RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 HHLA2Q9UM44 414 aa12.15□□□□□ -0.46
CTNS-209ENST00000574776 ZNF281Q9Y2X9 895 aa12.15□□□□□ -0.46
CTNS-209ENST00000574776 DNAH3Q8TD57 4116 aa12.14□□□□□ -0.47
CTNS-209ENST00000574776 BUB1B-PAK6H3BSN5 160 aa12.14□□□□□ -0.47
CTNS-209ENST00000574776 DEGS1O15121 323 aa12.14□□□□□ -0.47
CTNS-209ENST00000574776 MT-ND2P03891 347 aa12.14□□□□□ -0.47
CTNS-209ENST00000574776 CCR9P51686 369 aa12.14□□□□□ -0.47
CTNS-209ENST00000574776 PRRX1P54821 245 aa12.14□□□□□ -0.47
CTNS-209ENST00000574776 KRBOX4Q5JUW0 171 aa12.14□□□□□ -0.47
CTNS-209ENST00000574776 UTF1Q5T230 341 aa12.14□□□□□ -0.47
CTNS-209ENST00000574776 Q6P435 159 aa12.14□□□□□ -0.47
CTNS-209ENST00000574776 OR4D6Q8NGJ1 314 aa12.14□□□□□ -0.47
CTNS-209ENST00000574776 MYDGFQ969H8 173 aa12.14□□□□□ -0.47
CTNS-209ENST00000574776 RBM14Q96PK6 669 aaKnown RBP12.14□□□□□ -0.47
CTNS-209ENST00000574776 AASSQ9UDR5 926 aa12.14□□□□□ -0.47
CTNS-209ENST00000574776 PCDHGB5Q9Y5G0 923 aa12.14□□□□□ -0.47
CTNS-209ENST00000574776 TSSC4Q9Y5U2 329 aaPredicted RBP12.14□□□□□ -0.47
CTNS-209ENST00000574776 ODAMA1E959 279 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 OR4C45A6NMZ5 311 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 LY6LH3BQJ8 138 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 SLC33A1O00400 549 aaPredicted RBP12.13□□□□□ -0.47
CTNS-209ENST00000574776 OR2F2O95006 317 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 MPIG6BO95866 241 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 AMY1AP04745 511 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 AMY2AP04746 511 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 TMEM225BP0DP42 221 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 CD34P28906 385 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 CEACAM3P40198 252 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 PTGFRP43088 359 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 OR3A4PP47883 348 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 ARHGDIBP52566 201 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 RBM39Q14498 530 aaKnown RBP12.13□□□□□ -0.47
CTNS-209ENST00000574776 HLA-DRB5Q30154 266 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 ZIK1Q3SY52 487 aaPredicted RBP12.13□□□□□ -0.47
CTNS-209ENST00000574776 TPTE2P1Q5T6R2 138 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 C10orf99Q6UWK7 81 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 SAXO1Q8IYX7 474 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 ACBD7Q8N6N7 88 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 PELI1Q96FA3 418 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 COQ2Q96H96 371 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 HRASLS5Q96KN8 279 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 C4orf36Q96KX1 117 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 ZCCHC4Q9H5U6 513 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 FAM53CQ9NYF3 392 aa12.13□□□□□ -0.47
CTNS-209ENST00000574776 DYNC1I1O14576 645 aa12.12□□□□□ -0.47
CTNS-209ENST00000574776 ATP5HO75947 161 aa12.12□□□□□ -0.47
CTNS-209ENST00000574776 PF4P02776 101 aa12.12□□□□□ -0.47
CTNS-209ENST00000574776 NFYBP25208 207 aa12.12□□□□□ -0.47
CTNS-209ENST00000574776 SNRPGP62308 76 aaKnown RBP12.12□□□□□ -0.47
CTNS-209ENST00000574776 ALKBH1Q13686 389 aaKnown RBP12.12□□□□□ -0.47
CTNS-209ENST00000574776 ATXN7L3Q14CW9 347 aaPredicted RBP12.12□□□□□ -0.47
CTNS-209ENST00000574776 CDK5R1Q15078 307 aa12.12□□□□□ -0.47
CTNS-209ENST00000574776 C17orf58Q2M2W7 97 aa12.12□□□□□ -0.47
CTNS-209ENST00000574776 C9orf152Q5JTZ5 239 aa12.12□□□□□ -0.47
CTNS-209ENST00000574776 SLC25A30Q5SVS4 291 aa12.12□□□□□ -0.47
CTNS-209ENST00000574776 MEDAGQ5VYS4 303 aa12.12□□□□□ -0.47
CTNS-209ENST00000574776 LHFPL3Q86UP9 236 aa12.12□□□□□ -0.47
CTNS-209ENST00000574776 CHST4Q8NCG5 386 aa12.12□□□□□ -0.47
CTNS-209ENST00000574776 CREB3L1Q96BA8 519 aa12.12□□□□□ -0.47
CTNS-209ENST00000574776 PPIL3Q9H2H8 161 aaKnown RBP12.12□□□□□ -0.47
CTNS-209ENST00000574776 RHOFQ9HBH0 211 aa12.12□□□□□ -0.47
CTNS-209ENST00000574776 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.12□□□□□ -0.47
CTNS-209ENST00000574776 EXOGQ9Y2C4 368 aaKnown RBP12.12□□□□□ -0.47
CTNS-209ENST00000574776 MYRFQ9Y2G1 1151 aa12.12□□□□□ -0.47
CTNS-209ENST00000574776 ZNF729A6NN14 1252 aaPredicted RBP12.11□□□□□ -0.47
CTNS-209ENST00000574776 ALPLP05186 524 aa12.11□□□□□ -0.47
CTNS-209ENST00000574776 CSN2P05814 226 aa12.11□□□□□ -0.47
CTNS-209ENST00000574776 HCKP08631 526 aa12.11□□□□□ -0.47
CTNS-209ENST00000574776 OR4X2Q8NGF9 303 aa12.11□□□□□ -0.47
CTNS-209ENST00000574776 PYDC1Q8WXC3 89 aa12.11□□□□□ -0.47
CTNS-209ENST00000574776 LGALS12Q96DT0 336 aa12.11□□□□□ -0.47
CTNS-209ENST00000574776 NR1H4Q96RI1 486 aaPredicted RBP12.11□□□□□ -0.47
CTNS-209ENST00000574776 ISG20L2Q9H9L3 353 aaKnown RBP12.11□□□□□ -0.47
CTNS-209ENST00000574776 ORC6Q9Y5N6 252 aa12.11□□□□□ -0.47
CTNS-209ENST00000574776 A0A087X0M5 115 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 KBTBD11-OT1A0A1B0GTJ5 212 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 A0A1B0GX30 115 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 HSPB6O14558 160 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 CIB2O75838 187 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 IGHV3-7P01780 117 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 FAM106CPP0CH98 169 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 CGB3P0DN86 165 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 CGB7P0DN87 165 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 MNDAP41218 407 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 ZP1P60852 638 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 KISS1Q15726 138 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 KHDC1LQ5JSQ8 128 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 CCDC144NLQ6NUI1 221 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 SERPINA12Q8IW75 414 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 ZNF565Q8N9K5 539 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 OR5D14Q8NGL3 314 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 OR9G1Q8NH87 305 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 LEAP2Q969E1 77 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 ALG8Q9BVK2 526 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 INPP5EQ9NRR6 644 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 OR6C3Q9NZP0 311 aa12.1□□□□□ -0.47
CTNS-209ENST00000574776 SNTNA6NMZ2 147 aa12.09□□□□□ -0.47
CTNS-209ENST00000574776 OOSP1A8MZH6 123 aa12.09□□□□□ -0.47
CTNS-209ENST00000574776 E9PI62 339 aa12.09□□□□□ -0.47
CTNS-209ENST00000574776 E9PQ18 207 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms