RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 BRF1Q92994 677 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 SGSM3Q96HU1 749 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 VEZTQ9HBM0 779 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 SHTN1A0MZ66 631 aa10.35□□□□□ -0.75
SMARCE1-207ENST00000469334 KLHL33A6NCF5 533 aa10.35□□□□□ -0.75
SMARCE1-207ENST00000469334 FSBPO95073 299 aa10.35□□□□□ -0.75
SMARCE1-207ENST00000469334 TOP1P11387 765 aaKnown RBP10.35□□□□□ -0.75
SMARCE1-207ENST00000469334 ADD1P35611 737 aaKnown RBP10.35□□□□□ -0.75
SMARCE1-207ENST00000469334 PTH1RQ03431 593 aa10.35□□□□□ -0.75
SMARCE1-207ENST00000469334 NCAPHQ15003 741 aa10.35□□□□□ -0.75
SMARCE1-207ENST00000469334 PREPLQ4J6C6 727 aaPredicted RBP10.35□□□□□ -0.75
SMARCE1-207ENST00000469334 SLC4A10Q6U841 1118 aa10.35□□□□□ -0.75
SMARCE1-207ENST00000469334 FMR1NBQ8N0W7 255 aaPredicted RBP10.35□□□□□ -0.75
SMARCE1-207ENST00000469334 LLPHQ9BRT6 129 aaKnown RBP10.35□□□□□ -0.75
SMARCE1-207ENST00000469334 SNRKQ9NRH2 765 aa10.35□□□□□ -0.75
SMARCE1-207ENST00000469334 HMG20BQ9P0W2 317 aa10.35□□□□□ -0.75
SMARCE1-207ENST00000469334 SBNO1A3KN83 1393 aa10.35□□□□□ -0.75
SMARCE1-207ENST00000469334 PTPRMP28827 1452 aa10.35□□□□□ -0.75
SMARCE1-207ENST00000469334 ANKRD65E5RJM6 399 aa10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 NF2P35240 595 aa10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 MRPL12P52815 198 aaKnown RBP10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 SCRN1Q12765 414 aa10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 DPCR1Q3MIW9 517 aa10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 PLEKHO1Q53GL0 409 aaPredicted RBP10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 HSP90AB4PQ58FF6 505 aa10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 SMARCC1Q92922 1105 aaPredicted RBP10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 PNKPQ96T60 521 aa10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 BAG1Q99933 345 aaPredicted RBP10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 SDF4Q9BRK5 362 aa10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 RBM8AQ9Y5S9 174 aaKnown RBP10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 CEP170BQ9Y4F5 1589 aaPredicted RBP10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 CDHR2Q9BYE9 1310 aa10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 SSR1P43307 286 aaKnown RBP10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 UBASH3AP57075 661 aa10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 PIP4K2BP78356 416 aa10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 WHAMMP3Q1A5X7 153 aa10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 RNF217Q8TC41 542 aa10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 RHPN1Q8TCX5 695 aa10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 FAM212AQ96EL1 285 aa10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 XAGE2Q96GT9 111 aa10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 FAXDC2Q96IV6 333 aa10.34□□□□□ -0.75
SMARCE1-207ENST00000469334 FAM83GA6ND36 823 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 H0YHG0 523 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 SARNPP82979 210 aaKnown RBP10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 TOB2Q14106 344 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 POLA2Q14181 598 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 PLCB4Q15147 1175 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 FBXW10Q5XX13 1052 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 B4GALNT4Q76KP1 1039 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 MAP4K1Q92918 833 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 JCADQ9P266 1359 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 DLC1Q96QB1 1528 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 SLC27A2O14975 620 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 SCP2P22307 547 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 KCNA4P22459 653 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 ARHGAP25P42331 645 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 AMPHP49418 695 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 TBX2Q13207 712 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 KRT32Q14532 448 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 ZKSCAN8Q15776 578 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 WLSQ5T9L3 541 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 ADALQ6DHV7 355 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 CPLX2Q6PUV4 134 aaKnown RBP10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 FAM177A1Q8N128 213 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 FAM76AQ8TAV0 307 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 JPH2Q9BR39 696 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 IL1RAPL2Q9NP60 686 aa10.33□□□□□ -0.76
SMARCE1-207ENST00000469334 NPHP4O75161 1426 aaPredicted RBP10.32□□□□□ -0.76
SMARCE1-207ENST00000469334 MAP4K4O95819 1239 aaPredicted RBP10.32□□□□□ -0.76
SMARCE1-207ENST00000469334 SYF2O95926 243 aaKnown RBP10.32□□□□□ -0.76
SMARCE1-207ENST00000469334 SERPINC1P01008 464 aa10.32□□□□□ -0.76
SMARCE1-207ENST00000469334 SLC3A2P08195 630 aaKnown RBP10.32□□□□□ -0.76
SMARCE1-207ENST00000469334 CCDC175P0C221 793 aa10.32□□□□□ -0.76
SMARCE1-207ENST00000469334 CCT5P48643 541 aa10.32□□□□□ -0.76
SMARCE1-207ENST00000469334 VSNL1P62760 191 aa10.32□□□□□ -0.76
SMARCE1-207ENST00000469334 MYL5Q02045 173 aa10.32□□□□□ -0.76
SMARCE1-207ENST00000469334 PPFIA1Q13136 1202 aa10.32□□□□□ -0.76
SMARCE1-207ENST00000469334 NBPF10Q6P3W6 841 aaKnown RBP10.32□□□□□ -0.76
SMARCE1-207ENST00000469334 SMARCC2Q8TAQ2 1214 aa10.32□□□□□ -0.76
SMARCE1-207ENST00000469334 GPATCH3Q96I76 525 aa10.32□□□□□ -0.76
SMARCE1-207ENST00000469334 CRB1P82279 1406 aa10.32□□□□□ -0.76
SMARCE1-207ENST00000469334 CTAGE15A4D2H0 777 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 LRRIQ3A6PVS8 624 aaPredicted RBP10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 F6X3S4 739 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 KIF3BO15066 747 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 KIF5CO60282 957 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 KIAA0754O94854 1291 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 CTAGE8P0CG41 777 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 ME1P48163 572 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 FNTAP49354 379 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 CFAP100Q494V2 611 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 YTHDF3Q7Z739 585 aaKnown RBP10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 CTAGE6Q86UF2 777 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 ARHGEF25Q86VW2 580 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 CTAGE4Q8IX94 777 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 N4BP2L2Q92802 583 aaPredicted RBP10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 ZKSCAN4Q969J2 545 aaPredicted RBP10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 EVI5LQ96CN4 794 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 PAGR1Q9BTK6 254 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 STK31Q9BXU1 1019 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms