RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 GOSR1O95249 250 aa12.83□□□□□ -0.35
SCLT1-209ENST00000511426 OR2H2O95918 312 aa12.83□□□□□ -0.35
SCLT1-209ENST00000511426 TSPAN5P62079 268 aa12.83□□□□□ -0.35
SCLT1-209ENST00000511426 SCGB2B2Q4G0G5 96 aa12.83□□□□□ -0.35
SCLT1-209ENST00000511426 CD276Q5ZPR3 534 aa12.83□□□□□ -0.35
SCLT1-209ENST00000511426 OR13C8Q8NGS7 320 aa12.83□□□□□ -0.35
SCLT1-209ENST00000511426 LINC01560Q8TB33 94 aa12.83□□□□□ -0.35
SCLT1-209ENST00000511426 LRRC29Q8WV35 223 aa12.83□□□□□ -0.35
SCLT1-209ENST00000511426 CNTNAP3BQ96NU0 1288 aa12.83□□□□□ -0.35
SCLT1-209ENST00000511426 CNTNAP3Q9BZ76 1288 aa12.83□□□□□ -0.35
SCLT1-209ENST00000511426 CHMP1AQ9HD42 196 aaPredicted RBP12.83□□□□□ -0.35
SCLT1-209ENST00000511426 EHFQ9NZC4 300 aa12.83□□□□□ -0.35
SCLT1-209ENST00000511426 ZNF581Q9P0T4 197 aa12.83□□□□□ -0.35
SCLT1-209ENST00000511426 PKD1L2Q7Z442 2459 aa12.83□□□□□ -0.36
SCLT1-209ENST00000511426 A0A0A6YYJ9 748 aa12.83□□□□□ -0.36
SCLT1-209ENST00000511426 B8ZZF3 427 aa12.83□□□□□ -0.36
SCLT1-209ENST00000511426 E7EQL1 145 aa12.83□□□□□ -0.36
SCLT1-209ENST00000511426 PYCARD-AS1I3L0S3 204 aa12.83□□□□□ -0.36
SCLT1-209ENST00000511426 SLC33A1O00400 549 aaPredicted RBP12.83□□□□□ -0.36
SCLT1-209ENST00000511426 LHBP01229 141 aa12.83□□□□□ -0.36
SCLT1-209ENST00000511426 PMP2P02689 132 aa12.83□□□□□ -0.36
SCLT1-209ENST00000511426 CSN2P05814 226 aa12.83□□□□□ -0.36
SCLT1-209ENST00000511426 TAS2R31P59538 309 aa12.83□□□□□ -0.36
SCLT1-209ENST00000511426 PAN3Q58A45 887 aaKnown RBP12.83□□□□□ -0.36
SCLT1-209ENST00000511426 ZNF880Q6PDB4 577 aa12.83□□□□□ -0.36
SCLT1-209ENST00000511426 ZNF826PQ6ZT77 177 aa12.83□□□□□ -0.36
SCLT1-209ENST00000511426 OR6F1Q8NGZ6 308 aa12.83□□□□□ -0.36
SCLT1-209ENST00000511426 PPP1R35Q8TAP8 253 aa12.83□□□□□ -0.36
SCLT1-209ENST00000511426 ITLN1Q8WWA0 313 aa12.83□□□□□ -0.36
SCLT1-209ENST00000511426 HDHD3Q9BSH5 251 aaPredicted RBP12.83□□□□□ -0.36
SCLT1-209ENST00000511426 OR51J1Q9H342 316 aa12.83□□□□□ -0.36
SCLT1-209ENST00000511426 Q9N2K0 584 aa12.83□□□□□ -0.36
SCLT1-209ENST00000511426 DECR2Q9NUI1 292 aa12.83□□□□□ -0.36
SCLT1-209ENST00000511426 UFSP2Q9NUQ7 469 aa12.83□□□□□ -0.36
SCLT1-209ENST00000511426 ZNF230Q9UIE0 474 aaPredicted RBP12.83□□□□□ -0.36
SCLT1-209ENST00000511426 HEATR1Q9H583 2144 aaKnown RBP12.82□□□□□ -0.36
SCLT1-209ENST00000511426 CREBL2O60519 120 aaPredicted RBP12.82□□□□□ -0.36
SCLT1-209ENST00000511426 HNRNPCP07910 306 aaKnown RBP eCLIP12.82□□□□□ -0.36
SCLT1-209ENST00000511426 IRF2P14316 349 aa12.82□□□□□ -0.36
SCLT1-209ENST00000511426 FPR2P25090 351 aa12.82□□□□□ -0.36
SCLT1-209ENST00000511426 GRNP28799 593 aaKnown RBP12.82□□□□□ -0.36
SCLT1-209ENST00000511426 BATF2Q8N1L9 274 aa12.82□□□□□ -0.36
SCLT1-209ENST00000511426 MED28Q9H204 178 aa12.82□□□□□ -0.36
SCLT1-209ENST00000511426 RNF7Q9UBF6 113 aa12.82□□□□□ -0.36
SCLT1-209ENST00000511426 LRRC30A6NM36 301 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 DEFB108AA8MXU0 73 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 CCNKO75909 580 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 RLN1P04808 185 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 OR5H8P0DN80 308 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 DUSP1P28562 367 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 GLP1RP43220 463 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 UQCRFS1P47985 274 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 SEC61A1P61619 476 aaKnown RBP12.81□□□□□ -0.36
SCLT1-209ENST00000511426 PDCD1Q15116 288 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 CDSNQ15517 529 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 ZNF672Q499Z4 452 aaPredicted RBP12.81□□□□□ -0.36
SCLT1-209ENST00000511426 ZNF626Q68DY1 528 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 DHRS11Q6UWP2 260 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 ZNF497Q6ZNH5 498 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 SLC36A1Q7Z2H8 476 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 PEG10Q86TG7 708 aaKnown RBP12.81□□□□□ -0.36
SCLT1-209ENST00000511426 C1orf87Q8N0U7 546 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 GCSAMQ8N6F7 178 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 LILRB1Q8NHL6 650 aaPredicted RBP12.81□□□□□ -0.36
SCLT1-209ENST00000511426 FAM222BQ8WU58 562 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 TMEM165Q9HC07 324 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 GCM1Q9NP62 436 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 ING3Q9NXR8 418 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 FLVCR2Q9UPI3 526 aa12.81□□□□□ -0.36
SCLT1-209ENST00000511426 HS3ST1O14792 307 aa12.8□□□□□ -0.36
SCLT1-209ENST00000511426 ZG16O60844 167 aa12.8□□□□□ -0.36
SCLT1-209ENST00000511426 ATPAF1Q5TC12 328 aaPredicted RBP12.8□□□□□ -0.36
SCLT1-209ENST00000511426 SLC35E4Q6ICL7 350 aa12.8□□□□□ -0.36
SCLT1-209ENST00000511426 MOGAT3Q86VF5 341 aa12.8□□□□□ -0.36
SCLT1-209ENST00000511426 RDH5Q92781 318 aa12.8□□□□□ -0.36
SCLT1-209ENST00000511426 TRAF4Q9BUZ4 470 aaPredicted RBP12.8□□□□□ -0.36
SCLT1-209ENST00000511426 WDR13Q9H1Z4 485 aa12.8□□□□□ -0.36
SCLT1-209ENST00000511426 DYNLRB1Q9NP97 96 aa12.8□□□□□ -0.36
SCLT1-209ENST00000511426 CISD1Q9NZ45 108 aaKnown RBP12.8□□□□□ -0.36
SCLT1-209ENST00000511426 DNAJB11Q9UBS4 358 aa12.8□□□□□ -0.36
SCLT1-209ENST00000511426 ZZEF1O43149 2961 aa12.8□□□□□ -0.36
SCLT1-209ENST00000511426 TRDCB7Z8K6 153 aa12.8□□□□□ -0.36
SCLT1-209ENST00000511426 MUC1P15941 1255 aaPredicted RBP12.8□□□□□ -0.36
SCLT1-209ENST00000511426 LOXP28300 417 aaPredicted RBP12.8□□□□□ -0.36
SCLT1-209ENST00000511426 IGFBP7Q16270 282 aa12.8□□□□□ -0.36
SCLT1-209ENST00000511426 ZNF660Q6AZW8 331 aaPredicted RBP12.8□□□□□ -0.36
SCLT1-209ENST00000511426 BRICD5Q6PL45 260 aa12.8□□□□□ -0.36
SCLT1-209ENST00000511426 SLC25A42Q86VD7 318 aa12.8□□□□□ -0.36
SCLT1-209ENST00000511426 OR4A4PQ8NGN8 299 aa12.8□□□□□ -0.36
SCLT1-209ENST00000511426 MRPL30Q8TCC3 161 aaKnown RBP12.8□□□□□ -0.36
SCLT1-209ENST00000511426 NCOR1P1Q9H4R4 102 aa12.8□□□□□ -0.36
SCLT1-209ENST00000511426 MBNL3Q9NUK0 354 aaKnown RBP12.8□□□□□ -0.36
SCLT1-209ENST00000511426 GPR132Q9UNW8 380 aa12.8□□□□□ -0.36
SCLT1-209ENST00000511426 PPP1R3CQ9UQK1 317 aa12.8□□□□□ -0.36
SCLT1-209ENST00000511426 WIPI2Q9Y4P8 454 aa12.8□□□□□ -0.36
SCLT1-209ENST00000511426 TMEM30CPA0ZSE6 113 aa12.79□□□□□ -0.36
SCLT1-209ENST00000511426 RFPL4AA6NLU0 287 aa12.79□□□□□ -0.36
SCLT1-209ENST00000511426 OR2AT4A6NND4 320 aa12.79□□□□□ -0.36
SCLT1-209ENST00000511426 RFPL4AL1F8VTS6 287 aa12.79□□□□□ -0.36
SCLT1-209ENST00000511426 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms