RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 EYA2O00167 538 aa22.04■■□□□ 1.12
COL6A1-204ENST00000486023 WNT10BO00744 389 aa22.04■■□□□ 1.12
COL6A1-204ENST00000486023 AOC2O75106 756 aa22.04■■□□□ 1.12
COL6A1-204ENST00000486023 RFX5P48382 616 aaPredicted RBP22.04■■□□□ 1.12
COL6A1-204ENST00000486023 RBM5P52756 815 aaKnown RBP eCLIP22.04■■□□□ 1.12
COL6A1-204ENST00000486023 PTPN12Q05209 780 aaKnown RBP22.04■■□□□ 1.12
COL6A1-204ENST00000486023 CHAF1AQ13111 956 aaPredicted RBP22.04■■□□□ 1.12
COL6A1-204ENST00000486023 CAVIN4Q5BKX8 364 aa22.04■■□□□ 1.12
COL6A1-204ENST00000486023 GBA2Q9HCG7 927 aaPredicted RBP22.04■■□□□ 1.12
COL6A1-204ENST00000486023 DLGAP5Q15398 846 aa22.03■■□□□ 1.12
COL6A1-204ENST00000486023 ZKSCAN2Q63HK3 967 aa22.03■■□□□ 1.12
COL6A1-204ENST00000486023 PA2G4Q9UQ80 394 aaKnown RBP22.03■■□□□ 1.12
COL6A1-204ENST00000486023 ZNF609O15014 1411 aa22.03■■□□□ 1.12
COL6A1-204ENST00000486023 GNAI3P08754 354 aa22.02■■□□□ 1.12
COL6A1-204ENST00000486023 BCAMP50895 628 aa22.02■■□□□ 1.12
COL6A1-204ENST00000486023 COL13A1Q5TAT6 717 aaPredicted RBP22.02■■□□□ 1.12
COL6A1-204ENST00000486023 TDRD7Q8NHU6 1098 aaKnown RBP22.02■■□□□ 1.12
COL6A1-204ENST00000486023 PCDHAC2Q9Y5I4 1007 aa22.02■■□□□ 1.12
COL6A1-204ENST00000486023 IFIT1P09914 478 aaKnown RBP22.01■■□□□ 1.11
COL6A1-204ENST00000486023 PUM3Q15397 648 aaKnown RBP22.01■■□□□ 1.11
COL6A1-204ENST00000486023 MFSD14BQ5SR56 506 aa22.01■■□□□ 1.11
COL6A1-204ENST00000486023 VGLL2Q8N8G2 317 aa22.01■■□□□ 1.11
COL6A1-204ENST00000486023 ZBED9Q6R2W3 1325 aa22.01■■□□□ 1.11
COL6A1-204ENST00000486023 FOXN1O15353 648 aa22■■□□□ 1.11
COL6A1-204ENST00000486023 TTLL12Q14166 644 aaPredicted RBP22■■□□□ 1.11
COL6A1-204ENST00000486023 CFAP100Q494V2 611 aa22■■□□□ 1.11
COL6A1-204ENST00000486023 ATG9AQ7Z3C6 839 aa22■■□□□ 1.11
COL6A1-204ENST00000486023 FBXO33Q7Z6M2 555 aa22■■□□□ 1.11
COL6A1-204ENST00000486023 TMEM57Q8N5G2 664 aa22■■□□□ 1.11
COL6A1-204ENST00000486023 SLC5A1P13866 664 aa21.99■■□□□ 1.11
COL6A1-204ENST00000486023 MAP2K1Q02750 393 aaPredicted RBP21.99■■□□□ 1.11
COL6A1-204ENST00000486023 FTSJ3Q8IY81 847 aaKnown RBP21.99■■□□□ 1.11
COL6A1-204ENST00000486023 BEGAINQ9BUH8 593 aa21.99■■□□□ 1.11
COL6A1-204ENST00000486023 CEP126Q9P2H0 1117 aa21.99■■□□□ 1.11
COL6A1-204ENST00000486023 TTF2Q9UNY4 1162 aaKnown RBP21.99■■□□□ 1.11
COL6A1-204ENST00000486023 PITPNM2Q9BZ72 1349 aa21.99■■□□□ 1.11
COL6A1-204ENST00000486023 CLRN2A0PK11 232 aa21.98■■□□□ 1.11
COL6A1-204ENST00000486023 SRGAP3O43295 1099 aa21.98■■□□□ 1.11
COL6A1-204ENST00000486023 MMP14P50281 582 aa21.98■■□□□ 1.11
COL6A1-204ENST00000486023 ZNF157P51786 506 aaPredicted RBP21.98■■□□□ 1.11
COL6A1-204ENST00000486023 PRKG1Q13976 671 aa21.98■■□□□ 1.11
COL6A1-204ENST00000486023 MOB2Q70IA6 237 aa21.98■■□□□ 1.11
COL6A1-204ENST00000486023 WBP1LQ9NX94 342 aa21.98■■□□□ 1.11
COL6A1-204ENST00000486023 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.98■■□□□ 1.11
COL6A1-204ENST00000486023 TRPM7Q96QT4 1865 aa21.97■■□□□ 1.11
COL6A1-204ENST00000486023 GNAI2P04899 355 aa21.97■■□□□ 1.11
COL6A1-204ENST00000486023 FKBP1AP62942 108 aaKnown RBP21.97■■□□□ 1.11
COL6A1-204ENST00000486023 RGMBQ6NW40 437 aa21.97■■□□□ 1.11
COL6A1-204ENST00000486023 LPIN2Q92539 896 aa21.97■■□□□ 1.11
COL6A1-204ENST00000486023 PRMT6Q96LA8 375 aaPredicted RBP21.97■■□□□ 1.11
COL6A1-204ENST00000486023 VEZTQ9HBM0 779 aa21.97■■□□□ 1.11
COL6A1-204ENST00000486023 FAM205AQ6ZU69 1335 aa21.97■■□□□ 1.11
COL6A1-204ENST00000486023 PSME4Q14997 1843 aa21.96■■□□□ 1.11
COL6A1-204ENST00000486023 MYO1BO43795 1136 aa21.96■■□□□ 1.11
COL6A1-204ENST00000486023 HHIPL1Q96JK4 782 aa21.96■■□□□ 1.11
COL6A1-204ENST00000486023 POLR2AP24928 1970 aaKnown RBP21.96■■□□□ 1.11
COL6A1-204ENST00000486023 UBE2Q2LH0YL09 131 aa21.95■■□□□ 1.1
COL6A1-204ENST00000486023 CIAO1O76071 339 aa21.95■■□□□ 1.1
COL6A1-204ENST00000486023 FGFR2P21802 821 aa21.95■■□□□ 1.1
COL6A1-204ENST00000486023 IL15P40933 162 aaPredicted RBP21.95■■□□□ 1.1
COL6A1-204ENST00000486023 GRIK5Q16478 980 aa21.95■■□□□ 1.1
COL6A1-204ENST00000486023 ATP2B3Q16720 1220 aa21.95■■□□□ 1.1
COL6A1-204ENST00000486023 APOBEC3FQ8IUX4 373 aaKnown RBP21.95■■□□□ 1.1
COL6A1-204ENST00000486023 A0A1B0GUL6 1792 aa21.94■■□□□ 1.1
COL6A1-204ENST00000486023 NF2P35240 595 aa21.94■■□□□ 1.1
COL6A1-204ENST00000486023 MAP2K2P36507 400 aa21.94■■□□□ 1.1
COL6A1-204ENST00000486023 CTCFP49711 727 aaPredicted RBP21.94■■□□□ 1.1
COL6A1-204ENST00000486023 LBX1P52954 281 aa21.94■■□□□ 1.1
COL6A1-204ENST00000486023 ITPRIPQ8IWB1 547 aa21.94■■□□□ 1.1
COL6A1-204ENST00000486023 ZBED3Q96IU2 234 aaPredicted RBP21.94■■□□□ 1.1
COL6A1-204ENST00000486023 ZIC5Q96T25 663 aa21.94■■□□□ 1.1
COL6A1-204ENST00000486023 TSKSQ9UJT2 592 aa21.94■■□□□ 1.1
COL6A1-204ENST00000486023 SPDYE2BA6NHP3 402 aa21.93■■□□□ 1.1
COL6A1-204ENST00000486023 SPDYE6P0CI01 402 aa21.93■■□□□ 1.1
COL6A1-204ENST00000486023 DZIP1LQ8IYY4 767 aaKnown RBP21.93■■□□□ 1.1
COL6A1-204ENST00000486023 DEFB129Q9H1M3 183 aa21.93■■□□□ 1.1
COL6A1-204ENST00000486023 COPRSQ9NQ92 184 aa21.93■■□□□ 1.1
COL6A1-204ENST00000486023 FBXO3Q9UK99 471 aa21.93■■□□□ 1.1
COL6A1-204ENST00000486023 AOX1Q06278 1338 aa21.92■■□□□ 1.1
COL6A1-204ENST00000486023 MTMR14Q8NCE2 650 aa21.92■■□□□ 1.1
COL6A1-204ENST00000486023 C1orf115Q9H7X2 142 aa21.92■■□□□ 1.1
COL6A1-204ENST00000486023 CRKP46108 304 aa21.91■■□□□ 1.1
COL6A1-204ENST00000486023 TIMM10P62072 90 aa21.91■■□□□ 1.1
COL6A1-204ENST00000486023 NOGQ13253 232 aa21.91■■□□□ 1.1
COL6A1-204ENST00000486023 TNS4Q8IZW8 715 aa21.91■■□□□ 1.1
COL6A1-204ENST00000486023 TBC1D22AQ8WUA7 517 aa21.91■■□□□ 1.1
COL6A1-204ENST00000486023 CCDC102AQ96A19 550 aa21.91■■□□□ 1.1
COL6A1-204ENST00000486023 TDRD3Q9H7E2 651 aaKnown RBP21.91■■□□□ 1.1
COL6A1-204ENST00000486023 FZD1Q9UP38 647 aa21.91■■□□□ 1.1
COL6A1-204ENST00000486023 RLBP1P12271 317 aa21.9■■□□□ 1.1
COL6A1-204ENST00000486023 ADORA1P30542 326 aa21.9■■□□□ 1.1
COL6A1-204ENST00000486023 TFCP2Q12800 502 aa21.9■■□□□ 1.1
COL6A1-204ENST00000486023 IFFO2Q5TF58 517 aa21.9■■□□□ 1.1
COL6A1-204ENST00000486023 GNL3LQ9NVN8 582 aaKnown RBP21.9■■□□□ 1.1
COL6A1-204ENST00000486023 SERPINA10Q9UK55 444 aa21.9■■□□□ 1.1
COL6A1-204ENST00000486023 PNMA6EA0A0J9YXQ4 647 aa21.89■■□□□ 1.09
COL6A1-204ENST00000486023 FKBP1BP68106 108 aa21.89■■□□□ 1.09
COL6A1-204ENST00000486023 KIF23Q02241 960 aaPredicted RBP21.89■■□□□ 1.09
COL6A1-204ENST00000486023 NEUROD6Q96NK8 337 aa21.89■■□□□ 1.09
COL6A1-204ENST00000486023 ZNF646O15015 1829 aaPredicted RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms