RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 RHOXF1Q8NHV9 184 aa9.95□□□□□ -0.82
CSMD1-205ENST00000519623 COQ2Q96H96 371 aa9.95□□□□□ -0.82
CSMD1-205ENST00000519623 GAL3ST2Q9H3Q3 398 aa9.95□□□□□ -0.82
CSMD1-205ENST00000519623 A0A087X0M5 115 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 A0A1B0GX30 115 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 FAM172BPA6NC97 362 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 SNTNA6NMZ2 147 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 LEUTXA8MZ59 168 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 H3BUI4 141 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 DEGS1O15121 323 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 XPNPEP2O43895 674 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 PEX14O75381 377 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 ZFPL1O95159 310 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 OCM2P0CE71 109 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 OCMP0CE72 109 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-205ENST00000519623 TMEM225BP0DP42 221 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 ZNF44P15621 663 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 BRS3P32247 399 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 VDAC2P45880 294 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-205ENST00000519623 KPNB1Q14974 876 aaKnown RBP9.94□□□□□ -0.82
CSMD1-205ENST00000519623 KISS1Q15726 138 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 C17orf58Q2M2W7 97 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 TCTEX1D4Q5JR98 221 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 C16orf82Q7Z2V1 217 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 SERPINA12Q8IW75 414 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 SYS1Q8N2H4 156 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 PARP16Q8N5Y8 322 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 CHST4Q8NCG5 386 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 WFDC9Q8NEX5 89 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 OR4F17Q8NGA8 305 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 OR5AU1Q8NGC0 362 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 OR5D14Q8NGL3 314 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 ZNF596Q8TC21 504 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 STMN2Q93045 179 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 OR4F4Q96R69 305 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 SLC29A1Q99808 456 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 ALG8Q9BVK2 526 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 LIN7BQ9HAP6 207 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 ZNF286AQ9HBT8 521 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 AMBNQ9NP70 447 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 GMPPBQ9Y5P6 360 aa9.94□□□□□ -0.82
CSMD1-205ENST00000519623 BUB1B-PAK6H3BSN5 160 aa9.93□□□□□ -0.82
CSMD1-205ENST00000519623 SULT1B1O43704 296 aa9.93□□□□□ -0.82
CSMD1-205ENST00000519623 AMY1AP04745 511 aa9.93□□□□□ -0.82
CSMD1-205ENST00000519623 AMY2AP04746 511 aa9.93□□□□□ -0.82
CSMD1-205ENST00000519623 ALDOBP05062 364 aa9.93□□□□□ -0.82
CSMD1-205ENST00000519623 DBTP11182 482 aaKnown RBP9.93□□□□□ -0.82
CSMD1-205ENST00000519623 HLA-DRB5Q30154 266 aa9.93□□□□□ -0.82
CSMD1-205ENST00000519623 ARSJQ5FYB0 599 aaPredicted RBP9.93□□□□□ -0.82
CSMD1-205ENST00000519623 KRBOX4Q5JUW0 171 aa9.93□□□□□ -0.82
CSMD1-205ENST00000519623 ELP2Q6IA86 826 aa9.93□□□□□ -0.82
CSMD1-205ENST00000519623 ZNF529Q6P280 563 aa9.93□□□□□ -0.82
CSMD1-205ENST00000519623 ZFP1Q6P2D0 407 aa9.93□□□□□ -0.82
CSMD1-205ENST00000519623 MRPL48Q96GC5 212 aaKnown RBP9.93□□□□□ -0.82
CSMD1-205ENST00000519623 RBM14Q96PK6 669 aaKnown RBP9.93□□□□□ -0.82
CSMD1-205ENST00000519623 PDCD1LG2Q9BQ51 273 aa9.93□□□□□ -0.82
CSMD1-205ENST00000519623 PPIL3Q9H2H8 161 aaKnown RBP9.93□□□□□ -0.82
CSMD1-205ENST00000519623 NEK6Q9HC98 313 aa9.93□□□□□ -0.82
CSMD1-205ENST00000519623 MRPS18AQ9NVS2 196 aaKnown RBP9.93□□□□□ -0.82
CSMD1-205ENST00000519623 ERVK13-1Q9NX77 482 aa9.93□□□□□ -0.82
CSMD1-205ENST00000519623 ING3Q9NXR8 418 aa9.93□□□□□ -0.82
CSMD1-205ENST00000519623 PCDHGB5Q9Y5G0 923 aa9.93□□□□□ -0.82
CSMD1-205ENST00000519623 TRAV24A0A0B4J272 114 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 KBTBD11-OT1A0A1B0GTJ5 212 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 TMEM212A6NML5 194 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 ZNF729A6NN14 1252 aaPredicted RBP9.92□□□□□ -0.82
CSMD1-205ENST00000519623 TOR1AO14656 332 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 OR2F2O95006 317 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 FADS2O95864 444 aaKnown RBP9.92□□□□□ -0.82
CSMD1-205ENST00000519623 HCKP08631 526 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 RPSAP08865 295 aaKnown RBP9.92□□□□□ -0.82
CSMD1-205ENST00000519623 PTGFRP43088 359 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 MTNR1BP49286 362 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 PRRX1P54821 245 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 ATXN7L3Q14CW9 347 aaPredicted RBP9.92□□□□□ -0.82
CSMD1-205ENST00000519623 ABCA11PQ4W5N1 156 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 TPTE2P1Q5T6R2 138 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 ZNF691Q5VV52 312 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 REC114Q7Z4M0 266 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 CENPVQ7Z7K6 275 aaPredicted RBP9.92□□□□□ -0.82
CSMD1-205ENST00000519623 Q8NFD4 153 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 PXT1Q8NFP0 134 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 OR4D6Q8NGJ1 314 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 OR51T1Q8NGJ9 327 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 OR52I1Q8NGK6 324 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 OR5AK2Q8NH90 309 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 CREB3L1Q96BA8 519 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 Q96MT0 163 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 MYCBPQ99417 103 aaPredicted RBP9.92□□□□□ -0.82
CSMD1-205ENST00000519623 SLC25A33Q9BSK2 321 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 NCOR1P1Q9H4R4 102 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 LINC00574Q9H8X3 128 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 INPP5EQ9NRR6 644 aa9.92□□□□□ -0.82
CSMD1-205ENST00000519623 LOC100130705A0A1B0GUX0 176 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 A0A1W2PRX2 142 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 FAM90A18PA6NE21 464 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 FAM90A16PA6NEW6 464 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 FAM90A20PA6NIJ5 464 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 FAM90A9PA6NNJ1 464 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 FAM90A12PA8MX19 464 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms