570 1209 aa11.17□□□□□ -0.62
COL6A4P1-203ENST00000491915 SULF1Q8IWU6 871 aa11.17□□□□□ -0.62
COL6A4P1-203ENST00000491915 OGFOD1Q8N543 542 aa11.17□□□□□ -0.62
COL6A4P1-203ENST00000491915 PRMT6Q96LA8 375 aaPredicted RBP11.17□□□□□ -0.62
COL6A4P1-203ENST00000491915 GBA2Q9HCG7 927 aaPredicted RBP11.17□□□□□ -0.62
COL6A4P1-203ENST00000491915 IQSEC3Q9UPP2 1182 aaPredicted RBP11.17□□□□□ -0.62
COL6A4P1-203ENST00000491915 PSME4Q14997 1843 aa11.16□□□□□ -0.62
COL6A4P1-203ENST00000491915 FAM205AQ6ZU69 1335 aa11.16□□□□□ -0.62
COL6A4P1-203ENST00000491915 MYO3BQ8WXR4 1341 aa11.16□□□□□ -0.62
COL6A4P1-203ENST00000491915 TRIM27P14373 513 aa11.16□□□□□ -0.62
COL6A4P1-203ENST00000491915 ECE1P42892 770 aa11.16□□□□□ -0.62
COL6A4P1-203ENST00000491915 HUNKP57058 714 aa11.16□□□□□ -0.62
COL6A4P1-203ENST00000491915 IFFO2Q5TF58 517 aa11.16□□□□□ -0.62
COL6A4P1-203ENST00000491915 FRAT1Q92837 279 aaPredicted RBP11.16□□□□□ -0.62
COL6A4P1-203ENST00000491915 CLUAP1Q96AJ1 413 aa11.16□□□□□ -0.62
COL6A4P1-203ENST00000491915 PA2G4Q9UQ80 394 aaKnown RBP11.16□□□□□ -0.62
COL6A4P1-203ENST00000491915 ZNF646O15015 1829 aaPredicted RBP11.15□□□□□ -0.62
COL6A4P1-203ENST00000491915 FAM155AB1AL88 458 aaPredicted RBP11.15□□□□□ -0.62
COL6A4P1-203ENST00000491915 ATF7IPQ6VMQ6 1270 aa11.15□□□□□ -0.62
COL6A4P1-203ENST00000491915 C2orf69Q8N8R5 385 aa11.15□□□□□ -0.62
COL6A4P1-203ENST00000491915 HHIPL1Q96JK4 782 aa11.15□□□□□ -0.62
COL6A4P1-203ENST00000491915 SIL1Q9H173 461 aa11.15□□□□□ -0.62
COL6A4P1-203ENST00000491915 HDAC9Q9UKV0 1011 aa11.15□□□□□ -0.62
COL6A4P1-203ENST00000491915 PITPNM2Q9BZ72 1349 aa11.14□□□□□ -0.63
COL6A4P1-203ENST00000491915 UBE2Q2LH0YL09 131 aa11.14□□□□□ -0.63
COL6A4P1-203ENST00000491915 IPO8O15397 1037 aaKnown RBP11.14□□□□□ -0.63
COL6A4P1-203ENST00000491915 MAP2K2P36507 400 aa11.14□□□□□ -0.63
COL6A4P1-203ENST00000491915 MMP14P50281 582 aa11.14□□□□□ -0.63
COL6A4P1-203ENST00000491915 LBX1P52954 281 aa11.14□□□□□ -0.63
COL6A4P1-203ENST00000491915 FKBP1AP62942 108 aaKnown RBP11.14□□□□□ -0.63
COL6A4P1-203ENST00000491915 DLGAP5Q15398 846 aa11.14□□□□□ -0.63
COL6A4P1-203ENST00000491915 CFAP100Q494V2 611 aa11.14□□□□□ -0.63
COL6A4P1-203ENST00000491915 RGMBQ6NW40 437 aa11.14□□□□□ -0.63
COL6A4P1-203ENST00000491915 MTMR14Q8NCE2 650 aa11.14□□□□□ -0.63
COL6A4P1-203ENST00000491915 HSPA8P11142 646 aaKnown RBP11.13□□□□□ -0.63
COL6A4P1-203ENST00000491915 CTCFP49711 727 aaPredicted RBP11.13□□□□□ -0.63
COL6A4P1-203ENST00000491915 MAP2K1Q02750 393 aaPredicted RBP11.13□□□□□ -0.63
COL6A4P1-203ENST00000491915 CHAF1AQ13111 956 aaPredicted RBP11.13□□□□□ -0.63
COL6A4P1-203ENST00000491915 MFSD14BQ5SR56 506 aa11.13□□□□□ -0.63
COL6A4P1-203ENST00000491915 TMEM57Q8N5G2 664 aa11.13□□□□□ -0.63
COL6A4P1-203ENST00000491915 COPRSQ9NQ92 184 aa11.13□□□□□ -0.63
COL6A4P1-203ENST00000491915 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.13□□□□□ -0.63
COL6A4P1-203ENST00000491915 A0A1B0GUL6 1792 aa11.13□□□□□ -0.63
COL6A4P1-203ENST00000491915 KIF16BQ96L93 1317 aa11.12□□□□□ -0.63
COL6A4P1-203ENST00000491915 CLRN2A0PK11 232 aa11.12□□□□□ -0.63
COL6A4P1-203ENST00000491915 SPDYE2BA6NHP3 402 aa11.12□□□□□ -0.63
COL6A4P1-203ENST00000491915 CIAO1O76071 339 aa11.12□□□□□ -0.63
COL6A4P1-203ENST00000491915 SPDYE6P0CI01 402 aa11.12□□□□□ -0.63
COL6A4P1-203ENST00000491915 RLBP1P12271 317 aa11.12□□□□□ -0.63
COL6A4P1-203ENST00000491915 ZNF157P51786 506 aaPredicted RBP11.12□□□□□ -0.63
COL6A4P1-203ENST00000491915 KIF23Q02241 960 aaPredicted RBP11.12□□□□□ -0.63
COL6A4P1-203ENST00000491915 PUM3Q15397 648 aaKnown RBP11.12□□□□□ -0.63
COL6A4P1-203ENST00000491915 ZKSCAN2Q63HK3 967 aa11.12□□□□□ -0.63
COL6A4P1-203ENST00000491915 AIDAQ96BJ3 306 aa11.12□□□□□ -0.63
COL6A4P1-203ENST00000491915 CEP126Q9P2H0 1117 aa11.12□□□□□ -0.63
COL6A4P1-203ENST00000491915 TSKSQ9UJT2 592 aa11.12□□□□□ -0.63
COL6A4P1-203ENST00000491915 TTF2Q9UNY4 1162 aaKnown RBP11.12□□□□□ -0.63
COL6A4P1-203ENST00000491915 FZD1Q9UP38 647 aa11.12□□□□□ -0.63
COL6A4P1-203ENST00000491915 GNAI3P08754 354 aa11.11□□□□□ -0.63
COL6A4P1-203ENST00000491915 IFIT1P09914 478 aaKnown RBP11.11□□□□□ -0.63
COL6A4P1-203ENST00000491915 ADORA1P30542 326 aa11.11□□□□□ -0.63
COL6A4P1-203ENST00000491915 RBM5P52756 815 aaKnown RBP eCLIP11.11□□□□□ -0.63
COL6A4P1-203ENST00000491915 TIMM10P62072 90 aa11.11□□□□□ -0.63
COL6A4P1-203ENST00000491915 PRKG1Q13976 671 aa11.11□□□□□ -0.63
COL6A4P1-203ENST00000491915 CAVIN4Q5BKX8 364 aa11.11□□□□□ -0.63
COL6A4P1-203ENST00000491915 VPS37DQ86XT2 251 aa11.11□□□□□ -0.63
COL6A4P1-203ENST00000491915 LPIN2Q92539 896 aa11.11□□□□□ -0.63
COL6A4P1-203ENST00000491915 CSRNP1Q96S65 589 aa11.11□□□□□ -0.63
COL6A4P1-203ENST00000491915 DEFB129Q9H1M3 183 aa11.11□□□□□ -0.63
COL6A4P1-203ENST00000491915 TDRD3Q9H7E2 651 aaKnown RBP11.11□□□□□ -0.63
COL6A4P1-203ENST00000491915 PRDM10Q9NQV6 1147 aa11.11□□□□□ -0.63
COL6A4P1-203ENST00000491915 FBXO3Q9UK99 471 aa11.11□□□□□ -0.63
COL6A4P1-203ENST00000491915 PNMA6EA0A0J9YXQ4 647 aa11.1□□□□□ -0.63
COL6A4P1-203ENST00000491915 SRGAP3O43295 1099 aa11.1□□□□□ -0.63
COL6A4P1-203ENST00000491915 SLC5A1P13866 664 aa11.1□□□□□ -0.63
COL6A4P1-203ENST00000491915 IL15P40933 162 aaPredicted RBP11.1□□□□□ -0.63
COL6A4P1-203ENST00000491915 MTX1Q13505 466 aa11.1□□□□□ -0.63
COL6A4P1-203ENST00000491915 NBPF12Q5TAG4 269 aaPredicted RBP11.1□□□□□ -0.63
COL6A4P1-203ENST00000491915 DZIP1LQ8IYY4 767 aaKnown RBP11.1□□□□□ -0.63
COL6A4P1-203ENST00000491915 TNS4Q8IZW8 715 aa11.1□□□□□ -0.63
COL6A4P1-203ENST00000491915 CCDC102AQ96A19 550 aa11.1□□□□□ -0.63
COL6A4P1-203ENST00000491915 ZNF70Q9UC06 446 aaPredicted RBP11.1□□□□□ -0.63
COL6A4P1-203ENST00000491915 HDAC5Q9UQL6 1122 aa11.1□□□□□ -0.63
COL6A4P1-203ENST00000491915 ZBED9Q6R2W3 1325 aa11.09□□□□□ -0.63
COL6A4P1-203ENST00000491915 PCNTO95613 3336 aa11.09□□□□□ -0.63
COL6A4P1-203ENST00000491915 ZBTB7BO15156 539 aaPredicted RBP11.09□□□□□ -0.63
COL6A4P1-203ENST00000491915 FRAT2O75474 233 aaPredicted RBP11.09□□□□□ -0.63
COL6A4P1-203ENST00000491915 GNAI2P04899 355 aa11.09□□□□□ -0.63
COL6A4P1-203ENST00000491915 SLC10A3P09131 477 aa11.09□□□□□ -0.63
COL6A4P1-203ENST00000491915 PHKA1P46020 1223 aa11.09□□□□□ -0.63
COL6A4P1-203ENST00000491915 CRKP46108 304 aa11.09□□□□□ -0.63
COL6A4P1-203ENST00000491915 FKBP1BP68106 108 aa11.09□□□□□ -0.63
COL6A4P1-203ENST00000491915 TFCP2Q12800 502 aa11.09□□□□□ -0.63
COL6A4P1-203ENST00000491915 NOGQ13253 232 aa11.09□□□□□ -0.63
COL6A4P1-203ENST00000491915 TTLL12Q14166 644 aaPredicted RBP11.09□□□□□ -0.63
COL6A4P1-203ENST00000491915 RASA3Q14644 834 aa11.09□□□□□ -0.63
COL6A4P1-203ENST00000491915 LDLRAD1Q5T700 205 aa11.09□□□□□ -0.63
COL6A4P1-203ENST00000491915 RASAL3Q86YV0 1011 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms