RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 GRIFINA4D1Z8 144 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 LRRC3CA6NJW4 275 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 HCRTR2O43614 444 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 PITX3O75364 302 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 CTSDP07339 412 aaPredicted RBP8.86□□□□□ -0.99
SPIDR-224ENST00000524126 FXYD4P59646 89 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 ACOT6Q3I5F7 207 aaPredicted RBP8.86□□□□□ -0.99
SPIDR-224ENST00000524126 RAB42Q8N4Z0 105 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 FAM160A2Q8N612 972 aaPredicted RBP8.86□□□□□ -0.99
SPIDR-224ENST00000524126 AGBL5Q8NDL9 886 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 ARRDC3Q96B67 414 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 VSIRQ9H7M9 311 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 TMEM106BQ9NUM4 274 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 CISD1Q9NZ45 108 aaKnown RBP8.86□□□□□ -0.99
SPIDR-224ENST00000524126 COA3Q9Y2R0 106 aaPredicted RBP8.86□□□□□ -0.99
SPIDR-224ENST00000524126 PHF3Q92576 2039 aaKnown RBP8.86□□□□□ -0.99
SPIDR-224ENST00000524126 IGLV1-36A0A0B4J1U3 117 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 ZNF320A2RRD8 509 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 SSSCA1O60232 199 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 HLA-HP01893 362 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 PPBPP02775 128 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 DUSP1P28562 367 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 MRPS34P82930 218 aaKnown RBP8.86□□□□□ -0.99
SPIDR-224ENST00000524126 GNMTQ14749 295 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 TMEM241Q24JQ0 296 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 CBLN3Q6UW01 205 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 ATG4DQ86TL0 474 aaPredicted RBP8.86□□□□□ -0.99
SPIDR-224ENST00000524126 ODF3L1Q8IXM7 274 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 GCNT2Q8N0V5 402 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 ZNF709Q8N972 641 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 OR5T1Q8NG75 326 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 OR51T1Q8NGJ9 327 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 SMIM7Q9BQ49 75 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 Q9N2K0 584 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 FAM60AQ9NP50 221 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 PRSS50Q9UI38 385 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 NXT1Q9UKK6 140 aaKnown RBP8.86□□□□□ -0.99
SPIDR-224ENST00000524126 WDFY4Q6ZS81 3184 aa8.86□□□□□ -0.99
SPIDR-224ENST00000524126 A0A1W2PNV4 684 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 MAP1LC3B2A6NCE7 125 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 SERINC4A6NH21 518 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 PROB1E7EW31 1015 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 FOXS1O43638 330 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 B3GALT2O43825 422 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 TSPAN2O60636 221 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 WISP1O95388 367 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 HBE1P02100 147 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 ANOS1P23352 680 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 SEC13P55735 322 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 PDGFRLQ15198 375 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 EMC4Q5J8M3 183 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 ZNF787Q6DD87 383 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 MEX3BQ6ZN04 569 aaKnown RBP8.85□□□□□ -0.99
SPIDR-224ENST00000524126 GRINAQ7Z429 371 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 OR11L1Q8NGX0 322 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 RPUSD4Q96CM3 377 aaKnown RBP8.85□□□□□ -0.99
SPIDR-224ENST00000524126 MAP1LC3BQ9GZQ8 125 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 ZNF703Q9H7S9 590 aaPredicted RBP8.85□□□□□ -0.99
SPIDR-224ENST00000524126 NAA60Q9H7X0 242 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 ZNF160Q9HCG1 818 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 TMEM9BQ9NQ34 198 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 MANBALQ9NQG1 85 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 RNF114Q9Y508 228 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 KNL1Q8NG31 2342 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 PRSS37A4D1T9 235 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 SHISA7A6NL88 538 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 C17orf51A8MQB3 221 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 CIDEAO60543 219 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 HRASP01112 189 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 TTRP02766 147 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 ISG15P05161 165 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 ATXN8OSP0DMR3 200 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 HOXB2P14652 356 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 RAC2P15153 192 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 RPL23P62829 140 aaKnown RBP8.85□□□□□ -0.99
SPIDR-224ENST00000524126 ZNF154Q13106 437 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 CD226Q15762 336 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 ACKR1Q16570 336 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 BSXQ3C1V8 233 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 SAXO1Q8IYX7 474 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 ZNF321PQ8N8H1 164 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 OR4C5Q8NGB2 326 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 CMTM2Q8TAZ6 248 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 RTN4IP1Q8WWV3 396 aaPredicted RBP8.85□□□□□ -0.99
SPIDR-224ENST00000524126 C18orf12Q96KH6 178 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 NUDT16L1Q9BRJ7 211 aaKnown RBP8.85□□□□□ -0.99
SPIDR-224ENST00000524126 ZNF552Q9H707 407 aaPredicted RBP8.85□□□□□ -0.99
SPIDR-224ENST00000524126 MCTS1Q9ULC4 181 aaKnown RBP8.85□□□□□ -0.99
SPIDR-224ENST00000524126 CLDN16Q9Y5I7 305 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 TRPM6Q9BX84 2022 aa8.85□□□□□ -0.99
SPIDR-224ENST00000524126 ZNF732B4DXR9 585 aa8.84□□□□□ -0.99
SPIDR-224ENST00000524126 TMEM225BP0DP42 221 aa8.84□□□□□ -0.99
SPIDR-224ENST00000524126 BLVRBP30043 206 aaPredicted RBP8.84□□□□□ -0.99
SPIDR-224ENST00000524126 LTBRP36941 435 aa8.84□□□□□ -0.99
SPIDR-224ENST00000524126 HINT1P49773 126 aaPredicted RBP8.84□□□□□ -0.99
SPIDR-224ENST00000524126 MYPOPQ86VE0 399 aaPredicted RBP8.84□□□□□ -0.99
SPIDR-224ENST00000524126 TMEM252Q8N6L7 170 aa8.84□□□□□ -0.99
SPIDR-224ENST00000524126 OR4D5Q8NGN0 318 aa8.84□□□□□ -0.99
SPIDR-224ENST00000524126 OR2T10Q8NGZ9 312 aa8.84□□□□□ -0.99
SPIDR-224ENST00000524126 KCNG3Q8TAE7 436 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms