RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 CCDC85AQ96PX6 553 aaPredicted RBP11.63□□□□□ -0.55
SMC4-213ENST00000472282 BCL2L13Q9BXK5 485 aa11.63□□□□□ -0.55
SMC4-213ENST00000472282 TMX4Q9H1E5 349 aaPredicted RBP11.63□□□□□ -0.55
SMC4-213ENST00000472282 VPS33BQ9H267 617 aa11.63□□□□□ -0.55
SMC4-213ENST00000472282 KIAA1468Q9P260 1216 aa11.63□□□□□ -0.55
SMC4-213ENST00000472282 POLLQ9UGP5 575 aa11.63□□□□□ -0.55
SMC4-213ENST00000472282 NSFL1CQ9UNZ2 370 aaKnown RBP11.63□□□□□ -0.55
SMC4-213ENST00000472282 RAD17O75943 681 aa11.62□□□□□ -0.55
SMC4-213ENST00000472282 HSPA1AP0DMV8 641 aaKnown RBP11.62□□□□□ -0.55
SMC4-213ENST00000472282 HSPA1BP0DMV9 641 aaKnown RBP11.62□□□□□ -0.55
SMC4-213ENST00000472282 LMOD1P29536 600 aaPredicted RBP11.62□□□□□ -0.55
SMC4-213ENST00000472282 GMPSP49915 693 aaPredicted RBP11.62□□□□□ -0.55
SMC4-213ENST00000472282 FLIIQ13045 1269 aa11.62□□□□□ -0.55
SMC4-213ENST00000472282 CWF19L2Q2TBE0 894 aaKnown RBP11.62□□□□□ -0.55
SMC4-213ENST00000472282 KSR2Q6VAB6 950 aa11.62□□□□□ -0.55
SMC4-213ENST00000472282 SSH1Q8WYL5 1049 aa11.62□□□□□ -0.55
SMC4-213ENST00000472282 CWC25Q9NXE8 425 aaPredicted RBP11.62□□□□□ -0.55
SMC4-213ENST00000472282 GPRC5DQ9NZD1 345 aa11.62□□□□□ -0.55
SMC4-213ENST00000472282 CNTNAP1P78357 1384 aa11.62□□□□□ -0.55
SMC4-213ENST00000472282 PDE8AO60658 829 aa11.61□□□□□ -0.55
SMC4-213ENST00000472282 DDX58O95786 925 aaKnown RBP11.61□□□□□ -0.55
SMC4-213ENST00000472282 RPS8P62241 208 aaKnown RBP11.61□□□□□ -0.55
SMC4-213ENST00000472282 COL13A1Q5TAT6 717 aaPredicted RBP11.61□□□□□ -0.55
SMC4-213ENST00000472282 CIAPIN1Q6FI81 312 aa11.61□□□□□ -0.55
SMC4-213ENST00000472282 NYAP1Q6ZVC0 841 aa11.61□□□□□ -0.55
SMC4-213ENST00000472282 TMC4Q7Z404 712 aa11.61□□□□□ -0.55
SMC4-213ENST00000472282 DBNDD1Q9H9R9 158 aa11.61□□□□□ -0.55
SMC4-213ENST00000472282 KCNQ5Q9NR82 932 aa11.61□□□□□ -0.55
SMC4-213ENST00000472282 SMC4Q9NTJ3 1288 aa11.61□□□□□ -0.55
SMC4-213ENST00000472282 CDHR2Q9BYE9 1310 aa11.6□□□□□ -0.55
SMC4-213ENST00000472282 THSD7BQ9C0I4 1608 aa11.6□□□□□ -0.55
SMC4-213ENST00000472282 RTL9Q8NET4 1388 aa11.6□□□□□ -0.55
SMC4-213ENST00000472282 TMEM88BA6NKF7 163 aa11.6□□□□□ -0.55
SMC4-213ENST00000472282 SPDYE16A6NNV3 312 aaPredicted RBP11.6□□□□□ -0.55
SMC4-213ENST00000472282 TRAF5O00463 557 aa11.6□□□□□ -0.55
SMC4-213ENST00000472282 HIRAP54198 1017 aaPredicted RBP11.6□□□□□ -0.55
SMC4-213ENST00000472282 FKBP5Q13451 457 aaPredicted RBP11.6□□□□□ -0.55
SMC4-213ENST00000472282 WASHC4Q2M389 1173 aa11.6□□□□□ -0.55
SMC4-213ENST00000472282 ALDH1L2Q3SY69 923 aa11.6□□□□□ -0.55
SMC4-213ENST00000472282 TBC1D16Q8TBP0 767 aa11.6□□□□□ -0.55
SMC4-213ENST00000472282 DDX12PQ92771 950 aa11.6□□□□□ -0.55
SMC4-213ENST00000472282 SOWAHBA6NEL2 793 aa11.59□□□□□ -0.55
SMC4-213ENST00000472282 WTIPA6NIX2 430 aaPredicted RBP11.59□□□□□ -0.55
SMC4-213ENST00000472282 NEURL1BA8MQ27 555 aa11.59□□□□□ -0.55
SMC4-213ENST00000472282 TRIM6-TRIM34B2RNG4 842 aa11.59□□□□□ -0.55
SMC4-213ENST00000472282 C6orf229H3BNL8 230 aa11.59□□□□□ -0.55
SMC4-213ENST00000472282 RARSP54136 660 aaKnown RBP11.59□□□□□ -0.55
SMC4-213ENST00000472282 USP50Q70EL3 339 aaPredicted RBP11.59□□□□□ -0.55
SMC4-213ENST00000472282 TRPM4Q8TD43 1214 aa11.59□□□□□ -0.55
SMC4-213ENST00000472282 ZFRQ96KR1 1074 aaKnown RBP11.59□□□□□ -0.55
SMC4-213ENST00000472282 ADARB2Q9NS39 739 aaKnown RBP11.59□□□□□ -0.55
SMC4-213ENST00000472282 PSMD14O00487 310 aa11.58□□□□□ -0.56
SMC4-213ENST00000472282 ECE2O60344 883 aa11.58□□□□□ -0.56
SMC4-213ENST00000472282 EGFRP00533 1210 aa11.58□□□□□ -0.56
SMC4-213ENST00000472282 VEGFBP49765 207 aa11.58□□□□□ -0.56
SMC4-213ENST00000472282 CCDC152Q4G0S7 254 aa11.58□□□□□ -0.56
SMC4-213ENST00000472282 TTLL11Q8NHH1 800 aa11.58□□□□□ -0.56
SMC4-213ENST00000472282 GREM2Q9H772 168 aa11.58□□□□□ -0.56
SMC4-213ENST00000472282 F6X3S4 739 aa11.57□□□□□ -0.56
SMC4-213ENST00000472282 H7C1W4 665 aa11.57□□□□□ -0.56
SMC4-213ENST00000472282 UFL1O94874 794 aa11.57□□□□□ -0.56
SMC4-213ENST00000472282 CASP7P55210 303 aa11.57□□□□□ -0.56
SMC4-213ENST00000472282 CTSWP56202 376 aa11.57□□□□□ -0.56
SMC4-213ENST00000472282 NBR1Q14596 966 aa11.57□□□□□ -0.56
SMC4-213ENST00000472282 TNIP1Q15025 636 aa11.57□□□□□ -0.56
SMC4-213ENST00000472282 CST9Q5W186 159 aa11.57□□□□□ -0.56
SMC4-213ENST00000472282 DLK2Q6UY11 383 aa11.57□□□□□ -0.56
SMC4-213ENST00000472282 UBE3BQ7Z3V4 1068 aa11.57□□□□□ -0.56
SMC4-213ENST00000472282 DNAAF4Q8WXU2 420 aa11.57□□□□□ -0.56
SMC4-213ENST00000472282 GLIS2Q9BZE0 524 aaPredicted RBP11.57□□□□□ -0.56
SMC4-213ENST00000472282 PODXL2Q9NZ53 605 aa11.57□□□□□ -0.56
SMC4-213ENST00000472282 CNOT7Q9UIV1 285 aaKnown RBP11.57□□□□□ -0.56
SMC4-213ENST00000472282 PTPRCP08575 1304 aa11.57□□□□□ -0.56
SMC4-213ENST00000472282 KIF16BQ96L93 1317 aa11.57□□□□□ -0.56
SMC4-213ENST00000472282 RASSF10A6NK89 507 aa11.56□□□□□ -0.56
SMC4-213ENST00000472282 MAP3K7O43318 606 aa11.56□□□□□ -0.56
SMC4-213ENST00000472282 BCAR3O75815 825 aa11.56□□□□□ -0.56
SMC4-213ENST00000472282 BCAMP50895 628 aa11.56□□□□□ -0.56
SMC4-213ENST00000472282 NEXNQ0ZGT2 675 aa11.56□□□□□ -0.56
SMC4-213ENST00000472282 SAMD7Q7Z3H4 446 aa11.56□□□□□ -0.56
SMC4-213ENST00000472282 ANKRD18AQ8IVF6 992 aa11.56□□□□□ -0.56
SMC4-213ENST00000472282 WDR70Q9NW82 654 aa11.56□□□□□ -0.56
SMC4-213ENST00000472282 PGAP2Q9UHJ9 254 aa11.56□□□□□ -0.56
SMC4-213ENST00000472282 BRPF1P55201 1214 aaPredicted RBP11.55□□□□□ -0.56
SMC4-213ENST00000472282 GCKRQ14397 625 aa11.55□□□□□ -0.56
SMC4-213ENST00000472282 DEFB115Q30KQ5 88 aa11.55□□□□□ -0.56
SMC4-213ENST00000472282 EYA3Q99504 573 aa11.55□□□□□ -0.56
SMC4-213ENST00000472282 ANKIB1Q9P2G1 1089 aa11.55□□□□□ -0.56
SMC4-213ENST00000472282 SEPT9Q9UHD8 586 aaPredicted RBP11.55□□□□□ -0.56
SMC4-213ENST00000472282 GGA1Q9UJY5 639 aa11.55□□□□□ -0.56
SMC4-213ENST00000472282 ABT1Q9ULW3 272 aaKnown RBP11.55□□□□□ -0.56
SMC4-213ENST00000472282 FOXN1O15353 648 aa11.54□□□□□ -0.56
SMC4-213ENST00000472282 HSP90B1P14625 803 aaKnown RBP11.54□□□□□ -0.56
SMC4-213ENST00000472282 E2F4Q16254 413 aa11.54□□□□□ -0.56
SMC4-213ENST00000472282 TBC1D10BQ4KMP7 808 aaPredicted RBP11.54□□□□□ -0.56
SMC4-213ENST00000472282 PACS2Q86VP3 889 aa11.54□□□□□ -0.56
SMC4-213ENST00000472282 ZC3H12CQ9C0D7 883 aaKnown RBP11.54□□□□□ -0.56
SMC4-213ENST00000472282 NOB1Q9ULX3 412 aaKnown RBP11.54□□□□□ -0.56
SMC4-213ENST00000472282 ASTN2O75129 1339 aaPredicted RBP11.54□□□□□ -0.56
SMC4-213ENST00000472282 XDHP47989 1333 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms