RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 RBM11P57052 281 aaKnown RBP11.95□□□□□ -0.5
CPSF1-206ENST00000531480 QRFPP83859 136 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 PAX5Q02548 391 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 SPCS2Q15005 226 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 CR1LQ2VPA4 569 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 FAM120AOSQ5T036 256 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 AWAT2Q6E213 333 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 NR2C2APQ86WQ0 139 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 OR8H2Q8N162 312 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 OSR2Q8N2R0 312 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 OR6M1Q8NGM8 313 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 OR10K1Q8NGX5 313 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 ST8SIA4Q92187 359 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 NUDT16L1Q9BRJ7 211 aaKnown RBP11.95□□□□□ -0.5
CPSF1-206ENST00000531480 RABL2AQ9UBK7 228 aaPredicted RBP11.95□□□□□ -0.5
CPSF1-206ENST00000531480 FBLN5Q9UBX5 448 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 GLS2Q9UI32 602 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 ING4Q9UNL4 249 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 RABL2BQ9UNT1 228 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 AK6Q9Y3D8 172 aaKnown RBP11.95□□□□□ -0.5
CPSF1-206ENST00000531480 V9GY05 133 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 A0A075B6Q4 140 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 A0A0G2JK05 382 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 A0A1W2PP11 408 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 FAM90A10PA6NDY2 464 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 FAM90A18PA6NE21 464 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 FAM90A16PA6NEW6 464 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 FAM90A20PA6NIJ5 464 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 FAM90A8PA6NJQ4 464 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 FAM90A7PA6NKC0 464 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 NOTOA8MTQ0 251 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 FAM90A22PA8MWA6 464 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 FAM90A12PA8MX19 464 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 FAM90A5PA8MXJ8 464 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 FAM90A23PA8MXZ1 464 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 HTR3BO95264 441 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 FAM90A15PP0C7V4 464 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 FAM90A13PP0C7W8 464 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 FAM90A14PP0C7W9 464 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 FAM90A24PP0C7X0 464 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 VSIG8P0DPA2 414 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 CALCBP10092 127 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 MMP9P14780 707 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 HTR2CP28335 458 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 DUSP1P28562 367 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 ERP29P30040 261 aaKnown RBP11.94□□□□□ -0.5
CPSF1-206ENST00000531480 SCAND1P57086 179 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 MPV17LQ2QL34 196 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 PIGYQ3MUY2 71 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 SLC22A6Q4U2R8 563 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 KIR3DL3Q8N743 410 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 TMEM104Q8NE00 496 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 TMEM185AQ8NFB2 350 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 OR5D13Q8NGL4 314 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 NDNFQ8TB73 568 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 S100A13Q99584 98 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 ABRACLQ9P1F3 81 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 LPAR3Q9UBY5 353 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 CDC42EP3Q9UKI2 254 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 ST3GAL6Q9Y274 331 aa11.94□□□□□ -0.5
CPSF1-206ENST00000531480 TRAV24A0A0B4J272 114 aa11.93□□□□□ -0.5
CPSF1-206ENST00000531480 TMEM14DPA8MWL7 114 aa11.93□□□□□ -0.5
CPSF1-206ENST00000531480 SLC33A1O00400 549 aaPredicted RBP11.93□□□□□ -0.5
CPSF1-206ENST00000531480 LDLRAD4O15165 306 aa11.93□□□□□ -0.5
CPSF1-206ENST00000531480 CRLF1O75462 422 aa11.93□□□□□ -0.5
CPSF1-206ENST00000531480 BPNT1O95861 308 aa11.93□□□□□ -0.5
CPSF1-206ENST00000531480 CSTBP04080 98 aaKnown RBP11.93□□□□□ -0.5
CPSF1-206ENST00000531480 SERPINA2P20848 420 aa11.93□□□□□ -0.5
CPSF1-206ENST00000531480 RPS19P39019 145 aaKnown RBP11.93□□□□□ -0.5
CPSF1-206ENST00000531480 OR3A1P47881 315 aa11.93□□□□□ -0.5
CPSF1-206ENST00000531480 FAHD2BQ6P2I3 314 aaPredicted RBP11.93□□□□□ -0.5
CPSF1-206ENST00000531480 BTNL3Q6UXE8 466 aa11.93□□□□□ -0.5
CPSF1-206ENST00000531480 C1orf122Q6ZSJ8 110 aa11.93□□□□□ -0.5
CPSF1-206ENST00000531480 FAHD2AQ96GK7 314 aa11.93□□□□□ -0.5
CPSF1-206ENST00000531480 Q96M66 194 aa11.93□□□□□ -0.5
CPSF1-206ENST00000531480 CMTM3Q96MX0 182 aa11.93□□□□□ -0.5
CPSF1-206ENST00000531480 SIRPDQ9H106 197 aa11.93□□□□□ -0.5
CPSF1-206ENST00000531480 ELL3Q9HB65 397 aaPredicted RBP11.93□□□□□ -0.5
CPSF1-206ENST00000531480 RCC2Q9P258 522 aaKnown RBP11.93□□□□□ -0.5
CPSF1-206ENST00000531480 IFITM5A6NNB3 132 aa11.92□□□□□ -0.5
CPSF1-206ENST00000531480 MGST3O14880 152 aa11.92□□□□□ -0.5
CPSF1-206ENST00000531480 GEMIN2O14893 280 aaKnown RBP11.92□□□□□ -0.5
CPSF1-206ENST00000531480 MGMTP16455 207 aa11.92□□□□□ -0.5
CPSF1-206ENST00000531480 NDUFB7P17568 137 aa11.92□□□□□ -0.5
CPSF1-206ENST00000531480 TALDO1P37837 337 aa11.92□□□□□ -0.5
CPSF1-206ENST00000531480 MXD1Q05195 221 aa11.92□□□□□ -0.5
CPSF1-206ENST00000531480 UNC119Q13432 240 aa11.92□□□□□ -0.5
CPSF1-206ENST00000531480 SPANXN2Q5MJ10 180 aa11.92□□□□□ -0.5
CPSF1-206ENST00000531480 OR2W3Q7Z3T1 314 aa11.92□□□□□ -0.5
CPSF1-206ENST00000531480 TEX29Q8N6K0 151 aa11.92□□□□□ -0.5
CPSF1-206ENST00000531480 ASCC1Q8N9N2 400 aaKnown RBP11.92□□□□□ -0.5
CPSF1-206ENST00000531480 OR4S1Q8NGB4 309 aa11.92□□□□□ -0.5
CPSF1-206ENST00000531480 KCNG3Q8TAE7 436 aa11.92□□□□□ -0.5
CPSF1-206ENST00000531480 PPP1R35Q8TAP8 253 aa11.92□□□□□ -0.5
CPSF1-206ENST00000531480 UPRTQ96BW1 309 aa11.92□□□□□ -0.5
CPSF1-206ENST00000531480 TM2D1Q9BX74 207 aa11.92□□□□□ -0.5
CPSF1-206ENST00000531480 CST11Q9H112 138 aa11.92□□□□□ -0.5
CPSF1-206ENST00000531480 NCOR1P1Q9H4R4 102 aa11.92□□□□□ -0.5
CPSF1-206ENST00000531480 C7orf69Q9H7B7 122 aa11.92□□□□□ -0.5
CPSF1-206ENST00000531480 UNKLQ9H9P5 680 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms