RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 SELENOIQ9C0D9 397 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 MS4A7Q9GZW8 240 aaPredicted RBP2.91□□□□□ -1.94
SEC23A-207ENST00000554615 OR14J1Q9UGF5 321 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 XIRP2A4UGR9 3374 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.91□□□□□ -1.94
SEC23A-207ENST00000554615 SLC33A1O00400 549 aaPredicted RBP2.91□□□□□ -1.94
SEC23A-207ENST00000554615 ARPC5O15511 151 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 GATCO43716 136 aaKnown RBP2.91□□□□□ -1.94
SEC23A-207ENST00000554615 SIX6O95475 246 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 IL18BPO95998 194 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 SP9P0CG40 484 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 EPHA1P21709 976 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 EMP2P54851 167 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 YPEL3P61236 119 aaPredicted RBP2.91□□□□□ -1.94
SEC23A-207ENST00000554615 IL13RA1P78552 427 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 HLA-DRB3P79483 266 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 DEFB110Q30KQ9 67 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 ZNF718Q3SXZ3 478 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 TEX36Q5VZQ5 186 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 SPNS3Q6ZMD2 512 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 Q8IYB0 196 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 OSR2Q8N2R0 312 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 ARL6IP6Q8N6S5 226 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 CSNK2A3Q8NEV1 391 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 OR1K1Q8NGR3 316 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 OR6K6Q8NGW6 343 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 WIPF2Q8TF74 440 aaPredicted RBP2.91□□□□□ -1.94
SEC23A-207ENST00000554615 SMIM12Q96EX1 92 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 ALKBH3Q96Q83 286 aaPredicted RBP2.91□□□□□ -1.94
SEC23A-207ENST00000554615 TCEAL7Q9BRU2 100 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 METTL9Q9H1A3 318 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 PRDM13Q9H4Q3 707 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 PCDHB16Q9NRJ7 776 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 FBXL17Q9UF56 701 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 IKZF2Q9UKS7 526 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 RNF150Q9ULK6 438 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 MRPS17Q9Y2R5 130 aaKnown RBP2.91□□□□□ -1.94
SEC23A-207ENST00000554615 DMRT1Q9Y5R6 373 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 DOCK10Q96BY6 2186 aa2.91□□□□□ -1.94
SEC23A-207ENST00000554615 HCFC1P51610 2035 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 IGLV3-9A0A075B6K5 115 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 TRBV11-1A0A0K0K1C0 115 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 A0A1B0GVT2 93 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 TMEM250H0YL14 139 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 I3L521 148 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 HTR3BO95264 441 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 IGKV1-5P01602 117 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 CCL3P10147 92 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 PTAFRP25105 342 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 RPL12P30050 165 aaKnown RBP2.9□□□□□ -1.94
SEC23A-207ENST00000554615 VDAC2P45880 294 aaPredicted RBP2.9□□□□□ -1.94
SEC23A-207ENST00000554615 EWSR1Q01844 656 aaKnown RBP eCLIP2.9□□□□□ -1.94
SEC23A-207ENST00000554615 OR7A5Q15622 319 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 ATP6V1FQ16864 119 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 ACTL10Q5JWF8 245 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 OR52W1Q6IF63 320 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 ARMC6Q6NXE6 501 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 TRAT1Q6PIZ9 186 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.9□□□□□ -1.94
SEC23A-207ENST00000554615 CHST4Q8NCG5 386 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 OR51L1Q8NGJ5 315 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 OR10G9Q8NGN4 311 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 DVL3Q92997 716 aaPredicted RBP2.9□□□□□ -1.94
SEC23A-207ENST00000554615 CMBLQ96DG6 245 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 WDYHV1Q96HA8 205 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 KIRREL1Q96J84 757 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 IP6K3Q96PC2 410 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 ATP5SQ99766 215 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 ZNF251Q9BRH9 671 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 ARL6Q9H0F7 186 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 CALHM2Q9HA72 323 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 PARPBPQ9NWS1 579 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 RDH8Q9NYR8 311 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 MTCH1Q9NZJ7 389 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 SPEF1Q9Y4P9 236 aa2.9□□□□□ -1.94
SEC23A-207ENST00000554615 M0R135 149 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 TP53I11O14683 189 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 RER1O15258 196 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 PPYP01298 95 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 IFNA10P01566 189 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 SFTA3P0C7M3 94 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 FUT3P21217 361 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 AVPR2P30518 371 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 OR1D4P47884 311 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 MEOX2P50222 304 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 ZNF41P51814 821 aaPredicted RBP2.9□□□□□ -1.95
SEC23A-207ENST00000554615 SNU13P55769 128 aaKnown RBP2.9□□□□□ -1.95
SEC23A-207ENST00000554615 TMEM33P57088 247 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 CLINT1Q14677 625 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 OR2A2Q6IF42 318 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 ALKAL2Q6UX46 152 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 SLC25A26Q70HW3 274 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 LINC00311Q8N616 119 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 BEND2Q8NDZ0 799 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 LMX1AQ8TE12 382 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 SPTSSAQ969W0 71 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 ZNF799Q96GE5 643 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 ZNF576Q9H609 170 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 PLEKHF2Q9H8W4 249 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 SDF2L1Q9HCN8 221 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms