RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 TRAPPC6BQ86SZ2 158 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 TGIF2LYQ8IUE0 185 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 MUC20Q8N307 709 aaPredicted RBP8.48□□□□□ -1.05
UPF1-213ENST00000601981 WFDC11Q8NEX6 87 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 OR4C16Q8NGL9 310 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 ZMAT3Q9HA38 289 aaKnown RBP8.48□□□□□ -1.05
UPF1-213ENST00000601981 C1orf123Q9NWV4 160 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 RNF7Q9UBF6 113 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 POLDIP2Q9Y2S7 368 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 NF1P21359 2839 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 IGHV4-30-2A0A087WSY4 118 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 IGKV1-12A0A0C4DH73 117 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 IGHV3-64DA0A0J9YX35 117 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 C7orf66A4D0T2 115 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 MEIS3P1A6NDR6 274 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 FAM90A10PA6NDY2 464 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 FAM90A18PA6NE21 464 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 FAM90A16PA6NEW6 464 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 FAM90A20PA6NIJ5 464 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 FAM90A8PA6NJQ4 464 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 FAM90A7PA6NKC0 464 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 FAM90A22PA8MWA6 464 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 FAM90A12PA8MX19 464 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 FAM90A5PA8MXJ8 464 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 FAM90A23PA8MXZ1 464 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 SSX5O60225 188 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 DHFRP00374 187 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 PLATP00750 562 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 IGKV1D-12P01611 117 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 CD74P04233 296 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 H2AFB2P0C5Z0 115 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 FAM90A15PP0C7V4 464 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 FAM90A13PP0C7W8 464 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 FAM90A14PP0C7W9 464 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 FAM90A24PP0C7X0 464 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 TBPP20226 339 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 USF1P22415 310 aaPredicted RBP8.47□□□□□ -1.05
UPF1-213ENST00000601981 BLVRBP30043 206 aaPredicted RBP8.47□□□□□ -1.05
UPF1-213ENST00000601981 CCR6P51684 374 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 ZNF154Q13106 437 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 MEF2DQ14814 521 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 NHLRC3Q5JS37 347 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 ELP2Q6IA86 826 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 AKAP14Q86UN6 197 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 CALHM1Q8IU99 346 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 KRTAP1-3Q8IUG1 177 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 MKXQ8IYA7 352 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 OSR2Q8N2R0 312 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 SPICQ8N5J4 248 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 OR10Z1Q8NGY1 313 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 OR51F2Q8NH61 342 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 OR56B4Q8NH76 319 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 NUDCD2Q8WVJ2 157 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 ST8SIA4Q92187 359 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 ARHGAP5-AS1Q96IT6 56 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 PECRQ9BY49 303 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 PKIBQ9C010 78 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 BPESC1Q9GZL8 116 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 C20orf85Q9H1P6 137 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 IFT46Q9NQC8 304 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 NUDT15Q9NV35 164 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 MCUBQ9NWR8 336 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 TREM2Q9NZC2 230 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 ELF5Q9UKW6 265 aaPredicted RBP8.47□□□□□ -1.05
UPF1-213ENST00000601981 HSF4Q9ULV5 492 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 KCNK7Q9Y2U2 307 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 NPTNQ9Y639 398 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 ALG5Q9Y673 324 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 CR1P17927 2039 aa8.47□□□□□ -1.05
UPF1-213ENST00000601981 HIVEP1P15822 2718 aa8.46□□□□□ -1.05
UPF1-213ENST00000601981 YLPM1P49750 1951 aaKnown RBP8.46□□□□□ -1.05
UPF1-213ENST00000601981 PPIAL4EA0A075B759 164 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 HMX3A6NHT5 357 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 VWC2LB2RUY7 222 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 ZNF736B4DX44 427 aaPredicted RBP8.46□□□□□ -1.06
UPF1-213ENST00000601981 PPIAL4DF5H284 164 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 TMEM178BH3BS89 294 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 J3QT63 122 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 CDIPTO14735 213 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 NDUFB6O95139 128 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 RAB3DO95716 219 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 CD3DP04234 171 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 HNRNPCP07910 306 aaKnown RBP eCLIP8.46□□□□□ -1.06
UPF1-213ENST00000601981 PPIAL4FP0DN26 164 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 NAT1P18440 290 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 MPZP25189 248 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 MDH2P40926 338 aaKnown RBP8.46□□□□□ -1.06
UPF1-213ENST00000601981 PMELP40967 661 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 HAAOP46952 286 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 RBM11P57052 281 aaKnown RBP8.46□□□□□ -1.06
UPF1-213ENST00000601981 IL24Q13007 206 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 ZMYND11Q15326 602 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 RBMS2Q15434 407 aaKnown RBP8.46□□□□□ -1.06
UPF1-213ENST00000601981 MPPED2Q15777 294 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 ACTBL2Q562R1 376 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 FAM76BQ5HYJ3 339 aa8.46□□□□□ -1.06
UPF1-213ENST00000601981 SFRP4Q6FHJ7 346 aaPredicted RBP8.46□□□□□ -1.06
UPF1-213ENST00000601981 HAGHLQ6PII5 290 aaPredicted RBP8.46□□□□□ -1.06
UPF1-213ENST00000601981 ZNF782Q6ZMW2 699 aaPredicted RBP8.46□□□□□ -1.06
UPF1-213ENST00000601981 SLC25A26Q70HW3 274 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms