RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 C9JQL5 133 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 SCGB1D2O95969 90 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 CELA3BP08861 270 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 OR5AC1P0C628 307 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 CCL11P51671 97 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 MALLQ13021 153 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 TSC22D1Q15714 1073 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 ZNF766Q5HY98 468 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 C17orf78Q8N4C9 275 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 POM121L2Q96KW2 1035 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 FER1L6-AS2Q96M78 137 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 NECAP2Q9NVZ3 263 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 KLF13Q9Y2Y9 288 aaPredicted RBP12.44□□□□□ -0.42
DDX41-208ENST00000507955 DMXL2Q8TDJ6 3036 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 RPL36A-HNRNPH2H7BZ11 118 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 H7C2Y5 167 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 PDCD6O75340 191 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 ZNF728P0DKX0 622 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 HKR1P10072 659 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 WT1P19544 449 aaPredicted RBP12.44□□□□□ -0.42
DDX41-208ENST00000507955 ARL6IP1Q15041 203 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 SGPP2Q8IWX5 399 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 SMIM8Q96KF7 97 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 NRIP2Q9BQI9 281 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 RHOFQ9HBH0 211 aa12.44□□□□□ -0.42
DDX41-208ENST00000507955 TNRC6AQ8NDV7 1962 aaKnown RBP12.44□□□□□ -0.42
DDX41-208ENST00000507955 PQLC2LA1A4F0 135 aa12.43□□□□□ -0.42
DDX41-208ENST00000507955 NSUN5P2Q63ZY6 315 aa12.43□□□□□ -0.42
DDX41-208ENST00000507955 LYZL2Q7Z4W2 148 aa12.43□□□□□ -0.42
DDX41-208ENST00000507955 ZFP62Q8NB50 900 aaPredicted RBP12.43□□□□□ -0.42
DDX41-208ENST00000507955 WDYHV1Q96HA8 205 aa12.43□□□□□ -0.42
DDX41-208ENST00000507955 PARD6AQ9NPB6 346 aa12.43□□□□□ -0.42
DDX41-208ENST00000507955 ZNF391Q9UJN7 358 aa12.43□□□□□ -0.42
DDX41-208ENST00000507955 ZNF175Q9Y473 711 aa12.43□□□□□ -0.42
DDX41-208ENST00000507955 CRYM-AS1A6NIL9 109 aa12.43□□□□□ -0.42
DDX41-208ENST00000507955 AGPAT2O15120 278 aa12.43□□□□□ -0.42
DDX41-208ENST00000507955 RRP8O43159 456 aaKnown RBP12.43□□□□□ -0.42
DDX41-208ENST00000507955 CA11O75493 328 aa12.43□□□□□ -0.42
DDX41-208ENST00000507955 CD46P15529 392 aa12.43□□□□□ -0.42
DDX41-208ENST00000507955 PVALBP20472 110 aaPredicted RBP12.43□□□□□ -0.42
DDX41-208ENST00000507955 GGNBP1Q5YKI7 109 aa12.43□□□□□ -0.42
DDX41-208ENST00000507955 OR2T2Q6IF00 324 aa12.43□□□□□ -0.42
DDX41-208ENST00000507955 DHRS11Q6UWP2 260 aa12.43□□□□□ -0.42
DDX41-208ENST00000507955 RTN4IP1Q8WWV3 396 aaPredicted RBP12.43□□□□□ -0.42
DDX41-208ENST00000507955 SEC11CQ9BY50 192 aa12.43□□□□□ -0.42
DDX41-208ENST00000507955 SMIM3Q9BZL3 60 aa12.43□□□□□ -0.42
DDX41-208ENST00000507955 RCC2Q9P258 522 aaKnown RBP12.43□□□□□ -0.42
DDX41-208ENST00000507955 LSM5Q9Y4Y9 91 aaKnown RBP12.43□□□□□ -0.42
DDX41-208ENST00000507955 GVINP1Q7Z2Y8 2422 aa12.43□□□□□ -0.42
DDX41-208ENST00000507955 TRGV5A0A0B4J1U4 118 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 DIRAS3O95661 229 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 CTSDP07339 412 aaPredicted RBP12.42□□□□□ -0.42
DDX41-208ENST00000507955 SELEP16581 610 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 FUT3P21217 361 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 AADACP22760 399 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 HOXA4Q00056 320 aaPredicted RBP12.42□□□□□ -0.42
DDX41-208ENST00000507955 ABCA11PQ4W5N1 156 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 IL34Q6ZMJ4 242 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 EXTL1Q92935 676 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 ESRP2Q9H6T0 727 aaKnown RBP12.42□□□□□ -0.42
DDX41-208ENST00000507955 TAF9BQ9HBM6 251 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 MLXQ9UH92 298 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 CD300LBA8K4G0 201 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 ZNF724A8MTY0 619 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 FBXO24O75426 580 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 MED6O75586 246 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 SCTP09683 121 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 RPL35P42766 123 aaKnown RBP12.42□□□□□ -0.42
DDX41-208ENST00000507955 CAV2P51636 162 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 ERVS71-1P61550 626 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 CLN3Q13286 438 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 PPA1Q15181 289 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 RTL6Q6ICC9 239 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 MDP1Q86V88 176 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 ZDHHC23Q8IYP9 409 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 APOBEC3DQ96AK3 386 aaPredicted RBP12.42□□□□□ -0.42
DDX41-208ENST00000507955 SLC2A9Q9NRM0 540 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 C1orf123Q9NWV4 160 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 DNAJB11Q9UBS4 358 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 EDARQ9UNE0 448 aa12.42□□□□□ -0.42
DDX41-208ENST00000507955 SLC22A20A6NK97 555 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 HS3ST1O14792 307 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 RHBDL1O75783 438 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 CA6P23280 308 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 DTYMKP23919 212 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 SURF2Q15527 256 aaPredicted RBP12.41□□□□□ -0.42
DDX41-208ENST00000507955 NRN1LQ496H8 165 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 SHEQ5VZ18 495 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 TMEM268Q5VZI3 342 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 FDCSPQ8NFU4 85 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 NEK7Q8TDX7 302 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 BSCL2Q96G97 398 aaPredicted RBP12.41□□□□□ -0.42
DDX41-208ENST00000507955 CNTNAP3Q9BZ76 1288 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 CEP250Q9BV73 2442 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 MEX3AA1L020 520 aaKnown RBP12.41□□□□□ -0.42
DDX41-208ENST00000507955 CEACAM21Q3KPI0 293 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 ETV3LQ6ZN32 361 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 C20orf204Q6ZNR8 217 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 ZNF286AQ9HBT8 521 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 DECR2Q9NUI1 292 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms