RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 RIMS4Q9H426 269 aaPredicted RBP16.38■□□□□ 0.21
SKP2-208ENST00000546211 ZNF286AQ9HBT8 521 aa16.38■□□□□ 0.21
SKP2-208ENST00000546211 DECR2Q9NUI1 292 aa16.38■□□□□ 0.21
SKP2-208ENST00000546211 SLC2A8Q9NY64 477 aa16.38■□□□□ 0.21
SKP2-208ENST00000546211 RNF7Q9UBF6 113 aa16.38■□□□□ 0.21
SKP2-208ENST00000546211 DIDO1Q9BTC0 2240 aaKnown RBP16.38■□□□□ 0.21
SKP2-208ENST00000546211 SLC33A1O00400 549 aaPredicted RBP16.38■□□□□ 0.21
SKP2-208ENST00000546211 MDH2P40926 338 aaKnown RBP16.38■□□□□ 0.21
SKP2-208ENST00000546211 CCL8P80075 99 aa16.38■□□□□ 0.21
SKP2-208ENST00000546211 MUC15Q8N387 334 aa16.38■□□□□ 0.21
SKP2-208ENST00000546211 ARRDC1Q8N5I2 433 aa16.38■□□□□ 0.21
SKP2-208ENST00000546211 GCSAMQ8N6F7 178 aa16.38■□□□□ 0.21
SKP2-208ENST00000546211 BOLLQ8N9W6 283 aaKnown RBP16.38■□□□□ 0.21
SKP2-208ENST00000546211 Q8TCH9 128 aa16.38■□□□□ 0.21
SKP2-208ENST00000546211 FAM222BQ8WU58 562 aa16.38■□□□□ 0.21
SKP2-208ENST00000546211 DNAJB11Q9UBS4 358 aa16.38■□□□□ 0.21
SKP2-208ENST00000546211 ANXA10Q9UJ72 324 aa16.38■□□□□ 0.21
SKP2-208ENST00000546211 PPP1R3CQ9UQK1 317 aa16.38■□□□□ 0.21
SKP2-208ENST00000546211 NPTNQ9Y639 398 aa16.38■□□□□ 0.21
SKP2-208ENST00000546211 KALRNO60229 2985 aa16.38■□□□□ 0.21
SKP2-208ENST00000546211 ARPC1BO15143 372 aaKnown RBP16.37■□□□□ 0.21
SKP2-208ENST00000546211 C1QL1O75973 258 aa16.37■□□□□ 0.21
SKP2-208ENST00000546211 IRF2P14316 349 aa16.37■□□□□ 0.21
SKP2-208ENST00000546211 EGR1P18146 543 aa16.37■□□□□ 0.21
SKP2-208ENST00000546211 AGAP6Q5VW22 663 aa16.37■□□□□ 0.21
SKP2-208ENST00000546211 TMEM17Q86X19 198 aa16.37■□□□□ 0.21
SKP2-208ENST00000546211 SLC25A21Q9BQT8 299 aaPredicted RBP16.37■□□□□ 0.21
SKP2-208ENST00000546211 ALG5Q9Y673 324 aa16.37■□□□□ 0.21
SKP2-208ENST00000546211 A0A0B4J293 547 aa16.36■□□□□ 0.21
SKP2-208ENST00000546211 IFNL4K9M1U5 179 aa16.36■□□□□ 0.21
SKP2-208ENST00000546211 PEX14O75381 377 aa16.36■□□□□ 0.21
SKP2-208ENST00000546211 NAPSAO96009 420 aa16.36■□□□□ 0.21
SKP2-208ENST00000546211 TSPAN5P62079 268 aa16.36■□□□□ 0.21
SKP2-208ENST00000546211 SNRPD2P62316 118 aaKnown RBP16.36■□□□□ 0.21
SKP2-208ENST00000546211 CDK10Q15131 360 aa16.36■□□□□ 0.21
SKP2-208ENST00000546211 CARTPTQ16568 116 aa16.36■□□□□ 0.21
SKP2-208ENST00000546211 MST1LQ2TV78 715 aa16.36■□□□□ 0.21
SKP2-208ENST00000546211 SHEQ5VZ18 495 aa16.36■□□□□ 0.21
SKP2-208ENST00000546211 ZCCHC24Q8N2G6 241 aaKnown RBP16.36■□□□□ 0.21
SKP2-208ENST00000546211 HPS1Q92902 700 aa16.36■□□□□ 0.21
SKP2-208ENST00000546211 PPA2Q9H2U2 334 aa16.36■□□□□ 0.21
SKP2-208ENST00000546211 SAP30LQ9HAJ7 183 aa16.36■□□□□ 0.21
SKP2-208ENST00000546211 EHFQ9NZC4 300 aa16.36■□□□□ 0.21
SKP2-208ENST00000546211 FLVCR2Q9UPI3 526 aa16.36■□□□□ 0.21
SKP2-208ENST00000546211 WIPI2Q9Y4P8 454 aa16.36■□□□□ 0.21
SKP2-208ENST00000546211 IGKV1D-8A0A087WSZ0 117 aa16.35■□□□□ 0.21
SKP2-208ENST00000546211 RFPL4AA6NLU0 287 aa16.35■□□□□ 0.21
SKP2-208ENST00000546211 RFPL4AL1F8VTS6 287 aa16.35■□□□□ 0.21
SKP2-208ENST00000546211 H7C1Q1 480 aa16.35■□□□□ 0.21
SKP2-208ENST00000546211 LHBP01229 141 aa16.35■□□□□ 0.21
SKP2-208ENST00000546211 LMO1P25800 156 aa16.35■□□□□ 0.21
SKP2-208ENST00000546211 CEBPDP49716 269 aaPredicted RBP16.35■□□□□ 0.21
SKP2-208ENST00000546211 HOXA4Q00056 320 aaPredicted RBP16.35■□□□□ 0.21
SKP2-208ENST00000546211 SRSF7Q16629 238 aaKnown RBP eCLIP16.35■□□□□ 0.21
SKP2-208ENST00000546211 TREM2Q9NZC2 230 aa16.35■□□□□ 0.21
SKP2-208ENST00000546211 HIVEP3Q5T1R4 2406 aa16.35■□□□□ 0.21
SKP2-208ENST00000546211 LRRC30A6NM36 301 aa16.34■□□□□ 0.21
SKP2-208ENST00000546211 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.34■□□□□ 0.21
SKP2-208ENST00000546211 PRAF2O60831 178 aa16.34■□□□□ 0.21
SKP2-208ENST00000546211 GRK1Q15835 563 aa16.34■□□□□ 0.21
SKP2-208ENST00000546211 SWI5Q1ZZU3 235 aa16.34■□□□□ 0.21
SKP2-208ENST00000546211 Q6ZS49 121 aa16.34■□□□□ 0.21
SKP2-208ENST00000546211 OVCH2Q7RTZ1 564 aa16.34■□□□□ 0.21
SKP2-208ENST00000546211 TMEM165Q9HC07 324 aa16.34■□□□□ 0.21
SKP2-208ENST00000546211 Q9N2K0 584 aa16.34■□□□□ 0.21
SKP2-208ENST00000546211 NECAP2Q9NVZ3 263 aa16.34■□□□□ 0.21
SKP2-208ENST00000546211 TRBV6-6A0A0A6YYG2 114 aa16.34■□□□□ 0.21
SKP2-208ENST00000546211 OR2AT4A6NND4 320 aa16.34■□□□□ 0.21
SKP2-208ENST00000546211 PYCARD-AS1I3L0S3 204 aa16.34■□□□□ 0.21
SKP2-208ENST00000546211 C19orf84I3L1E1 186 aa16.34■□□□□ 0.21
SKP2-208ENST00000546211 SDCBPO00560 298 aaPredicted RBP16.34■□□□□ 0.21
SKP2-208ENST00000546211 RLN1P04808 185 aa16.34■□□□□ 0.21
SKP2-208ENST00000546211 PSG2P11465 335 aa16.34■□□□□ 0.21
SKP2-208ENST00000546211 PRDX2P32119 198 aa16.34■□□□□ 0.21
SKP2-208ENST00000546211 OR13C8Q8NGS7 320 aa16.34■□□□□ 0.21
SKP2-208ENST00000546211 MRPL30Q8TCC3 161 aaKnown RBP16.34■□□□□ 0.21
SKP2-208ENST00000546211 GIMAP1Q8WWP7 306 aa16.34■□□□□ 0.21
SKP2-208ENST00000546211 SEBOXQ9HB31 216 aaPredicted RBP16.34■□□□□ 0.21
SKP2-208ENST00000546211 RELNP78509 3460 aa16.33■□□□□ 0.2
SKP2-208ENST00000546211 POM121CA8CG34 1229 aa16.33■□□□□ 0.2
SKP2-208ENST00000546211 CYB5R3P00387 301 aaPredicted RBP16.33■□□□□ 0.2
SKP2-208ENST00000546211 IGFBP2P18065 325 aa16.33■□□□□ 0.2
SKP2-208ENST00000546211 CD80P33681 288 aa16.33■□□□□ 0.2
SKP2-208ENST00000546211 KCNJ3P48549 501 aa16.33■□□□□ 0.2
SKP2-208ENST00000546211 COL10A1Q03692 680 aa16.33■□□□□ 0.2
SKP2-208ENST00000546211 ATXN7L3Q14CW9 347 aaPredicted RBP16.33■□□□□ 0.2
SKP2-208ENST00000546211 OR5T2Q8NGG2 359 aa16.33■□□□□ 0.2
SKP2-208ENST00000546211 TERB2Q8NHR7 220 aa16.33■□□□□ 0.2
SKP2-208ENST00000546211 CHAC2Q8WUX2 184 aa16.33■□□□□ 0.2
SKP2-208ENST00000546211 DACT3Q96B18 629 aaPredicted RBP16.33■□□□□ 0.2
SKP2-208ENST00000546211 BEX2Q9BXY8 128 aa16.33■□□□□ 0.2
SKP2-208ENST00000546211 BEX1Q9HBH7 125 aa16.33■□□□□ 0.2
SKP2-208ENST00000546211 FBXO9Q9UK97 447 aaPredicted RBP16.33■□□□□ 0.2
SKP2-208ENST00000546211 IGHV3OR15-7A0A075B7D8 119 aa16.32■□□□□ 0.2
SKP2-208ENST00000546211 KIR2DS1A0A191URI9 304 aa16.32■□□□□ 0.2
SKP2-208ENST00000546211 TMEM82A0PJX8 343 aa16.32■□□□□ 0.2
SKP2-208ENST00000546211 PSPNO60542 156 aa16.32■□□□□ 0.2
SKP2-208ENST00000546211 RBMXP38159 391 aaKnown RBP16.32■□□□□ 0.2
SKP2-208ENST00000546211 KIR2DS4P43632 304 aa16.32■□□□□ 0.2
SKP2-208ENST00000546211 MECP2P51608 486 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms