RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 CYB5R3P00387 301 aaPredicted RBP9.47□□□□□ -0.89
SEC22B-201ENST00000578049 OR5AL1P0C617 328 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 SMIM17P0DL12 118 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 CXCL2P19875 107 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 DTD1Q8TEA8 209 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 ZNF552Q9H707 407 aaPredicted RBP9.47□□□□□ -0.89
SEC22B-201ENST00000578049 LOXL2Q9Y4K0 774 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 SLX4Q8IY92 1834 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 NDUFB3O43676 98 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 FCGR3BO75015 233 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 SEMA7AO75326 666 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 SP1P08047 785 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 GABRG2P18507 467 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 GZMHP20718 246 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 IFITM2Q01629 132 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 SKP2Q13309 424 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 HIST3H3Q16695 136 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 C1orf100Q5SVJ3 147 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 RHBDD2Q6NTF9 364 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 C10orf111Q8N326 155 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 STARD4Q96DR4 205 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 ZNF576Q9H609 170 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 NPDC1Q9NQX5 325 aaPredicted RBP9.47□□□□□ -0.89
SEC22B-201ENST00000578049 hADV38S2A0JD32 116 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 SOCS1O15524 211 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 ROM1Q03395 351 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 DUSP2Q05923 314 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 ANKRD37Q7Z713 158 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 ZNF383Q8NA42 475 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 MRPL30Q8TCC3 161 aaKnown RBP9.47□□□□□ -0.89
SEC22B-201ENST00000578049 HSD17B10Q99714 261 aaKnown RBP9.47□□□□□ -0.89
SEC22B-201ENST00000578049 KIF13AQ9H1H9 1805 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 CT62P0C5K7 136 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 ZP4Q12836 540 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 OTPQ5XKR4 325 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 LHX8Q68G74 356 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 DEFB108BQ8NET1 73 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 AQP10Q96PS8 301 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 RCC2Q9P258 522 aaKnown RBP9.47□□□□□ -0.89
SEC22B-201ENST00000578049 CDC42EP3Q9UKI2 254 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 OR2W1Q9Y3N9 320 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 A0A1B0GTQ1 180 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 FAM90A10PA6NDY2 464 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 FAM90A18PA6NE21 464 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 FAM90A16PA6NEW6 464 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 OR2T8A6NH00 312 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 FAM90A20PA6NIJ5 464 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 FAM90A8PA6NJQ4 464 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 FAM90A7PA6NKC0 464 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 FAM90A22PA8MWA6 464 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 FAM90A12PA8MX19 464 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 FAM90A5PA8MXJ8 464 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 FAM90A23PA8MXZ1 464 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 BGLAPP02818 100 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 FAM90A15PP0C7V4 464 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 FAM90A13PP0C7W8 464 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 FAM90A14PP0C7W9 464 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 FAM90A24PP0C7X0 464 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 SRP14P37108 136 aaKnown RBP9.47□□□□□ -0.89
SEC22B-201ENST00000578049 EIF4EBP2Q13542 120 aaPredicted RBP9.47□□□□□ -0.89
SEC22B-201ENST00000578049 PUSL1Q8N0Z8 303 aaKnown RBP9.47□□□□□ -0.89
SEC22B-201ENST00000578049 OR2V2Q96R30 315 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 RSRP1Q9BUV0 290 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 SARGQ9BW04 601 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 FER1L6Q2WGJ9 1857 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 IGHV1OR21-1A0A087WYE8 117 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 IGHV3-15A0A0B4J1V0 119 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 TRAV17A0A0B4J275 112 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 NCBP2LA6PVI3 153 aaKnown RBP9.47□□□□□ -0.89
SEC22B-201ENST00000578049 J3QT63 122 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 ATP6V0CP27449 155 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 YBX1P67809 324 aaKnown RBP9.47□□□□□ -0.89
SEC22B-201ENST00000578049 EIF4E3Q8N5X7 224 aaKnown RBP9.47□□□□□ -0.89
SEC22B-201ENST00000578049 GABRG3Q99928 467 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 TUBD1Q9UJT1 453 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 ATP23Q9Y6H3 246 aa9.47□□□□□ -0.89
SEC22B-201ENST00000578049 A0A1W2PPC1 479 aa9.46□□□□□ -0.89
SEC22B-201ENST00000578049 IGSF23A1L1A6 192 aa9.46□□□□□ -0.89
SEC22B-201ENST00000578049 CCL11P51671 97 aa9.46□□□□□ -0.89
SEC22B-201ENST00000578049 ERVS71-1P61550 626 aa9.46□□□□□ -0.89
SEC22B-201ENST00000578049 UBE2L3P68036 154 aaKnown RBP9.46□□□□□ -0.89
SEC22B-201ENST00000578049 OR2D2Q9H210 308 aa9.46□□□□□ -0.89
SEC22B-201ENST00000578049 CYR61O00622 381 aa9.46□□□□□ -0.89
SEC22B-201ENST00000578049 OR2A4O95047 310 aa9.46□□□□□ -0.89
SEC22B-201ENST00000578049 UBALD2Q8IYN6 164 aa9.46□□□□□ -0.89
SEC22B-201ENST00000578049 OR2A7Q96R45 310 aa9.46□□□□□ -0.89
SEC22B-201ENST00000578049 DEFB127Q9H1M4 99 aa9.46□□□□□ -0.89
SEC22B-201ENST00000578049 SLC26A1Q9H2B4 701 aa9.46□□□□□ -0.89
SEC22B-201ENST00000578049 PSG11Q9UQ72 335 aa9.46□□□□□ -0.89
SEC22B-201ENST00000578049 OOEPA6NGQ2 149 aa9.46□□□□□ -0.9
SEC22B-201ENST00000578049 ISLRO14498 428 aa9.46□□□□□ -0.9
SEC22B-201ENST00000578049 CXorf1O96002 111 aa9.46□□□□□ -0.9
SEC22B-201ENST00000578049 BCL3P20749 454 aa9.46□□□□□ -0.9
SEC22B-201ENST00000578049 RIGQ13278 110 aa9.46□□□□□ -0.9
SEC22B-201ENST00000578049 NHLRC3Q5JS37 347 aa9.46□□□□□ -0.9
SEC22B-201ENST00000578049 OR2M7Q8NG81 312 aa9.46□□□□□ -0.9
SEC22B-201ENST00000578049 SIPA1L3O60292 1781 aaPredicted RBP9.46□□□□□ -0.9
SEC22B-201ENST00000578049 PQLC2LA1A4F0 135 aa9.46□□□□□ -0.9
SEC22B-201ENST00000578049 M0QZ24 198 aa9.46□□□□□ -0.9
SEC22B-201ENST00000578049 M0R2Z0 102 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms