RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 DLGAP5Q15398 846 aa14.89□□□□□ -0.03
SEMA6C-208ENST00000489944 CAVIN4Q5BKX8 364 aa14.89□□□□□ -0.03
SEMA6C-208ENST00000489944 TDRD7Q8NHU6 1098 aaKnown RBP14.89□□□□□ -0.03
SEMA6C-208ENST00000489944 TBC1D22AQ8WUA7 517 aa14.89□□□□□ -0.03
SEMA6C-208ENST00000489944 IPO8O15397 1037 aaKnown RBP14.88□□□□□ -0.03
SEMA6C-208ENST00000489944 PDE8BO95263 885 aa14.88□□□□□ -0.03
SEMA6C-208ENST00000489944 KLRK1P26718 216 aa14.88□□□□□ -0.03
SEMA6C-208ENST00000489944 LBX1P52954 281 aa14.88□□□□□ -0.03
SEMA6C-208ENST00000489944 NBPF9Q3BBW0 867 aa14.88□□□□□ -0.03
SEMA6C-208ENST00000489944 KIAA0825Q8IV33 1275 aa14.88□□□□□ -0.03
SEMA6C-208ENST00000489944 ANKRD44Q8N8A2 993 aa14.88□□□□□ -0.03
SEMA6C-208ENST00000489944 HELBQ8NG08 1087 aaPredicted RBP14.88□□□□□ -0.03
SEMA6C-208ENST00000489944 SUGT1Q9Y2Z0 365 aa14.88□□□□□ -0.03
SEMA6C-208ENST00000489944 FAM155AB1AL88 458 aaPredicted RBP14.87□□□□□ -0.03
SEMA6C-208ENST00000489944 HDLBPQ00341 1268 aaKnown RBP14.87□□□□□ -0.03
SEMA6C-208ENST00000489944 ARMC9Q7Z3E5 817 aa14.87□□□□□ -0.03
SEMA6C-208ENST00000489944 CDCA7LQ96GN5 454 aa14.87□□□□□ -0.03
SEMA6C-208ENST00000489944 ZNF594Q96JF6 807 aaPredicted RBP14.87□□□□□ -0.03
SEMA6C-208ENST00000489944 MRIQ9BWK5 157 aa14.87□□□□□ -0.03
SEMA6C-208ENST00000489944 SERPINA10Q9UK55 444 aa14.87□□□□□ -0.03
SEMA6C-208ENST00000489944 IFIT1P09914 478 aaKnown RBP14.86□□□□□ -0.03
SEMA6C-208ENST00000489944 UBTFL1P0CB47 393 aaPredicted RBP14.86□□□□□ -0.03
SEMA6C-208ENST00000489944 GRM1Q13255 1194 aa14.86□□□□□ -0.03
SEMA6C-208ENST00000489944 TNFAIP1Q13829 316 aa14.86□□□□□ -0.03
SEMA6C-208ENST00000489944 PUM3Q15397 648 aaKnown RBP14.86□□□□□ -0.03
SEMA6C-208ENST00000489944 METTL24Q5JXM2 366 aa14.86□□□□□ -0.03
SEMA6C-208ENST00000489944 FBXO33Q7Z6M2 555 aa14.86□□□□□ -0.03
SEMA6C-208ENST00000489944 VPS37DQ86XT2 251 aa14.86□□□□□ -0.03
SEMA6C-208ENST00000489944 FAM84BQ96KN1 310 aaPredicted RBP14.86□□□□□ -0.03
SEMA6C-208ENST00000489944 SPDYE2BA6NHP3 402 aa14.85□□□□□ -0.03
SEMA6C-208ENST00000489944 PLIN1O60240 522 aa14.85□□□□□ -0.03
SEMA6C-208ENST00000489944 AOC2O75106 756 aa14.85□□□□□ -0.03
SEMA6C-208ENST00000489944 CIAO1O76071 339 aa14.85□□□□□ -0.03
SEMA6C-208ENST00000489944 SPDYE6P0CI01 402 aa14.85□□□□□ -0.03
SEMA6C-208ENST00000489944 RARSP54136 660 aaKnown RBP14.85□□□□□ -0.03
SEMA6C-208ENST00000489944 SUPT20HL1Q3ZLR7 823 aa14.85□□□□□ -0.03
SEMA6C-208ENST00000489944 VGLL2Q8N8G2 317 aa14.85□□□□□ -0.03
SEMA6C-208ENST00000489944 MAST3O60307 1309 aa14.85□□□□□ -0.03
SEMA6C-208ENST00000489944 ASTN2O75129 1339 aaPredicted RBP14.85□□□□□ -0.03
SEMA6C-208ENST00000489944 EYA2O00167 538 aa14.84□□□□□ -0.03
SEMA6C-208ENST00000489944 GNAI3P08754 354 aa14.84□□□□□ -0.03
SEMA6C-208ENST00000489944 MAP3K11Q16584 847 aa14.84□□□□□ -0.03
SEMA6C-208ENST00000489944 MFSD14BQ5SR56 506 aa14.84□□□□□ -0.03
SEMA6C-208ENST00000489944 INTS3Q68E01 1043 aaKnown RBP14.84□□□□□ -0.03
SEMA6C-208ENST00000489944 CERS5Q8N5B7 392 aa14.84□□□□□ -0.03
SEMA6C-208ENST00000489944 MXD3Q9BW11 206 aa14.84□□□□□ -0.03
SEMA6C-208ENST00000489944 NOB1Q9ULX3 412 aaKnown RBP14.84□□□□□ -0.03
SEMA6C-208ENST00000489944 ECM29Q5VYK3 1845 aa14.84□□□□□ -0.03
SEMA6C-208ENST00000489944 PPP1R12BO60237 982 aaPredicted RBP14.83□□□□□ -0.04
SEMA6C-208ENST00000489944 FGFR2P21802 821 aa14.83□□□□□ -0.04
SEMA6C-208ENST00000489944 KIF23Q02241 960 aaPredicted RBP14.83□□□□□ -0.04
SEMA6C-208ENST00000489944 CFAP100Q494V2 611 aa14.83□□□□□ -0.04
SEMA6C-208ENST00000489944 LPIN2Q92539 896 aa14.83□□□□□ -0.04
SEMA6C-208ENST00000489944 PUS3Q9BZE2 481 aaKnown RBP14.83□□□□□ -0.04
SEMA6C-208ENST00000489944 DEFB129Q9H1M3 183 aa14.83□□□□□ -0.04
SEMA6C-208ENST00000489944 SNAP23O00161 211 aa14.82□□□□□ -0.04
SEMA6C-208ENST00000489944 SLC5A1P13866 664 aa14.82□□□□□ -0.04
SEMA6C-208ENST00000489944 INHBEP58166 350 aa14.82□□□□□ -0.04
SEMA6C-208ENST00000489944 PTPN12Q05209 780 aaKnown RBP14.82□□□□□ -0.04
SEMA6C-208ENST00000489944 LRRC24Q50LG9 513 aa14.82□□□□□ -0.04
SEMA6C-208ENST00000489944 NOM1Q5C9Z4 860 aaKnown RBP14.82□□□□□ -0.04
SEMA6C-208ENST00000489944 RASAL3Q86YV0 1011 aa14.82□□□□□ -0.04
SEMA6C-208ENST00000489944 ARAP2Q8WZ64 1704 aa14.81□□□□□ -0.04
SEMA6C-208ENST00000489944 SEMA3EO15041 775 aa14.81□□□□□ -0.04
SEMA6C-208ENST00000489944 FRAT2O75474 233 aaPredicted RBP14.81□□□□□ -0.04
SEMA6C-208ENST00000489944 IL15P40933 162 aaPredicted RBP14.81□□□□□ -0.04
SEMA6C-208ENST00000489944 GYG1P46976 350 aa14.81□□□□□ -0.04
SEMA6C-208ENST00000489944 RFX5P48382 616 aaPredicted RBP14.81□□□□□ -0.04
SEMA6C-208ENST00000489944 TNNI2P48788 182 aa14.81□□□□□ -0.04
SEMA6C-208ENST00000489944 SREBF2Q12772 1141 aa14.81□□□□□ -0.04
SEMA6C-208ENST00000489944 TTLL12Q14166 644 aaPredicted RBP14.81□□□□□ -0.04
SEMA6C-208ENST00000489944 LDLRAD1Q5T700 205 aa14.81□□□□□ -0.04
SEMA6C-208ENST00000489944 HOOK2Q96ED9 719 aa14.81□□□□□ -0.04
SEMA6C-208ENST00000489944 TTF2Q9UNY4 1162 aaKnown RBP14.81□□□□□ -0.04
SEMA6C-208ENST00000489944 TM4SF4P48230 202 aa14.8□□□□□ -0.04
SEMA6C-208ENST00000489944 MTX1Q13505 466 aa14.8□□□□□ -0.04
SEMA6C-208ENST00000489944 SPDYE2Q495Y8 402 aa14.8□□□□□ -0.04
SEMA6C-208ENST00000489944 FKBP1CQ5VVH2 108 aa14.8□□□□□ -0.04
SEMA6C-208ENST00000489944 DLK2Q6UY11 383 aa14.8□□□□□ -0.04
SEMA6C-208ENST00000489944 WDR66Q8TBY9 1149 aa14.8□□□□□ -0.04
SEMA6C-208ENST00000489944 PRMT6Q96LA8 375 aaPredicted RBP14.8□□□□□ -0.04
SEMA6C-208ENST00000489944 CSRNP1Q96S65 589 aa14.8□□□□□ -0.04
SEMA6C-208ENST00000489944 CFHR5Q9BXR6 569 aa14.8□□□□□ -0.04
SEMA6C-208ENST00000489944 COPRSQ9NQ92 184 aa14.8□□□□□ -0.04
SEMA6C-208ENST00000489944 GNL3LQ9NVN8 582 aaKnown RBP14.8□□□□□ -0.04
SEMA6C-208ENST00000489944 CEP126Q9P2H0 1117 aa14.8□□□□□ -0.04
SEMA6C-208ENST00000489944 ALDH1A1P00352 501 aa14.79□□□□□ -0.04
SEMA6C-208ENST00000489944 ZBTB48P10074 688 aaPredicted RBP14.79□□□□□ -0.04
SEMA6C-208ENST00000489944 RBM5P52756 815 aaKnown RBP eCLIP14.79□□□□□ -0.04
SEMA6C-208ENST00000489944 AKAP11Q9UKA4 1901 aa14.79□□□□□ -0.04
SEMA6C-208ENST00000489944 UBE2Q2LH0YL09 131 aa14.78□□□□□ -0.04
SEMA6C-208ENST00000489944 IREB2P48200 963 aaKnown RBP14.78□□□□□ -0.04
SEMA6C-208ENST00000489944 DIEXFQ68CQ4 756 aaKnown RBP14.78□□□□□ -0.04
SEMA6C-208ENST00000489944 HHIPL2Q6UWX4 724 aa14.78□□□□□ -0.04
SEMA6C-208ENST00000489944 ATF7IPQ6VMQ6 1270 aa14.78□□□□□ -0.04
SEMA6C-208ENST00000489944 ATG9AQ7Z3C6 839 aa14.78□□□□□ -0.04
SEMA6C-208ENST00000489944 DZIP1LQ8IYY4 767 aaKnown RBP14.78□□□□□ -0.04
SEMA6C-208ENST00000489944 TEKT1Q969V4 418 aa14.78□□□□□ -0.04
SEMA6C-208ENST00000489944 ZDHHC15Q96MV8 337 aa14.78□□□□□ -0.04
SEMA6C-208ENST00000489944 RNF186Q9NXI6 227 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms