RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 UBE2Q2LH0YL09 131 aa14.48□□□□□ -0.09
SCFD1-206ENST00000484733 RGS19P49795 217 aa14.48□□□□□ -0.09
SCFD1-206ENST00000484733 PTPRCP08575 1304 aa14.48□□□□□ -0.09
SCFD1-206ENST00000484733 FAM205AQ6ZU69 1335 aa14.48□□□□□ -0.09
SCFD1-206ENST00000484733 E9PSI1 815 aa14.48□□□□□ -0.09
SCFD1-206ENST00000484733 DLGAP5Q15398 846 aa14.48□□□□□ -0.09
SCFD1-206ENST00000484733 PRAMEF18Q5VWM3 479 aa14.48□□□□□ -0.09
SCFD1-206ENST00000484733 MOB2Q70IA6 237 aa14.48□□□□□ -0.09
SCFD1-206ENST00000484733 SCAF8Q9UPN6 1271 aaKnown RBP14.48□□□□□ -0.09
SCFD1-206ENST00000484733 PPP2R3BQ9Y5P8 575 aa14.48□□□□□ -0.09
SCFD1-206ENST00000484733 TRPA1O75762 1119 aa14.47□□□□□ -0.09
SCFD1-206ENST00000484733 DGKZQ13574 1117 aa14.47□□□□□ -0.09
SCFD1-206ENST00000484733 RABL6Q3YEC7 729 aaPredicted RBP14.47□□□□□ -0.09
SCFD1-206ENST00000484733 ARMC9Q7Z3E5 817 aa14.47□□□□□ -0.09
SCFD1-206ENST00000484733 TDRD7Q8NHU6 1098 aaKnown RBP14.47□□□□□ -0.09
SCFD1-206ENST00000484733 RIPOR2Q9Y4F9 1068 aa14.47□□□□□ -0.09
SCFD1-206ENST00000484733 CCDC85CA6NKD9 419 aa14.46□□□□□ -0.09
SCFD1-206ENST00000484733 TM4SF4P48230 202 aa14.46□□□□□ -0.09
SCFD1-206ENST00000484733 LDLRAD1Q5T700 205 aa14.46□□□□□ -0.09
SCFD1-206ENST00000484733 UNCXA6NJT0 531 aa14.46□□□□□ -0.1
SCFD1-206ENST00000484733 NBPF7P0C2Y1 421 aaPredicted RBP14.46□□□□□ -0.1
SCFD1-206ENST00000484733 SLFN5Q08AF3 891 aa14.46□□□□□ -0.1
SCFD1-206ENST00000484733 TTLL12Q14166 644 aaPredicted RBP14.46□□□□□ -0.1
SCFD1-206ENST00000484733 MAP3K11Q16584 847 aa14.46□□□□□ -0.1
SCFD1-206ENST00000484733 MROH5Q6ZUA9 1318 aa14.45□□□□□ -0.1
SCFD1-206ENST00000484733 PLIN1O60240 522 aa14.45□□□□□ -0.1
SCFD1-206ENST00000484733 CFAP100Q494V2 611 aa14.45□□□□□ -0.1
SCFD1-206ENST00000484733 SPDYE2BA6NHP3 402 aa14.44□□□□□ -0.1
SCFD1-206ENST00000484733 SPDYE6P0CI01 402 aa14.44□□□□□ -0.1
SCFD1-206ENST00000484733 PTPN12Q05209 780 aaKnown RBP14.44□□□□□ -0.1
SCFD1-206ENST00000484733 FAM84BQ96KN1 310 aaPredicted RBP14.44□□□□□ -0.1
SCFD1-206ENST00000484733 PUS3Q9BZE2 481 aaKnown RBP14.44□□□□□ -0.1
SCFD1-206ENST00000484733 DEFB129Q9H1M3 183 aa14.44□□□□□ -0.1
SCFD1-206ENST00000484733 MYO1BO43795 1136 aa14.44□□□□□ -0.1
SCFD1-206ENST00000484733 HIBADHP31937 336 aaKnown RBP14.44□□□□□ -0.1
SCFD1-206ENST00000484733 ALDH1L2Q3SY69 923 aa14.44□□□□□ -0.1
SCFD1-206ENST00000484733 NOM1Q5C9Z4 860 aaKnown RBP14.44□□□□□ -0.1
SCFD1-206ENST00000484733 ANKRD44Q8N8A2 993 aa14.44□□□□□ -0.1
SCFD1-206ENST00000484733 BICC1Q9H694 974 aaKnown RBP14.44□□□□□ -0.1
SCFD1-206ENST00000484733 ARAP2Q8WZ64 1704 aa14.44□□□□□ -0.1
SCFD1-206ENST00000484733 SSH1Q8WYL5 1049 aa14.43□□□□□ -0.1
SCFD1-206ENST00000484733 PRMT6Q96LA8 375 aaPredicted RBP14.43□□□□□ -0.1
SCFD1-206ENST00000484733 CFHR5Q9BXR6 569 aa14.43□□□□□ -0.1
SCFD1-206ENST00000484733 FBXO33Q7Z6M2 555 aa14.43□□□□□ -0.1
SCFD1-206ENST00000484733 TRMT2AQ8IZ69 625 aaKnown RBP14.43□□□□□ -0.1
SCFD1-206ENST00000484733 SREBF2Q12772 1141 aa14.42□□□□□ -0.1
SCFD1-206ENST00000484733 SUPT20HL1Q3ZLR7 823 aa14.42□□□□□ -0.1
SCFD1-206ENST00000484733 SERPINA10Q9UK55 444 aa14.42□□□□□ -0.1
SCFD1-206ENST00000484733 LAMB1P07942 1786 aa14.42□□□□□ -0.1
SCFD1-206ENST00000484733 F8W031 263 aaPredicted RBP14.42□□□□□ -0.1
SCFD1-206ENST00000484733 GYG1P46976 350 aa14.42□□□□□ -0.1
SCFD1-206ENST00000484733 CTU1Q7Z7A3 348 aaKnown RBP14.42□□□□□ -0.1
SCFD1-206ENST00000484733 ANGEL1Q9UNK9 670 aaKnown RBP14.42□□□□□ -0.1
SCFD1-206ENST00000484733 PCDHAC2Q9Y5I4 1007 aa14.42□□□□□ -0.1
SCFD1-206ENST00000484733 SPRYD7Q5W111 196 aa14.41□□□□□ -0.1
SCFD1-206ENST00000484733 VGLL2Q8N8G2 317 aa14.41□□□□□ -0.1
SCFD1-206ENST00000484733 USP44Q9H0E7 712 aa14.41□□□□□ -0.1
SCFD1-206ENST00000484733 SSC5DA1L4H1 1573 aa14.41□□□□□ -0.1
SCFD1-206ENST00000484733 PPP1R12BO60237 982 aaPredicted RBP14.41□□□□□ -0.1
SCFD1-206ENST00000484733 CT47B1P0C2W7 299 aaPredicted RBP14.41□□□□□ -0.1
SCFD1-206ENST00000484733 MFSD14BQ5SR56 506 aa14.41□□□□□ -0.1
SCFD1-206ENST00000484733 KIF16BQ96L93 1317 aa14.41□□□□□ -0.1
SCFD1-206ENST00000484733 INHBEP58166 350 aa14.4□□□□□ -0.1
SCFD1-206ENST00000484733 MLLT1Q03111 559 aaPredicted RBP14.4□□□□□ -0.1
SCFD1-206ENST00000484733 SPDYE2Q495Y8 402 aa14.4□□□□□ -0.1
SCFD1-206ENST00000484733 LRRC24Q50LG9 513 aa14.4□□□□□ -0.1
SCFD1-206ENST00000484733 CLRN2A0PK11 232 aa14.4□□□□□ -0.11
SCFD1-206ENST00000484733 PDE8BO95263 885 aa14.4□□□□□ -0.11
SCFD1-206ENST00000484733 HDLBPQ00341 1268 aaKnown RBP14.4□□□□□ -0.11
SCFD1-206ENST00000484733 PRKG1Q13976 671 aa14.4□□□□□ -0.11
SCFD1-206ENST00000484733 PKN2Q16513 984 aaKnown RBP14.4□□□□□ -0.11
SCFD1-206ENST00000484733 METTL24Q5JXM2 366 aa14.4□□□□□ -0.11
SCFD1-206ENST00000484733 SLC10A4Q96EP9 437 aa14.4□□□□□ -0.11
SCFD1-206ENST00000484733 ZNF70Q9UC06 446 aaPredicted RBP14.4□□□□□ -0.11
SCFD1-206ENST00000484733 TTF2Q9UNY4 1162 aaKnown RBP14.4□□□□□ -0.11
SCFD1-206ENST00000484733 JAG2Q9Y219 1238 aa14.4□□□□□ -0.11
SCFD1-206ENST00000484733 AOX1Q06278 1338 aa14.39□□□□□ -0.11
SCFD1-206ENST00000484733 MANSC4A6NHS7 340 aaPredicted RBP14.39□□□□□ -0.11
SCFD1-206ENST00000484733 ZBTB48P10074 688 aaPredicted RBP14.39□□□□□ -0.11
SCFD1-206ENST00000484733 RBM5P52756 815 aaKnown RBP eCLIP14.39□□□□□ -0.11
SCFD1-206ENST00000484733 TNFAIP1Q13829 316 aa14.39□□□□□ -0.11
SCFD1-206ENST00000484733 TBC1D22AQ8WUA7 517 aa14.39□□□□□ -0.11
SCFD1-206ENST00000484733 MRIQ9BWK5 157 aa14.39□□□□□ -0.11
SCFD1-206ENST00000484733 TBC1D8O95759 1140 aa14.38□□□□□ -0.11
SCFD1-206ENST00000484733 ALDH1A1P00352 501 aa14.38□□□□□ -0.11
SCFD1-206ENST00000484733 RASA3Q14644 834 aa14.38□□□□□ -0.11
SCFD1-206ENST00000484733 CAVIN4Q5BKX8 364 aa14.38□□□□□ -0.11
SCFD1-206ENST00000484733 NBPF12Q5TAG4 269 aaPredicted RBP14.38□□□□□ -0.11
SCFD1-206ENST00000484733 USP2O75604 605 aaPredicted RBP14.38□□□□□ -0.11
SCFD1-206ENST00000484733 FGFR2P21802 821 aa14.38□□□□□ -0.11
SCFD1-206ENST00000484733 IREB2P48200 963 aaKnown RBP14.38□□□□□ -0.11
SCFD1-206ENST00000484733 WNK4Q96J92 1243 aa14.38□□□□□ -0.11
SCFD1-206ENST00000484733 VEZTQ9HBM0 779 aa14.38□□□□□ -0.11
SCFD1-206ENST00000484733 GPR25O00155 361 aa14.37□□□□□ -0.11
SCFD1-206ENST00000484733 CRKP46108 304 aa14.37□□□□□ -0.11
SCFD1-206ENST00000484733 RFX5P48382 616 aaPredicted RBP14.37□□□□□ -0.11
SCFD1-206ENST00000484733 VPS37DQ86XT2 251 aa14.37□□□□□ -0.11
SCFD1-206ENST00000484733 DZIP1LQ8IYY4 767 aaKnown RBP14.37□□□□□ -0.11
SCFD1-206ENST00000484733 ZNF296Q8WUU4 475 aaPredicted RBP14.37□□□□□ -0.11
SCFD1-206ENST00000484733 SUGT1Q9Y2Z0 365 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms